CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1841

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31841H1841YH2659YnonsynCatTat5070507018240-8242
ORF1ab/nsp31841H1841HH2659HsyncaTcaC44544518240-8242
ORF1ab/nsp31841H1841delH2659deldelCAT---858518240-8242
ORF1ab/nsp31841H1841RH2659RnonsyncAtcGt535318240-8242
ORF1ab/nsp31841H1841QH2659QnonsyncaTcaG37250.6756768240-8242
ORF1ab/nsp31841H1841QH2659QnonsyncaTcaA37120.3243248240-8242
ORF1ab/nsp31841H1841NH2659NnonsynCatAat171718240-8242
ORF1ab/nsp31841H1841PH2659PnonsyncAtcCt650.8333338240-8242
ORF1ab/nsp31841H1841PH2659PnonsyncATcCC610.1666678240-8242
ORF1ab/nsp31841H1841LH2659LnonsyncAtcTt4418240-8242
ORF1ab/nsp31841H1841del1H2659del1delcaTca-3318240-8242
ORF1ab/nsp31841H1841KH2659KnonsynCaTAaA1118240-8242
ORF1ab/nsp31841H1841TH2659TnonsynCAtACt1118240-8242
ORF1ab/nsp31841H1841del2H2659del2delCAt--t1118240-8242
ORF1ab/nsp31841H1841IH2659InonsynCAtATt1118240-8242

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31841H1841YCatTat50705070All0.00097
ORF1ab/nsp31841H1841YCatTat12341234B.1.1.70.001105
ORF1ab/nsp31841H1841YCatTat918918AY.430.004067
ORF1ab/nsp31841H1841HcaTcaC445445All0.000085
ORF1ab/nsp31841H1841YCatTat368368AY.1130.052399
ORF1ab/nsp31841H1841YCatTat294294AY.98.10.014239
ORF1ab/nsp31841H1841YCatTat285285B.1.617.20.001073
ORF1ab/nsp31841H1841YCatTat185185B.1.1.1210.449029
ORF1ab/nsp31841H1841YCatTat157157B.1.20.001382
ORF1ab/nsp31841H1841YCatTat155155AY.40.000241
ORF1ab/nsp31841H1841HcaTcaC145145AY.1030.0009
ORF1ab/nsp31841H1841delCAT---8585All0.000016
ORF1ab/nsp31841H1841YCatTat7878AY.1030.000484
ORF1ab/nsp31841H1841YCatTat7171AY.440.000432
ORF1ab/nsp31841H1841YCatTat6969B.1.1770.000909
ORF1ab/nsp31841H1841YCatTat6666AY.250.000397
ORF1ab/nsp31841H1841YCatTat6464B.1.4290.001506
ORF1ab/nsp31841H1841HcaTcaC5555AY.180.555556
ORF1ab/nsp31841H1841RcAtcGt5353All0.00001
ORF1ab/nsp31841H1841YCatTat5151AY.1050.032797
ORF1ab/nsp31841H1841YCatTat4949B.1.1.5190.001946
ORF1ab/nsp31841H1841YCatTat4646B.10.000421
ORF1ab/nsp31841H1841YCatTat4444AY.200.00171
ORF1ab/nsp31841H1841YCatTat4141AY.30.000408
ORF1ab/nsp31841H1841HcaTcaC4141B.1.1.70.000037
ORF1ab/nsp31841H1841QcaTcaG2537All0.000005
ORF1ab/nsp31841H1841QcaTcaA1237All0.000002
ORF1ab/nsp31841H1841YCatTat3636AY.1020.000955
