CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1892 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31892A1892SA2710SnonsynGctTct575718393-8395

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31892A1892SGctTct5757All0.000011
ORF1ab/nsp31892A1892SGctTct1010B.1.1.70.000009
ORF1ab/nsp31892A1892SGctTct88AY.430.000035
ORF1ab/nsp31892A1892SGctTct77B.1.617.20.000026
ORF1ab/nsp31892A1892SGctTct55AY.1030.000031
ORF1ab/nsp31892A1892SGctTct33AY.270.000194
ORF1ab/nsp31892A1892SGctTct22AB.10.016393
ORF1ab/nsp31892A1892SGctTct22AY.40.000003
ORF1ab/nsp31892A1892SGctTct22B.1.1.2280.006098
ORF1ab/nsp31892A1892SGctTct11AY.1000.000046
ORF1ab/nsp31892A1892SGctTct11AY.1020.000027
ORF1ab/nsp31892A1892SGctTct11AY.1060.000335
ORF1ab/nsp31892A1892SGctTct11AY.120.000316
ORF1ab/nsp31892A1892SGctTct11AY.230.00007
ORF1ab/nsp31892A1892SGctTct11AY.290.000016
ORF1ab/nsp31892A1892SGctTct11AY.660.00107
ORF1ab/nsp31892A1892SGctTct11AY.80.000606
ORF1ab/nsp31892A1892SGctTct11B.1.1770.000013
ORF1ab/nsp31892A1892SGctTct11B.1.177.160.000664
ORF1ab/nsp31892A1892SGctTct11B.1.20.000009
ORF1ab/nsp31892A1892SGctTct11B.1.2060.000816
ORF1ab/nsp31892A1892SGctTct11B.1.3510.00003
ORF1ab/nsp31892A1892SGctTct11B.1.3970.004854
ORF1ab/nsp31892A1892SGctTct11B.1.4290.000024
ORF1ab/nsp31892A1892SGctTct11B.1.4530.003236
ORF1ab/nsp31892A1892SGctTct11P.10.000016
ORF1ab/nsp31892A1892SGctTct11Q.80.000165