CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1878 & Codon = Tcg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31878A1878SA2696SnonsynGcgTcg60590.9833338351-8353

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31878A1878SGcgTcg5960All0.000011
ORF1ab/nsp31878A1878SGcgTcg1010AY.40.000016
ORF1ab/nsp31878A1878SGcgTcg99AY.430.00004
ORF1ab/nsp31878A1878SGcgTcg88B.1.1.70.000007
ORF1ab/nsp31878A1878SGcgTcg66P.10.000095
ORF1ab/nsp31878A1878SGcgTcg44AY.1030.000025
ORF1ab/nsp31878A1878SGcgTcg33B.1.10.000054
ORF1ab/nsp31878A1878SGcgTcg33D.20.000225
ORF1ab/nsp31878A1878SGcgTcg22AY.46.50.000397
ORF1ab/nsp31878A1878SGcgTcg22AY.60.000082
ORF1ab/nsp31878A1878SGcgTcg22B.10.000018
ORF1ab/nsp31878A1878SGcgTcg12B.1.1.5190.00004
ORF1ab/nsp31878A1878SGcgTcg22B.1.617.20.000008
ORF1ab/nsp31878A1878SGcgTcg11AW.10.003049
ORF1ab/nsp31878A1878SGcgTcg11AY.140.000088
ORF1ab/nsp31878A1878SGcgTcg11AY.30.00001
ORF1ab/nsp31878A1878SGcgTcg11AY.4.20.000022
ORF1ab/nsp31878A1878SGcgTcg11B.1.20.000009
ORF1ab/nsp31878A1878SGcgTcg11B.1.4290.000024
ORF1ab/nsp31878A1878SGcgTcg11B.1.5820.000491