ORF1ab/nsp31841H1841YCatTat3636P.1.150.008364
ORF1ab/nsp31841H1841HcaTcaC3333AY.250.000198
ORF1ab/nsp31841H1841YCatTat2828B.1.10.000508
ORF1ab/nsp31841H1841delCAT---2626B.1.1.70.000023
ORF1ab/nsp31841H1841YCatTat2424AY.260.000679
ORF1ab/nsp31841H1841YCatTat2323AY.50.000475
ORF1ab/nsp31841H1841YCatTat2323B.1.1.2690.031123
ORF1ab/nsp31841H1841YCatTat2323P.10.000362
ORF1ab/nsp31841H1841RcAtcGt2222B.1.1.70.00002
ORF1ab/nsp31841H1841YCatTat2121AY.340.002036
ORF1ab/nsp31841H1841HcaTcaC2121B.1.617.20.000079
ORF1ab/nsp31841H1841YCatTat1919AY.390.00047
ORF1ab/nsp31841H1841YCatTat1818AY.330.001202
ORF1ab/nsp31841H1841NCatAat1717All0.000003
ORF1ab/nsp31841H1841YCatTat1717B.1.6090.00815
ORF1ab/nsp31841H1841YCatTat1616AY.39.10.000634
ORF1ab/nsp31841H1841YCatTat1616B.1.1.3060.007014
ORF1ab/nsp31841H1841YCatTat1616B.1.1.3170.006587
ORF1ab/nsp31841H1841HcaTcaC1313AY.3.10.001108
ORF1ab/nsp31841H1841YCatTat1313B.1.1600.000405
ORF1ab/nsp31841H1841YCatTat1313B.1.5090.011255
ORF1ab/nsp31841H1841YCatTat1212AY.1000.000552
ORF1ab/nsp31841H1841YCatTat1212AY.290.000189
ORF1ab/nsp31841H1841YCatTat1212AY.460.001249
ORF1ab/nsp31841H1841YCatTat1212B.1.4270.000606
ORF1ab/nsp31841H1841YCatTat1111A.2.50.005489
ORF1ab/nsp31841H1841delCAT---1111B.1.177.600.002403
ORF1ab/nsp31841H1841HcaTcaC1111B.1.20.000097
ORF1ab/nsp31841H1841YCatTat1010AY.1170.000845
ORF1ab/nsp31841H1841YCatTat1010B.1.5210.049751
ORF1ab/nsp31841H1841YCatTat1010C.350.00774
ORF1ab/nsp31841H1841HcaTcaC99AY.40.000014
ORF1ab/nsp31841H1841YCatTat99AY.4.20.000195
ORF1ab/nsp31841H1841HcaTcaC99AY.98.10.000436
ORF1ab/nsp31841H1841QcaTcaA59B.1.1.70.000004
ORF1ab/nsp31841H1841QcaTcaG49B.1.1.70.000004
ORF1ab/nsp31841H1841YCatTat99Q.10.001137
ORF1ab/nsp31841H1841YCatTat99Q.40.004093
ORF1ab/nsp31841H1841YCatTat88AY.230.000558
ORF1ab/nsp31841H1841HcaTcaC88AY.440.000049
ORF1ab/nsp31841H1841YCatTat88AY.9.10.00067
ORF1ab/nsp31841H1841YCatTat88AY.950.006088
ORF1ab/nsp31841H1841YCatTat88B.1.1.280.00249
ORF1ab/nsp31841H1841HcaTcaC88B.1.177.830.011852
ORF1ab/nsp31841H1841YCatTat88B.1.5260.000188
ORF1ab/nsp31841H1841YCatTat77AY.540.000667
ORF1ab/nsp31841H1841YCatTat77AY.590.003708
ORF1ab/nsp31841H1841YCatTat77AY.610.000733
ORF1ab/nsp31841H1841YCatTat77B.1.3510.000208
ORF1ab/nsp31841H1841YCatTat77B.1.5030.017413
ORF1ab/nsp31841H1841YCatTat77Q.80.001154
