CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 196 & Codon = atT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3196M196IM1014InonsynatGatT169611170.6586083305-3307

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3196M196IatGatT11171696All0.000214
ORF1ab/nsp3196M196IatGatT330330C.370.038301
ORF1ab/nsp3196M196IatGatT29130AY.250.000174
ORF1ab/nsp3196M196IatGatT41118B.1.1.70.000037
ORF1ab/nsp3196M196IatGatT12105AY.290.000189
ORF1ab/nsp3196M196IatGatT101101AY.440.000615
ORF1ab/nsp3196M196IatGatT7174AY.30.000706
ORF1ab/nsp3196M196IatGatT5959B.1.5631
ORF1ab/nsp3196M196IatGatT5454B.1.1600.001684
ORF1ab/nsp3196M196IatGatT5252B.1.5170.022203
ORF1ab/nsp3196M196IatGatT2850AY.40.000044
ORF1ab/nsp3196M196IatGatT641B.1.4290.000141
ORF1ab/nsp3196M196IatGatT3440AY.1030.000211
ORF1ab/nsp3196M196IatGatT2038B.1.10.000363
ORF1ab/nsp3196M196IatGatT1638B.1.617.20.00006
ORF1ab/nsp3196M196IatGatT3636B.1.6090.017258
ORF1ab/nsp3196M196IatGatT1829B.1.20.000158
ORF1ab/nsp3196M196IatGatT1325B.10.000119
ORF1ab/nsp3196M196IatGatT2121B.1.1700.090517
ORF1ab/nsp3196M196IatGatT2020AY.1180.001253
ORF1ab/nsp3196M196IatGatT1120AY.430.000049
ORF1ab/nsp3196M196IatGatT1919B.1.36.290.009829
ORF1ab/nsp3196M196IatGatT1518AY.390.000371
ORF1ab/nsp3196M196IatGatT1313B.1.3620.020031
ORF1ab/nsp3196M196IatGatT89P.10.000126
ORF1ab/nsp3196M196IatGatT78AY.4.20.000152
ORF1ab/nsp3196M196IatGatT15AY.230.00007
ORF1ab/nsp3196M196IatGatT15AY.39.10.00004
ORF1ab/nsp3196M196IatGatT15B.1.360.000146
ORF1ab/nsp3196M196IatGatT34AY.1190.000106
ORF1ab/nsp3196M196IatGatT14AY.29.10.000221
ORF1ab/nsp3196M196IatGatT14AY.90.000068
ORF1ab/nsp3196M196IatGatT44B.1.4270.000202
ORF1ab/nsp3196M196IatGatT44C.37.10.010471
ORF1ab/nsp3196M196IatGatT230.111111
ORF1ab/nsp3196M196IatGatT23AY.1210.000271
ORF1ab/nsp3196M196IatGatT33AY.200.000117
ORF1ab/nsp3196M196IatGatT33AY.4.50.000322
ORF1ab/nsp3196M196IatGatT33AY.610.000314
ORF1ab/nsp3196M196IatGatT33AY.98.10.000145
ORF1ab/nsp3196M196IatGatT13B.1.1.3060.000438
ORF1ab/nsp3196M196IatGatT23B.1.5960.000174
ORF1ab/nsp3196M196IatGatT33B.1.6370.000219
ORF1ab/nsp3196M196IatGatT22AY.260.000057
ORF1ab/nsp3196M196IatGatT12AY.50.000021
ORF1ab/nsp3196M196IatGatT22AY.850.000854
ORF1ab/nsp3196M196IatGatT12B0.000128
ORF1ab/nsp3196M196IatGatT12B.1.1.4090.002833
ORF1ab/nsp3196M196IatGatT22B.1.1.5280.009615
ORF1ab/nsp3196M196IatGatT12B.1.2430.00007
ORF1ab/nsp3196M196IatGatT22B.1.3510.000059
ORF1ab/nsp3196M196IatGatT22B.1.5260.000047
ORF1ab/nsp3196M196IatGatT12C.160.00106
ORF1ab/nsp3196M196IatGatT11A0.000387
ORF1ab/nsp3196M196IatGatT11AY.1000.000046
ORF1ab/nsp3196M196IatGatT11AY.1110.000183
ORF1ab/nsp3196M196IatGatT11AY.4.30.000842
ORF1ab/nsp3196M196IatGatT11AY.450.000122
ORF1ab/nsp3196M196IatGatT11AY.470.000031
ORF1ab/nsp3196M196IatGatT11AY.5.40.000277
ORF1ab/nsp3196M196IatGatT11AY.520.000814
ORF1ab/nsp3196M196IatGatT11AY.7.20.000559
ORF1ab/nsp3196M196IatGatT11AY.750.000056
ORF1ab/nsp3196M196IatGatT11AY.830.001724
ORF1ab/nsp3196M196IatGatT11AY.870.000833
ORF1ab/nsp3196M196IatGatT11AY.920.000287
ORF1ab/nsp3196M196IatGatT11AY.950.000761
ORF1ab/nsp3196M196IatGatT11B.1.1.1340.011364
ORF1ab/nsp3196M196IatGatT11B.1.1.1740.003378
ORF1ab/nsp3196M196IatGatT11B.1.1.1890.001513
ORF1ab/nsp3196M196IatGatT11B.1.1.2160.00089
ORF1ab/nsp3196M196IatGatT11B.1.1.280.000311
ORF1ab/nsp3196M196IatGatT11B.1.1.2910.000742
ORF1ab/nsp3196M196IatGatT11B.1.1.3030.002762
ORF1ab/nsp3196M196IatGatT11B.1.1.3340.016393
ORF1ab/nsp3196M196IatGatT11B.1.1.5190.00004
ORF1ab/nsp3196M196IatGatT11B.1.1920.009259
ORF1ab/nsp3196M196IatGatT11B.1.2210.000071
ORF1ab/nsp3196M196IatGatT11B.1.4160.001269
ORF1ab/nsp3196M196IatGatT11B.1.4360.001029
ORF1ab/nsp3196M196IatGatT11B.1.5250.000113
ORF1ab/nsp3196M196IatGatT11D.20.000075
ORF1ab/nsp3196M196IatGatT11P.40.003802