CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 196 & Codon = atA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3196M196IM1014InonsynatGatA16965430.3201653305-3307

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3196M196IatGatA5431696All0.000104
ORF1ab/nsp3196M196IatGatA101130AY.250.000607
ORF1ab/nsp3196M196IatGatA66118B.1.1.70.000059
ORF1ab/nsp3196M196IatGatA93105AY.290.001467
ORF1ab/nsp3196M196IatGatA374AY.30.00003
ORF1ab/nsp3196M196IatGatA5555Y.10.705128
ORF1ab/nsp3196M196IatGatA2150AY.40.000033
ORF1ab/nsp3196M196IatGatA3541B.1.4290.000824
ORF1ab/nsp3196M196IatGatA540AY.1030.000031
ORF1ab/nsp3196M196IatGatA1838B.1.10.000327
ORF1ab/nsp3196M196IatGatA2138B.1.617.20.000079
ORF1ab/nsp3196M196IatGatA829B.1.20.00007
ORF1ab/nsp3196M196IatGatA2929B.1.5950.007568
ORF1ab/nsp3196M196IatGatA1225B.10.00011
ORF1ab/nsp3196M196IatGatA920AY.430.00004
ORF1ab/nsp3196M196IatGatA318AY.390.000074
ORF1ab/nsp3196M196IatGatA19P.10.000016
ORF1ab/nsp3196M196IatGatA18AY.4.20.000022
ORF1ab/nsp3196M196IatGatA55AY.1020.000133
ORF1ab/nsp3196M196IatGatA45AY.230.000279
ORF1ab/nsp3196M196IatGatA45AY.39.10.000158
ORF1ab/nsp3196M196IatGatA45B.1.360.000584
ORF1ab/nsp3196M196IatGatA14AY.1190.000035
ORF1ab/nsp3196M196IatGatA34AY.29.10.000662
ORF1ab/nsp3196M196IatGatA24AY.90.000135
ORF1ab/nsp3196M196IatGatA44AY.9.20.000147
ORF1ab/nsp3196M196IatGatA34B.1.1770.00004
ORF1ab/nsp3196M196IatGatA13AY.1210.000135
ORF1ab/nsp3196M196IatGatA33B.1.1.250.001706
ORF1ab/nsp3196M196IatGatA13B.1.5960.000087
ORF1ab/nsp3196M196IatGatA22AD.20.000438
ORF1ab/nsp3196M196IatGatA22AY.4.10.001475
ORF1ab/nsp3196M196IatGatA22AY.420.00008
ORF1ab/nsp3196M196IatGatA12AY.50.000021
ORF1ab/nsp3196M196IatGatA12B.1.1.4090.002833
ORF1ab/nsp3196M196IatGatA12B.1.2430.00007
ORF1ab/nsp3196M196IatGatA22B.1.36.220.002415
ORF1ab/nsp3196M196IatGatA22P.1.20.002312
ORF1ab/nsp3196M196IatGatA11A.270.001656
ORF1ab/nsp3196M196IatGatA11AY.1170.000085
ORF1ab/nsp3196M196IatGatA11AY.330.000067
ORF1ab/nsp3196M196IatGatA11AY.46.40.000165
ORF1ab/nsp3196M196IatGatA11AY.60.000041
ORF1ab/nsp3196M196IatGatA11AY.910.00073
ORF1ab/nsp3196M196IatGatA11B.1.1.2840.000107
ORF1ab/nsp3196M196IatGatA11B.1.1.5260.003546
ORF1ab/nsp3196M196IatGatA11B.1.2390.001221
ORF1ab/nsp3196M196IatGatA11B.1.2580.000067
ORF1ab/nsp3196M196IatGatA11B.1.36.100.004785
ORF1ab/nsp3196M196IatGatA11B.1.4330.003195
ORF1ab/nsp3196M196IatGatA11B.1.4990.00105
ORF1ab/nsp3196M196IatGatA11B.100.008264