ORF1ab/nsp31841H1841PcAtcCt56All0.000001
ORF1ab/nsp31841H1841PcATcCC16All0
ORF1ab/nsp31841H1841YCatTat66AY.1180.000376
ORF1ab/nsp31841H1841YCatTat66AY.1200.000223
ORF1ab/nsp31841H1841YCatTat66AY.420.000241
ORF1ab/nsp31841H1841YCatTat66AY.46.10.00616
ORF1ab/nsp31841H1841YCatTat66AY.720.008163
ORF1ab/nsp31841H1841YCatTat66AY.980.000474
ORF1ab/nsp31841H1841YCatTat66B.1.1.2140.000333
ORF1ab/nsp31841H1841YCatTat66B.1.177.210.000459
ORF1ab/nsp31841H1841YCatTat66B.1.2340.000792
ORF1ab/nsp31841H1841YCatTat66B.1.2430.000418
ORF1ab/nsp31841H1841HcaTcaC55AY.1140.001156
ORF1ab/nsp31841H1841YCatTat55AY.360.000741
ORF1ab/nsp31841H1841delCAT---55AY.40.000008
ORF1ab/nsp31841H1841HcaTcaC55AY.4.20.000108
ORF1ab/nsp31841H1841RcAtcGt55AY.430.000022
ORF1ab/nsp31841H1841YCatTat55AY.470.000156
ORF1ab/nsp31841H1841YCatTat55B.1.1.370.000964
ORF1ab/nsp31841H1841YCatTat55B.1.1950.025126
ORF1ab/nsp31841H1841YCatTat55B.1.360.00073
ORF1ab/nsp31841H1841YCatTat55B.1.4680.028571
ORF1ab/nsp31841H1841YCatTat55B.1.5720.125
ORF1ab/nsp31841H1841YCatTat55B.1.5960.000436
ORF1ab/nsp31841H1841YCatTat55B.1.6210.000443
ORF1ab/nsp31841H1841YCatTat55C.370.00058
ORF1ab/nsp31841H1841HcaTcaC55P.50.068493
ORF1ab/nsp31841H1841YCatTat55R.10.00045
ORF1ab/nsp31841H1841YCatTat44AA.10.028986
ORF1ab/nsp31841H1841LcAtcTt44All0.000001
ORF1ab/nsp31841H1841YCatTat44AY.1190.000141
ORF1ab/nsp31841H1841QcaTcaG44AY.30.00004
ORF1ab/nsp31841H1841delCAT---44AY.430.000018
ORF1ab/nsp31841H1841HcaTcaC44AY.530.00115
ORF1ab/nsp31841H1841YCatTat44AY.580.00363
ORF1ab/nsp31841H1841YCatTat44AY.9.20.000147
ORF1ab/nsp31841H1841delCAT---44B.10.000037
ORF1ab/nsp31841H1841YCatTat44B.1.1.3260.007042
ORF1ab/nsp31841H1841NCatAat44B.1.1.5190.000159
ORF1ab/nsp31841H1841YCatTat44B.1.1080.023256
ORF1ab/nsp31841H1841YCatTat44B.1.4260.004036
ORF1ab/nsp31841H1841HcaTcaC44B.1.5090.003463
ORF1ab/nsp31841H1841YCatTat44B.1.5580.018265
ORF1ab/nsp31841H1841YCatTat44B.1.596.10.037383
ORF1ab/nsp31841H1841YCatTat44P.1.70.001277
ORF1ab/nsp31841H1841NCatAat330.166667
ORF1ab/nsp31841H1841NCatAat33A0.001161
ORF1ab/nsp31841H1841del1caTca-33All0.000001
ORF1ab/nsp31841H1841HcaTcaC33AY.1020.00008
ORF1ab/nsp31841H1841YCatTat33AY.1210.000406
ORF1ab/nsp31841H1841YCatTat33AY.130.000483
ORF1ab/nsp31841H1841RcAtcGt33AY.270.000194
ORF1ab/nsp31841H1841delCAT---33AY.4.50.000322
