CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1872 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31872A1872VA2690VnonsyngCtgTt2177217718333-8335

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31872A1872VgCtgTt21772177All0.000416
ORF1ab/nsp31872A1872VgCtgTt218218B.1.617.20.000821
ORF1ab/nsp31872A1872VgCtgTt178178B.1.1.70.000159
ORF1ab/nsp31872A1872VgCtgTt177177B.1.20.001559
ORF1ab/nsp31872A1872VgCtgTt142142B.1.5440.855422
ORF1ab/nsp31872A1872VgCtgTt122122B.1.2210.008666
ORF1ab/nsp31872A1872VgCtgTt118118B.1.4800.293532
ORF1ab/nsp31872A1872VgCtgTt108108AY.1000.004969
ORF1ab/nsp31872A1872VgCtgTt107107AY.40.000167
ORF1ab/nsp31872A1872VgCtgTt8989B.1.3960.062809
ORF1ab/nsp31872A1872VgCtgTt6969B.10.000632
ORF1ab/nsp31872A1872VgCtgTt5959AY.260.00167
ORF1ab/nsp31872A1872VgCtgTt4848AY.46.60.003466
ORF1ab/nsp31872A1872VgCtgTt4343B.1.1.250.024446
ORF1ab/nsp31872A1872VgCtgTt3737B.1.10.000671
ORF1ab/nsp31872A1872VgCtgTt3434AY.250.000205
ORF1ab/nsp31872A1872VgCtgTt3030B.1.428.21
ORF1ab/nsp31872A1872VgCtgTt2828AY.460.002914
ORF1ab/nsp31872A1872VgCtgTt2626B.1.1.390.013252
ORF1ab/nsp31872A1872VgCtgTt2525AY.1030.000155
ORF1ab/nsp31872A1872VgCtgTt2424AU.10.03038
ORF1ab/nsp31872A1872VgCtgTt2121B.1.1.3170.008646
ORF1ab/nsp31872A1872VgCtgTt1919B.1.1.630.00733
ORF1ab/nsp31872A1872VgCtgTt1818AY.440.00011
ORF1ab/nsp31872A1872VgCtgTt1818B.1.3510.000535
ORF1ab/nsp31872A1872VgCtgTt1717AY.980.001343
ORF1ab/nsp31872A1872VgCtgTt1616AY.30.000159
ORF1ab/nsp31872A1872VgCtgTt1515AY.430.000066
ORF1ab/nsp31872A1872VgCtgTt1515B.1.2400.003233
ORF1ab/nsp31872A1872VgCtgTt1515P.1.170.002426
ORF1ab/nsp31872A1872VgCtgTt1313B.1.160.200.116071
ORF1ab/nsp31872A1872VgCtgTt1313B.1.1770.000171
ORF1ab/nsp31872A1872VgCtgTt1313P.10.000205
ORF1ab/nsp31872A1872VgCtgTt1212B0.001534
ORF1ab/nsp31872A1872VgCtgTt1111AY.50.000227
ORF1ab/nsp31872A1872VgCtgTt1111B.1.1.3370.039568
ORF1ab/nsp31872A1872VgCtgTt1010B.1.5260.000235
ORF1ab/nsp31872A1872VgCtgTt99AY.1020.000239
ORF1ab/nsp31872A1872VgCtgTt99B.1.1.2940.011392
ORF1ab/nsp31872A1872VgCtgTt88B.1.4290.000188
ORF1ab/nsp31872A1872VgCtgTt88B.1.6350.140351
ORF1ab/nsp31872A1872VgCtgTt77AY.290.00011
ORF1ab/nsp31872A1872VgCtgTt66AM.40.021429
ORF1ab/nsp31872A1872VgCtgTt66AY.1200.000223
ORF1ab/nsp31872A1872VgCtgTt66B.1.258.170.000624
ORF1ab/nsp31872A1872VgCtgTt66B.1.5960.000523
ORF1ab/nsp31872A1872VgCtgTt66R.10.00054
ORF1ab/nsp31872A1872VgCtgTt55B.1.1.3160.004625
ORF1ab/nsp31872A1872VgCtgTt55B.1.438.10.000536
ORF1ab/nsp31872A1872VgCtgTt44AY.330.000267
