CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1853 | N1853N | N2671N | syn | aaT | aaC | 806 | 806 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853del | N2671del | del | AAT | --- | 79 | 79 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853Y | N2671Y | nonsyn | Aat | Tat | 40 | 37 | 0.925 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853Y | N2671Y | nonsyn | AaT | TaC | 40 | 3 | 0.075 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853del1 | N2671del1 | del | Aat | -at | 8 | 7 | 0.875 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853del1 | N2671del1 | del | AAt | -Rt | 8 | 1 | 0.125 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853S | N2671S | nonsyn | aAt | aGt | 6 | 6 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853I | N2671I | nonsyn | aAt | aTt | 5 | 3 | 0.6 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853I | N2671I | nonsyn | aAT | aTA | 5 | 2 | 0.4 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853D | N2671D | nonsyn | Aat | Gat | 4 | 4 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853K | N2671K | nonsyn | aaT | aaA | 4 | 4 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853X | N2671X | nonsyn | AaT | TaA | 4 | 3 | 0.75 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853X | N2671X | nonsyn | AAT | TGA | 4 | 1 | 0.25 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853C | N2671C | nonsyn | AAt | TGt | 3 | 3 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853H | N2671H | nonsyn | Aat | Cat | 2 | 2 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853R | N2671R | nonsyn | AAt | CGt | 2 | 1 | 0.5 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853R | N2671R | nonsyn | aAT | aGA | 2 | 1 | 0.5 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853del2 | N2671del2 | del | AAT | --N | 1 | 1 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853F | N2671F | nonsyn | AAt | TTt | 1 | 1 | 1 | 8276-8278 |
ORF1ab/nsp3 | 1853 | N1853L | N2671L | nonsyn | AAT | TTA | 1 | 1 | 1 | 8276-8278 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 806 | 806 | All | 0.000154 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 280 | 280 | AY.43 | 0.001241 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 135 | 135 | C.26 | 0.992647 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 89 | 89 | AY.4 | 0.000139 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 87 | 87 | B.1.1.7 | 0.000078 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 79 | 79 | All | 0.000015 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 37 | 40 | All | 0.000007 |
ORF1ab/nsp3 | 1853 | N1853Y | AaT | TaC | 3 | 40 | All | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 28 | 28 | AY.103 | 0.000174 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 26 | 26 | B.1.1.7 | 0.000023 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 18 | 18 | AY.3 | 0.000179 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 14 | 14 | B.1.332 | 0.048951 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 13 | 13 | AY.119 | 0.000459 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 13 | 13 | B.1 | 0.000119 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 11 | 11 | B.1.617.2 | 0.000041 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 10 | 10 | B | 0.001278 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 9 | 9 | AY.44 | 0.000055 |
ORF1ab/nsp3 | 1853 | N1853del1 | Aat | -at | 7 | 8 | All | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853del1 | AAt | -Rt | 1 | 8 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 8 | 8 | B.1 | 0.000073 |
ORF1ab/nsp3 | 1853 | N1853S | aAt | aGt | 6 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 6 | 6 | AY.29 | 0.000095 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 6 | 6 | AY.47 | 0.000187 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 6 | 6 | AY.73 | 0.003992 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 6 | 6 | B.1.1 | 0.000109 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 6 | 6 | P.1 | 0.000095 |
ORF1ab/nsp3 | 1853 | N1853I | aAt | aTt | 3 | 5 | All | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853I | aAT | aTA | 2 | 5 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 5 | 5 | AY.20 | 0.000194 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 5 | 5 | B.1.1 | 0.000091 |
ORF1ab/nsp3 | 1853 | N1853K | aaT | aaA | 4 | 4 | 0.222222 | |
ORF1ab/nsp3 | 1853 | N1853X | AaT | TaA | 3 | 4 | 0.166667 | |
ORF1ab/nsp3 | 1853 | N1853X | AAT | TGA | 1 | 4 | 0.055556 | |
ORF1ab/nsp3 | 1853 | N1853D | Aat | Gat | 4 | 4 | All | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853K | aaT | aaA | 4 | 4 | All | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853X | AaT | TaA | 3 | 4 | All | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853X | AAT | TGA | 1 | 4 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 4 | 4 | AY.4.2 | 0.000087 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 4 | 4 | AY.4.5 | 0.00043 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 4 | 4 | B | 0.000511 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 4 | 4 | B.1.1.1 | 0.001307 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 3 | 3 | 0.166667 | |