ORF1ab/nsp31841H1841HcaTcaC33AY.430.000013
ORF1ab/nsp31841H1841YCatTat33AY.450.000365
ORF1ab/nsp31841H1841YCatTat33AY.560.004815
ORF1ab/nsp31841H1841YCatTat33AY.640.001786
ORF1ab/nsp31841H1841YCatTat33AY.650.001599
ORF1ab/nsp31841H1841RcAtcGt33AY.980.000237
ORF1ab/nsp31841H1841YCatTat33B0.000383
ORF1ab/nsp31841H1841HcaTcaC33B.10.000027
ORF1ab/nsp31841H1841HcaTcaC33B.1.10.000054
ORF1ab/nsp31841H1841YCatTat33B.1.1.2630.004673
ORF1ab/nsp31841H1841YCatTat33B.1.1.330.001263
ORF1ab/nsp31841H1841YCatTat33B.1.177.600.000655
ORF1ab/nsp31841H1841YCatTat33B.1.177.730.001699
ORF1ab/nsp31841H1841QcaTcaG33B.1.20.000026
ORF1ab/nsp31841H1841YCatTat33B.1.2400.000647
ORF1ab/nsp31841H1841YCatTat33B.1.3360.007317
ORF1ab/nsp31841H1841HcaTcaC33B.1.3510.000089
ORF1ab/nsp31841H1841YCatTat33B.1.3620.004622
ORF1ab/nsp31841H1841YCatTat33B.1.466.20.001174
ORF1ab/nsp31841H1841YCatTat33B.1.4710.008197
ORF1ab/nsp31841H1841YCatTat33B.1.5250.000339
ORF1ab/nsp31841H1841HcaTcaC33B.1.617.10.000387
ORF1ab/nsp31841H1841RcAtcGt33B.1.617.20.000011
ORF1ab/nsp31841H1841YCatTat33C.160.003181
ORF1ab/nsp31841H1841HcaTcaC33P.10.000047
ORF1ab/nsp31841H1841delCAT---33P.10.000047
ORF1ab/nsp31841H1841YCatTat33P.20.00056
ORF1ab/nsp31841H1841QcaTcaA220.111111
ORF1ab/nsp31841H1841YCatTat22A0.000774
ORF1ab/nsp31841H1841PcATcCC12AY.1030.000006
ORF1ab/nsp31841H1841PcAtcCt12AY.1030.000006
ORF1ab/nsp31841H1841HcaTcaC22AY.1200.000074
ORF1ab/nsp31841H1841YCatTat22AY.120.10.000642
ORF1ab/nsp31841H1841YCatTat22AY.120.20.002571
ORF1ab/nsp31841H1841YCatTat22AY.120.2.10.000997
ORF1ab/nsp31841H1841HcaTcaC22AY.140.000176
ORF1ab/nsp31841H1841YCatTat22AY.140.000176
ORF1ab/nsp31841H1841YCatTat22AY.16.10.00094
ORF1ab/nsp31841H1841HcaTcaC22AY.230.000139
ORF1ab/nsp31841H1841NCatAat22AY.23.10.000835
ORF1ab/nsp31841H1841delCAT---22AY.250.000012
ORF1ab/nsp31841H1841HcaTcaC22AY.290.000032
ORF1ab/nsp31841H1841YCatTat22AY.350.000466
ORF1ab/nsp31841H1841RcAtcGt22AY.40.000003
ORF1ab/nsp31841H1841del1caTca-22AY.440.000012
ORF1ab/nsp31841H1841YCatTat22AY.46.40.000329
ORF1ab/nsp31841H1841YCatTat22AY.46.50.000397
ORF1ab/nsp31841H1841HcaTcaC22AY.520.001629
ORF1ab/nsp31841H1841QcaTcaG22AY.590.001059
ORF1ab/nsp31841H1841YCatTat22AY.60.000082
ORF1ab/nsp31841H1841YCatTat22AY.700.000417
ORF1ab/nsp31841H1841YCatTat22AY.750.000112