ORF1ab/nsp31872A1872VgCtgTt44AY.470.000124
ORF1ab/nsp31872A1872VgCtgTt44B.1.1590.04878
ORF1ab/nsp31872A1872VgCtgTt44B.1.5760.003626
ORF1ab/nsp31872A1872VgCtgTt44B.1.6370.000292
ORF1ab/nsp31872A1872VgCtgTt44N.40.017021
ORF1ab/nsp31872A1872VgCtgTt33AY.190.003421
ORF1ab/nsp31872A1872VgCtgTt33AY.230.000209
ORF1ab/nsp31872A1872VgCtgTt33AY.270.000194
ORF1ab/nsp31872A1872VgCtgTt33AY.4.50.000322
ORF1ab/nsp31872A1872VgCtgTt33B.1.1.2140.000166
ORF1ab/nsp31872A1872VgCtgTt33B.1.1.2220.000612
ORF1ab/nsp31872A1872VgCtgTt33B.1.1.2980.002586
ORF1ab/nsp31872A1872VgCtgTt33B.1.1.3110.001074
ORF1ab/nsp31872A1872VgCtgTt33B.1.1.4340.001046
ORF1ab/nsp31872A1872VgCtgTt33B.1.1.5190.000119
ORF1ab/nsp31872A1872VgCtgTt33B.1.2580.0002
ORF1ab/nsp31872A1872VgCtgTt33B.1.6190.002613
ORF1ab/nsp31872A1872VgCtgTt22A.30.004193
ORF1ab/nsp31872A1872VgCtgTt22AY.1190.000071
ORF1ab/nsp31872A1872VgCtgTt22AY.160.000759
ORF1ab/nsp31872A1872VgCtgTt22AY.23.10.000835
ORF1ab/nsp31872A1872VgCtgTt22AY.320.001065
ORF1ab/nsp31872A1872VgCtgTt22AY.350.000466
ORF1ab/nsp31872A1872VgCtgTt22AY.4.20.000043
ORF1ab/nsp31872A1872VgCtgTt22AY.450.000243
ORF1ab/nsp31872A1872VgCtgTt22AY.500.001599
ORF1ab/nsp31872A1872VgCtgTt22AY.60.000082
ORF1ab/nsp31872A1872VgCtgTt22AY.750.000112
ORF1ab/nsp31872A1872VgCtgTt22AY.90.000135
ORF1ab/nsp31872A1872VgCtgTt22B.1.1.2250.014388
ORF1ab/nsp31872A1872VgCtgTt22B.1.1.2840.000215
ORF1ab/nsp31872A1872VgCtgTt22B.1.1.4200.002012
ORF1ab/nsp31872A1872VgCtgTt22B.1.1600.000062
ORF1ab/nsp31872A1872VgCtgTt22B.1.177.170.001642
ORF1ab/nsp31872A1872VgCtgTt22B.1.177.60.001953
ORF1ab/nsp31872A1872VgCtgTt22B.1.177.810.000379
ORF1ab/nsp31872A1872VgCtgTt22B.1.177.830.002963
ORF1ab/nsp31872A1872VgCtgTt22B.1.2220.003384
ORF1ab/nsp31872A1872VgCtgTt22B.1.2340.000264
ORF1ab/nsp31872A1872VgCtgTt22B.1.36.80.002
ORF1ab/nsp31872A1872VgCtgTt22B.1.4270.000101
ORF1ab/nsp31872A1872VgCtgTt22B.1.4710.005464
ORF1ab/nsp31872A1872VgCtgTt22B.1.6210.000177
ORF1ab/nsp31872A1872VgCtgTt22C.370.000232
ORF1ab/nsp31872A1872VgCtgTt22D.20.00015
ORF1ab/nsp31872A1872VgCtgTt11AD.20.000219
ORF1ab/nsp31872A1872VgCtgTt11AY.1010.00049
ORF1ab/nsp31872A1872VgCtgTt11AY.1060.000335
ORF1ab/nsp31872A1872VgCtgTt11AY.1170.000085
ORF1ab/nsp31872A1872VgCtgTt11AY.1180.000063
ORF1ab/nsp31872A1872VgCtgTt11AY.140.000088
ORF1ab/nsp31872A1872VgCtgTt11AY.240.000431
ORF1ab/nsp31872A1872VgCtgTt11AY.3.10.000085
ORF1ab/nsp31872A1872VgCtgTt11AY.34.10.00051
ORF1ab/nsp31872A1872VgCtgTt11AY.400.000964
ORF1ab/nsp31872A1872VgCtgTt11AY.46.50.000198