ORF1ab/nsp3 | 1853 | N1853Y | AaT | TaC | 2 | 3 | A.2.4 | 0.006734 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 3 | A.2.4 | 0.003367 |
ORF1ab/nsp3 | 1853 | N1853C | AAt | TGt | 3 | 3 | All | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 3 | 3 | AY.102 | 0.00008 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 3 | 3 | AY.46.2 | 0.001906 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 3 | 3 | AY.69 | 0.00056 |
ORF1ab/nsp3 | 1853 | N1853D | Aat | Gat | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 3 | 3 | B.1.160.31 | 0.024194 |
ORF1ab/nsp3 | 1853 | N1853I | aAt | aTt | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 1853 | N1853I | aAT | aTA | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 1853 | N1853H | Aat | Cat | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853R | aAT | aGA | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853R | AAt | CGt | 1 | 2 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | B.1.1.163 | 0.015267 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp3 | 1853 | N1853S | aAt | aGt | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 2 | 2 | B.1.177.16 | 0.001329 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | C.35 | 0.001548 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | C.36 | 0.001821 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 1853 | N1853R | aAT | aGA | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1853 | N1853L | AAT | TTA | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1853 | N1853F | AAt | TTt | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1853 | N1853S | aAt | aGt | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1853 | N1853C | AAt | TGt | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1853 | N1853S | aAt | aGt | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp3 | 1853 | N1853del2 | AAT | --N | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853L | AAT | TTA | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853F | AAt | TTt | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 1853 | N1853C | AAt | TGt | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 1853 | N1853del1 | AAt | -Rt | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 1853 | N1853S | aAt | aGt | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 1853 | N1853D | Aat | Gat | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 1853 | N1853Y | AaT | TaC | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1853 | N1853S | aAt | aGt | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | AY.81 | 0.001992 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 1853 | N1853del1 | Aat | -at | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1853 | N1853H | Aat | Cat | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.1.159 | 0.004673 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | B.1.1.184 | 0.058824 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 1853 | N1853del1 | Aat | -at | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 1853 | N1853C | AAt | TGt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853R | AAt | CGt | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | B.1.170 | 0.00431 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 1853 | N1853H | Aat | Cat | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.177.54 | 0.000606 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.177.63 | 0.002703 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.177.9 | 0.001332 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1853 | N1853del1 | Aat | -at | 1 | 1 | B.1.326 | 0.007576 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp3 | 1853 | N1853del1 | Aat | -at | 1 | 1 | B.1.382 | 0.008929 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.516 | 0.001957 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 1853 | N1853del1 | Aat | -at | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp3 | 1853 | N1853del1 | Aat | -at | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1853 | N1853I | aAt | aTt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1853 | N1853del1 | Aat | -at | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | C.17 | 0.055556 |
ORF1ab/nsp3 | 1853 | N1853I | aAT | aTA | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp3 | 1853 | N1853I | aAt | aTt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | N.6 | 0.007092 |
ORF1ab/nsp3 | 1853 | N1853del2 | AAT | --N | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 1853 | N1853N | aaT | aaC | 1 | 1 | P.1.7 | 0.000319 |
ORF1ab/nsp3 | 1853 | N1853del | AAT | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp3 | 1853 | N1853Y | Aat | Tat | 1 | 1 | S.1 | 0.00495 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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