ORF1ab/nsp31841H1841YCatTat22AY.930.000546
ORF1ab/nsp31841H1841YCatTat22AY.99.20.000184
ORF1ab/nsp31841H1841QcaTcaA22B.10.000018
ORF1ab/nsp31841H1841RcAtcGt22B.10.000018
ORF1ab/nsp31841H1841delCAT---22B.1.10.000036
ORF1ab/nsp31841H1841QcaTcaG22B.1.1.2980.001724
ORF1ab/nsp31841H1841HcaTcaC22B.1.1.3060.000877
ORF1ab/nsp31841H1841YCatTat22B.1.1.3550.030769
ORF1ab/nsp31841H1841YCatTat22B.1.1.3760.011905
ORF1ab/nsp31841H1841YCatTat22B.1.1.3850.008929
ORF1ab/nsp31841H1841YCatTat22B.1.1.630.000772
ORF1ab/nsp31841H1841NCatAat22B.1.1.70.000002
ORF1ab/nsp31841H1841delCAT---22B.1.177.160.001329
ORF1ab/nsp31841H1841YCatTat22B.1.177.320.002699
ORF1ab/nsp31841H1841YCatTat22B.1.2210.000142
ORF1ab/nsp31841H1841delCAT---22B.1.2340.000264
ORF1ab/nsp31841H1841YCatTat22B.1.36.10.002281
ORF1ab/nsp31841H1841YCatTat22B.1.36.380.003284
ORF1ab/nsp31841H1841YCatTat22B.1.390.007812
ORF1ab/nsp31841H1841HcaTcaC22B.1.438.10.000215
ORF1ab/nsp31841H1841YCatTat22B.1.4600.035714
ORF1ab/nsp31841H1841YCatTat22B.1.5370.04
ORF1ab/nsp31841H1841HcaTcaC22B.1.5600.009259
ORF1ab/nsp31841H1841YCatTat22B.1.5640.000852
ORF1ab/nsp31841H1841PcAtcCt22B.1.5960.000174
ORF1ab/nsp31841H1841YCatTat22B.1.6000.011696
ORF1ab/nsp31841H1841HcaTcaC22B.1.6370.000146
ORF1ab/nsp31841H1841RcAtcGt22B.1.910.004149
ORF1ab/nsp31841H1841YCatTat22D.20.00015
ORF1ab/nsp31841H1841RcAtcGt22P.10.000032
ORF1ab/nsp31841H1841YCatTat22P.1.10.000635
ORF1ab/nsp31841H1841YCatTat22P.1.140.000096
ORF1ab/nsp31841H1841HcaTcaC110.055556
ORF1ab/nsp31841H1841KCaTAaA110.055556
ORF1ab/nsp31841H1841PcAtcCt110.055556
ORF1ab/nsp31841H1841TCAtACt110.055556
ORF1ab/nsp31841H1841HcaTcaC11A.20.000662
ORF1ab/nsp31841H1841HcaTcaC11A.2.40.003367
ORF1ab/nsp31841H1841YCatTat11A.50.001923
ORF1ab/nsp31841H1841delCAT---11AD.20.000219
ORF1ab/nsp31841H1841ICAtATt11All0
ORF1ab/nsp31841H1841del2CAt--t11All0
ORF1ab/nsp31841H1841TCAtACt11All0
ORF1ab/nsp31841H1841KCaTAaA11All0
ORF1ab/nsp31841H1841HcaTcaC11AY.10.000396
ORF1ab/nsp31841H1841HcaTcaC11AY.100.00053
ORF1ab/nsp31841H1841YCatTat11AY.100.00053
ORF1ab/nsp31841H1841RcAtcGt11AY.1000.000046
ORF1ab/nsp31841H1841RcAtcGt11AY.1020.000027
ORF1ab/nsp31841H1841QcaTcaG11AY.1210.000135
ORF1ab/nsp31841H1841HcaTcaC11AY.160.00038
ORF1ab/nsp31841H1841delCAT---11AY.190.00114
ORF1ab/nsp31841H1841YCatTat11AY.20.000356