ORF1ab/nsp31872A1872VgCtgTt11AY.5.30.000337
ORF1ab/nsp31872A1872VgCtgTt11AY.540.000095
ORF1ab/nsp31872A1872VgCtgTt11AY.550.000917
ORF1ab/nsp31872A1872VgCtgTt11AY.590.00053
ORF1ab/nsp31872A1872VgCtgTt11AY.610.000105
ORF1ab/nsp31872A1872VgCtgTt11AY.620.000436
ORF1ab/nsp31872A1872VgCtgTt11AY.650.000533
ORF1ab/nsp31872A1872VgCtgTt11AY.710.000475
ORF1ab/nsp31872A1872VgCtgTt11AY.720.001361
ORF1ab/nsp31872A1872VgCtgTt11AY.75.10.00018
ORF1ab/nsp31872A1872VgCtgTt11AY.810.001992
ORF1ab/nsp31872A1872VgCtgTt11AY.9.10.000084
ORF1ab/nsp31872A1872VgCtgTt11AY.9.20.000037
ORF1ab/nsp31872A1872VgCtgTt11AY.98.10.000048
ORF1ab/nsp31872A1872VgCtgTt11AZ.50.003509
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.1710.003676
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.1810.004545
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.2160.00089
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.280.000311
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.2910.000742
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.3060.000438
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.3150.008475
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.330.000421
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.3680.003086
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.4090.002833
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.4480.002033
ORF1ab/nsp31872A1872VgCtgTt11B.1.1.450.014085
ORF1ab/nsp31872A1872VgCtgTt11B.1.177.210.000076
ORF1ab/nsp31872A1872VgCtgTt11B.1.177.570.000281
ORF1ab/nsp31872A1872VgCtgTt11B.1.177.710.010101
ORF1ab/nsp31872A1872VgCtgTt11B.1.2390.001221
ORF1ab/nsp31872A1872VgCtgTt11B.1.2430.00007
ORF1ab/nsp31872A1872VgCtgTt11B.1.258.70.001912
ORF1ab/nsp31872A1872VgCtgTt11B.1.3050.002151
ORF1ab/nsp31872A1872VgCtgTt11B.1.36.370.002778
ORF1ab/nsp31872A1872VgCtgTt11B.1.3690.000285
ORF1ab/nsp31872A1872VgCtgTt11B.1.3820.008929
ORF1ab/nsp31872A1872VgCtgTt11B.1.4160.001269
ORF1ab/nsp31872A1872VgCtgTt11B.1.4240.008065
ORF1ab/nsp31872A1872VgCtgTt11B.1.466.20.000391
ORF1ab/nsp31872A1872VgCtgTt11B.1.4990.00105
ORF1ab/nsp31872A1872VgCtgTt11B.1.5210.004975
ORF1ab/nsp31872A1872VgCtgTt11B.1.5770.000687
ORF1ab/nsp31872A1872VgCtgTt11B.1.5800.004065
ORF1ab/nsp31872A1872VgCtgTt11B.1.5900.004545
ORF1ab/nsp31872A1872VgCtgTt11B.1.5990.00365
ORF1ab/nsp31872A1872VgCtgTt11B.1.6230.000536
ORF1ab/nsp31872A1872VgCtgTt11B.1.6270.00202
ORF1ab/nsp31872A1872VgCtgTt11B.200.023256
ORF1ab/nsp31872A1872VgCtgTt11Q.30.000145