CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 20 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp320S20delS838deldelAGT---575712777-2779

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp320S20delAGT---5757All0.000011
ORF1ab/nsp320S20delAGT---88B.10.000073
ORF1ab/nsp320S20delAGT---66B.1.1.70.000005
ORF1ab/nsp320S20delAGT---440.222222
ORF1ab/nsp320S20delAGT---33B.1.10.000054
ORF1ab/nsp320S20delAGT---33B.1.1.330.001263
ORF1ab/nsp320S20delAGT---33B.1.1770.00004
ORF1ab/nsp320S20delAGT---33B.1.4290.000071
ORF1ab/nsp320S20delAGT---33P.10.000047
ORF1ab/nsp320S20delAGT---22B.1.1.3150.016949
ORF1ab/nsp320S20delAGT---22B.1.1.3480.001592
ORF1ab/nsp320S20delAGT---22B.1.4240.016129
ORF1ab/nsp320S20delAGT---22N.60.014184
ORF1ab/nsp320S20delAGT---11AY.1030.000006
ORF1ab/nsp320S20delAGT---11AY.1110.000183
ORF1ab/nsp320S20delAGT---11AY.190.00114
ORF1ab/nsp320S20delAGT---11AY.400.000964
ORF1ab/nsp320S20delAGT---11AY.60.000041
ORF1ab/nsp320S20delAGT---11AY.680.000274
ORF1ab/nsp320S20delAGT---11AY.98.10.000048
ORF1ab/nsp320S20delAGT---11B.1.1.4160.000905
ORF1ab/nsp320S20delAGT---11B.1.1.460.004367
ORF1ab/nsp320S20delAGT---11B.1.1.700.000341
ORF1ab/nsp320S20delAGT---11B.1.177.510.004566
ORF1ab/nsp320S20delAGT---11B.1.5260.000024
ORF1ab/nsp320S20delAGT---11B.1.5610.000397
ORF1ab/nsp320S20delAGT---11B.1.621.10.000506
ORF1ab/nsp320S20delAGT---11B.570.015152
ORF1ab/nsp320S20delAGT---11P.1.150.000232