ORF1ab/nsp31841H1841YCatTat11AY.23.10.000417
ORF1ab/nsp31841H1841HcaTcaC11AY.23.10.000417
ORF1ab/nsp31841H1841RcAtcGt11AY.250.000006
ORF1ab/nsp31841H1841YCatTat11AY.270.000065
ORF1ab/nsp31841H1841RcAtcGt11AY.290.000016
ORF1ab/nsp31841H1841RcAtcGt11AY.29.10.000221
ORF1ab/nsp31841H1841RcAtcGt11AY.30.00001
ORF1ab/nsp31841H1841delCAT---11AY.3.10.000085
ORF1ab/nsp31841H1841YCatTat11AY.3.10.000085
ORF1ab/nsp31841H1841HcaTcaC11AY.350.000233
ORF1ab/nsp31841H1841QcaTcaG11AY.350.000233
ORF1ab/nsp31841H1841YCatTat11AY.370.000316
ORF1ab/nsp31841H1841HcaTcaC11AY.39.10.00004
ORF1ab/nsp31841H1841QcaTcaG11AY.40.000002
ORF1ab/nsp31841H1841LcAtcTt11AY.40.000002
ORF1ab/nsp31841H1841YCatTat11AY.4.30.000842
ORF1ab/nsp31841H1841HcaTcaC11AY.420.00004
ORF1ab/nsp31841H1841QcaTcaG11AY.420.00004
ORF1ab/nsp31841H1841RcAtcGt11AY.440.000006
ORF1ab/nsp31841H1841HcaTcaC11AY.450.000122
ORF1ab/nsp31841H1841delCAT---11AY.46.20.000635
ORF1ab/nsp31841H1841YCatTat11AY.46.60.000072
ORF1ab/nsp31841H1841QcaTcaG11AY.470.000031
ORF1ab/nsp31841H1841PcAtcCt11AY.50.000021
ORF1ab/nsp31841H1841HcaTcaC11AY.50.000021
ORF1ab/nsp31841H1841YCatTat11AY.5.40.000277
ORF1ab/nsp31841H1841delCAT---11AY.520.000814
ORF1ab/nsp31841H1841YCatTat11AY.520.000814
ORF1ab/nsp31841H1841YCatTat11AY.550.000917
ORF1ab/nsp31841H1841HcaTcaC11AY.560.001605
ORF1ab/nsp31841H1841YCatTat11AY.570.000656
ORF1ab/nsp31841H1841delCAT---11AY.60.000041
ORF1ab/nsp31841H1841HcaTcaC11AY.620.000436
ORF1ab/nsp31841H1841YCatTat11AY.680.000274
ORF1ab/nsp31841H1841YCatTat11AY.70.000196
ORF1ab/nsp31841H1841YCatTat11AY.710.000475
ORF1ab/nsp31841H1841YCatTat11AY.740.000116
ORF1ab/nsp31841H1841HcaTcaC11AY.750.000056
ORF1ab/nsp31841H1841YCatTat11AY.790.001211
ORF1ab/nsp31841H1841YCatTat11AY.80.000606
ORF1ab/nsp31841H1841YCatTat11AY.860.00083
ORF1ab/nsp31841H1841YCatTat11AY.890.004902
ORF1ab/nsp31841H1841HcaTcaC11AY.90.000068
ORF1ab/nsp31841H1841YCatTat11AY.920.000287
ORF1ab/nsp31841H1841QcaTcaA11B0.000128
ORF1ab/nsp31841H1841delCAT---11B0.000128
ORF1ab/nsp31841H1841LcAtcTt11B.10.000009
ORF1ab/nsp31841H1841NCatAat11B.10.000009
ORF1ab/nsp31841H1841YCatTat11B.1.1.10.000327
ORF1ab/nsp31841H1841HcaTcaC11B.1.1.1570.000913
ORF1ab/nsp31841H1841delCAT---11B.1.1.1590.004673
ORF1ab/nsp31841H1841YCatTat11B.1.1.1720.018182
ORF1ab/nsp31841H1841YCatTat11B.1.1.1860.003436
