CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1754 & Codon = ctG

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31754L1754LL2572LsynctActG197914470.7311777979-7981

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31754L1754LctActG14471979All0.000277
ORF1ab/nsp31754L1754LctActG473473Q.70.525556
ORF1ab/nsp31754L1754LctActG203206AY.390.005016
ORF1ab/nsp31754L1754LctActG83127AY.40.000129
ORF1ab/nsp31754L1754LctActG57126B.1.1.70.000051
ORF1ab/nsp31754L1754LctActG2874AY.250.000168
ORF1ab/nsp31754L1754LctActG3970P.10.000614
ORF1ab/nsp31754L1754LctActG5264B.1.2430.003618
ORF1ab/nsp31754L1754LctActG5757B.1.438.10.006114
ORF1ab/nsp31754L1754LctActG2556B.10.000229
ORF1ab/nsp31754L1754LctActG5151P.1.60.099222
ORF1ab/nsp31754L1754LctActG4243B.1.177.150.026498
ORF1ab/nsp31754L1754LctActG1841B.1.617.20.000068
ORF1ab/nsp31754L1754LctActG1340B.1.20.000114
ORF1ab/nsp31754L1754LctActG439B.1.5260.000094
ORF1ab/nsp31754L1754LctActG1331AY.1030.000081
ORF1ab/nsp31754L1754LctActG2627AY.420.001046
ORF1ab/nsp31754L1754LctActG2121AY.4.20.000455
ORF1ab/nsp31754L1754LctActG1220AY.1020.000318
ORF1ab/nsp31754L1754LctActG1120AY.430.000049
ORF1ab/nsp31754L1754LctActG517AY.440.00003
ORF1ab/nsp31754L1754LctActG616B.1.1770.000079
ORF1ab/nsp31754L1754LctActG1515B.1.4970.004721
ORF1ab/nsp31754L1754LctActG712AY.30.00007
ORF1ab/nsp31754L1754LctActG210AY.260.000057
ORF1ab/nsp31754L1754LctActG410B.1.360.000584
ORF1ab/nsp31754L1754LctActG89AY.1000.000368
ORF1ab/nsp31754L1754LctActG78B.1.10.000127
ORF1ab/nsp31754L1754LctActG88B.1.6280.002819
ORF1ab/nsp31754L1754LctActG77AY.1210.000947
ORF1ab/nsp31754L1754LctActG37AY.290.000047
ORF1ab/nsp31754L1754LctActG77B.1.2210.000497
ORF1ab/nsp31754L1754LctActG77B.1.2580.000466
ORF1ab/nsp31754L1754LctActG47B.1.3510.000119
ORF1ab/nsp31754L1754LctActG77B.1.466.10.05036
ORF1ab/nsp31754L1754LctActG66B.1.1.2000.044776
ORF1ab/nsp31754L1754LctActG26B.1.5250.000226
ORF1ab/nsp31754L1754LctActG15B.1.1600.000031
ORF1ab/nsp31754L1754LctActG55B.1.4990.005252
ORF1ab/nsp31754L1754LctActG35B.1.6370.000219
ORF1ab/nsp31754L1754LctActG45P.1.140.000191
ORF1ab/nsp31754L1754LctActG44AE.80.001956
ORF1ab/nsp31754L1754LctActG44AY.1170.000338
ORF1ab/nsp31754L1754LctActG24B.1.6210.000177
ORF1ab/nsp31754L1754LctActG44B.1.930.003735
ORF1ab/nsp31754L1754LctActG33A.2.5.20.004717
ORF1ab/nsp31754L1754LctActG13AY.230.00007
ORF1ab/nsp31754L1754LctActG23AY.270.000129
ORF1ab/nsp31754L1754LctActG23AY.9.20.000073
ORF1ab/nsp31754L1754LctActG33AY.910.002191
ORF1ab/nsp31754L1754LctActG33AY.950.002283
ORF1ab/nsp31754L1754LctActG33B.1.1.3180.000905
ORF1ab/nsp31754L1754LctActG33B.1.1.4370.03125
ORF1ab/nsp31754L1754LctActG33B.1.214.20.001799
ORF1ab/nsp31754L1754LctActG13B.1.3490.000715
ORF1ab/nsp31754L1754LctActG33B.1.4290.000071
ORF1ab/nsp31754L1754LctActG33B.1.5750.00091
ORF1ab/nsp31754L1754LctActG33B.1.6020.019608
ORF1ab/nsp31754L1754LctActG33P.1.170.000485
ORF1ab/nsp31754L1754LctActG22AY.1190.000071
ORF1ab/nsp31754L1754LctActG22AY.120.10.000642
ORF1ab/nsp31754L1754LctActG22AY.160.000759
ORF1ab/nsp31754L1754LctActG12AY.320.000532
ORF1ab/nsp31754L1754LctActG22AY.34.10.00102
ORF1ab/nsp31754L1754LctActG12AY.4.50.000107
ORF1ab/nsp31754L1754LctActG12AY.450.000122
ORF1ab/nsp31754L1754LctActG22AY.470.000062
ORF1ab/nsp31754L1754LctActG22AY.5.30.000675
ORF1ab/nsp31754L1754LctActG22AY.560.00321
ORF1ab/nsp31754L1754LctActG12AY.60.000041
ORF1ab/nsp31754L1754LctActG22B.1.1.2690.002706
ORF1ab/nsp31754L1754LctActG22B.30.001661
ORF1ab/nsp31754L1754LctActG12D.20.000075
ORF1ab/nsp31754L1754LctActG22Q.10.000253
ORF1ab/nsp31754L1754LctActG22R.10.00018
ORF1ab/nsp31754L1754LctActG11A.23.10.000704
ORF1ab/nsp31754L1754LctActG11AY.1060.000335
ORF1ab/nsp31754L1754LctActG11AY.29.10.000221
ORF1ab/nsp31754L1754LctActG11AY.3.10.000085
ORF1ab/nsp31754L1754LctActG11AY.360.000148
ORF1ab/nsp31754L1754LctActG11AY.46.50.000198
ORF1ab/nsp31754L1754LctActG11AY.5.40.000277
ORF1ab/nsp31754L1754LctActG11AY.520.000814
ORF1ab/nsp31754L1754LctActG11AY.570.000656
ORF1ab/nsp31754L1754LctActG11AY.630.000387
ORF1ab/nsp31754L1754LctActG11AY.850.000427
ORF1ab/nsp31754L1754LctActG11AY.920.000287
ORF1ab/nsp31754L1754LctActG11AY.930.000273
ORF1ab/nsp31754L1754LctActG11B.1.1.1820.090909
ORF1ab/nsp31754L1754LctActG11B.1.1.250.000569
ORF1ab/nsp31754L1754LctActG11B.1.1.280.000311
ORF1ab/nsp31754L1754LctActG11B.1.1.4090.002833
ORF1ab/nsp31754L1754LctActG11B.1.177.530.002392
ORF1ab/nsp31754L1754LctActG11B.1.177.810.000189
ORF1ab/nsp31754L1754LctActG11B.1.258.30.001675
ORF1ab/nsp31754L1754LctActG11B.1.4730.019231
ORF1ab/nsp31754L1754LctActG11B.1.617.10.000129
ORF1ab/nsp31754L1754LctActG11C.230.005814
ORF1ab/nsp31754L1754LctActG11P.1.120.000484