ORF1ab/nsp31841H1841YCatTat11B.1.1.1920.002309
ORF1ab/nsp31841H1841HcaTcaC11B.1.1.2140.000055
ORF1ab/nsp31841H1841YCatTat11B.1.1.2360.006897
ORF1ab/nsp31841H1841YCatTat11B.1.1.2940.001266
ORF1ab/nsp31841H1841NCatAat11B.1.1.2970.002237
ORF1ab/nsp31841H1841delCAT---11B.1.1.3060.000438
ORF1ab/nsp31841H1841YCatTat11B.1.1.3080.011765
ORF1ab/nsp31841H1841YCatTat11B.1.1.3110.000358
ORF1ab/nsp31841H1841delCAT---11B.1.1.3150.008475
ORF1ab/nsp31841H1841QcaTcaG11B.1.1.330.000421
ORF1ab/nsp31841H1841YCatTat11B.1.1.3330.001076
ORF1ab/nsp31841H1841YCatTat11B.1.1.3440.010753
ORF1ab/nsp31841H1841YCatTat11B.1.1.4200.001006
ORF1ab/nsp31841H1841HcaTcaC11B.1.1.4340.000349
ORF1ab/nsp31841H1841YCatTat11B.1.1.5260.003546
ORF1ab/nsp31841H1841del2CAt--t11B.1.1.70.000001
ORF1ab/nsp31841H1841ICAtATt11B.1.1.70.000001
ORF1ab/nsp31841H1841HcaTcaC11B.1.1.700.000341
ORF1ab/nsp31841H1841YCatTat11B.1.1.890.006061
ORF1ab/nsp31841H1841YCatTat11B.1.1110.001175
ORF1ab/nsp31841H1841QcaTcaG11B.1.1450.052632
ORF1ab/nsp31841H1841YCatTat11B.1.1470.000756
ORF1ab/nsp31841H1841HcaTcaC11B.1.1600.000031
ORF1ab/nsp31841H1841YCatTat11B.1.160.150.00495
ORF1ab/nsp31841H1841HcaTcaC11B.1.160.250.011111
ORF1ab/nsp31841H1841delCAT---11B.1.1770.000013
ORF1ab/nsp31841H1841delCAT---11B.1.177.180.00116
ORF1ab/nsp31841H1841YCatTat11B.1.177.40.000211
ORF1ab/nsp31841H1841YCatTat11B.1.177.510.004566
ORF1ab/nsp31841H1841delCAT---11B.1.177.540.000606
ORF1ab/nsp31841H1841YCatTat11B.1.177.620.001192
ORF1ab/nsp31841H1841YCatTat11B.1.177.650.000665
ORF1ab/nsp31841H1841YCatTat11B.1.177.70.000165
ORF1ab/nsp31841H1841YCatTat11B.1.177.820.000477
ORF1ab/nsp31841H1841HcaTcaC11B.1.177.850.005435
ORF1ab/nsp31841H1841YCatTat11B.1.177.860.000183
ORF1ab/nsp31841H1841LcAtcTt11B.1.20.000009
ORF1ab/nsp31841H1841RcAtcGt11B.1.20.000009
ORF1ab/nsp31841H1841YCatTat11B.1.220.001318
ORF1ab/nsp31841H1841HcaTcaC11B.1.2210.000071
ORF1ab/nsp31841H1841YCatTat11B.1.221.40.004167
ORF1ab/nsp31841H1841YCatTat11B.1.2410.000812
ORF1ab/nsp31841H1841QcaTcaA11B.1.2430.00007
ORF1ab/nsp31841H1841delCAT---11B.1.258.100.011364
ORF1ab/nsp31841H1841YCatTat11B.1.2630.047619
ORF1ab/nsp31841H1841YCatTat11B.1.30.002618
ORF1ab/nsp31841H1841YCatTat11B.1.3020.013333
ORF1ab/nsp31841H1841YCatTat11B.1.3370.005587
ORF1ab/nsp31841H1841YCatTat11B.1.3380.008621
ORF1ab/nsp31841H1841HcaTcaC11B.1.3490.000715
ORF1ab/nsp31841H1841YCatTat11B.1.3490.000715
ORF1ab/nsp31841H1841LcAtcTt11B.1.3510.00003
ORF1ab/nsp31841H1841YCatTat11B.1.351.30.000876
ORF1ab/nsp31841H1841RcAtcGt11B.1.351.30.000876
ORF1ab/nsp31841H1841delCAT---11B.1.36.220.001208
ORF1ab/nsp31841H1841YCatTat11B.1.36.290.000517
ORF1ab/nsp31841H1841YCatTat11B.1.36.310.001751
ORF1ab/nsp31841H1841YCatTat11B.1.36.80.001
ORF1ab/nsp31841H1841QcaTcaG11B.1.3690.000285
ORF1ab/nsp31841H1841YCatTat11B.1.3750.00082
ORF1ab/nsp31841H1841YCatTat11B.1.3770.004566
ORF1ab/nsp31841H1841YCatTat11B.1.3960.000706
ORF1ab/nsp31841H1841YCatTat11B.1.3970.004854
ORF1ab/nsp31841H1841HcaTcaC11B.1.4000.000429
ORF1ab/nsp31841H1841YCatTat11B.1.438.10.000107
ORF1ab/nsp31841H1841YCatTat11B.1.4410.009615
ORF1ab/nsp31841H1841YCatTat11B.1.4530.003236
ORF1ab/nsp31841H1841YCatTat11B.1.4560.003268
ORF1ab/nsp31841H1841HcaTcaC11B.1.4590.004082
ORF1ab/nsp31841H1841YCatTat11B.1.4940.034483
ORF1ab/nsp31841H1841YCatTat11B.1.4970.000315
ORF1ab/nsp31841H1841YCatTat11B.1.5230.002451
ORF1ab/nsp31841H1841HcaTcaC11B.1.5250.000113
ORF1ab/nsp31841H1841HcaTcaC11B.1.5260.000024
ORF1ab/nsp31841H1841NCatAat11B.1.5260.000024
ORF1ab/nsp31841H1841YCatTat11B.1.5300.007143
ORF1ab/nsp31841H1841YCatTat11B.1.5510.00129
ORF1ab/nsp31841H1841YCatTat11B.1.5770.000687
ORF1ab/nsp31841H1841YCatTat11B.1.5820.000491
ORF1ab/nsp31841H1841YCatTat11B.1.5950.000261
ORF1ab/nsp31841H1841YCatTat11B.1.617.10.000129
ORF1ab/nsp31841H1841QcaTcaG11B.1.617.20.000004
ORF1ab/nsp31841H1841delCAT---11B.1.617.20.000004
ORF1ab/nsp31841H1841YCatTat11B.1.621.10.000506
ORF1ab/nsp31841H1841YCatTat11B.1.6270.00202
ORF1ab/nsp31841H1841delCAT---11B.1.6380.052632
ORF1ab/nsp31841H1841YCatTat11B.6.60.000889
ORF1ab/nsp31841H1841QcaTcaA11B.6.60.000889
ORF1ab/nsp31841H1841delCAT---11C.170.055556
ORF1ab/nsp31841H1841HcaTcaC11C.350.000774
ORF1ab/nsp31841H1841QcaTcaG11C.370.000116
ORF1ab/nsp31841H1841delCAT---11C.370.000116
ORF1ab/nsp31841H1841del1caTca-11D.20.000075
ORF1ab/nsp31841H1841YCatTat11N.40.004255
ORF1ab/nsp31841H1841YCatTat11N.60.007092
ORF1ab/nsp31841H1841YCatTat11P.1.170.000162
ORF1ab/nsp31841H1841delCAT---11Q.10.000126
ORF1ab/nsp31841H1841YCatTat11Q.30.000145
ORF1ab/nsp31841H1841delCAT---11U.30.003861
ORF1ab/nsp31841H1841YCatTat11Z.10.00289