CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 174 & Codon = gaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3174D174DD992DsyngaCgaT2020202013239-3241

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3174D174DgaCgaT20202020All0.000386
ORF1ab/nsp3174D174DgaCgaT380380B.1.1.70.00034
ORF1ab/nsp3174D174DgaCgaT278278AM.40.992857
ORF1ab/nsp3174D174DgaCgaT196196AY.40.000305
ORF1ab/nsp3174D174DgaCgaT8585B.1.617.20.00032
ORF1ab/nsp3174D174DgaCgaT5757B.1.4040.074219
ORF1ab/nsp3174D174DgaCgaT5353B.1.617.10.006835
ORF1ab/nsp3174D174DgaCgaT5151AY.1030.000317
ORF1ab/nsp3174D174DgaCgaT4646AY.250.000277
ORF1ab/nsp3174D174DgaCgaT4141AY.530.011788
ORF1ab/nsp3174D174DgaCgaT4040AY.430.000177
ORF1ab/nsp3174D174DgaCgaT4040AY.440.000243
ORF1ab/nsp3174D174DgaCgaT3434B.1.4290.0008
ORF1ab/nsp3174D174DgaCgaT3131AY.34.10.015808
ORF1ab/nsp3174D174DgaCgaT3030B.1.20.000264
ORF1ab/nsp3174D174DgaCgaT2929AY.9.10.002428
ORF1ab/nsp3174D174DgaCgaT2828B.10.000256
ORF1ab/nsp3174D174DgaCgaT2424B.1.10.000435
ORF1ab/nsp3174D174DgaCgaT2424B.1.3510.000713
ORF1ab/nsp3174D174DgaCgaT2323P.10.000362
ORF1ab/nsp3174D174DgaCgaT2222AY.1070.010252
ORF1ab/nsp3174D174DgaCgaT2121AY.470.000653
ORF1ab/nsp3174D174DgaCgaT2020AY.1020.00053
ORF1ab/nsp3174D174DgaCgaT1818B.1.1770.000237
ORF1ab/nsp3174D174DgaCgaT1717AY.4.20.000369
ORF1ab/nsp3174D174DgaCgaT1616AY.50.00033
ORF1ab/nsp3174D174DgaCgaT1515AY.30.000149
ORF1ab/nsp3174D174DgaCgaT1515AY.390.000371
ORF1ab/nsp3174D174DgaCgaT1313B.1.177.210.000994
ORF1ab/nsp3174D174DgaCgaT1313B.1.177.810.002461
ORF1ab/nsp3174D174DgaCgaT1212AY.260.00034
ORF1ab/nsp3174D174DgaCgaT1111AY.420.000443
ORF1ab/nsp3174D174DgaCgaT1111B.1.177.600.002403
ORF1ab/nsp3174D174DgaCgaT1010AY.3.10.000853
ORF1ab/nsp3174D174DgaCgaT1010AY.330.000668
ORF1ab/nsp3174D174DgaCgaT1010AY.540.000953
ORF1ab/nsp3174D174DgaCgaT1010AY.98.10.000484
ORF1ab/nsp3174D174DgaCgaT99AY.1190.000318
ORF1ab/nsp3174D174DgaCgaT99AY.200.00035
ORF1ab/nsp3174D174DgaCgaT88AY.870.006661
ORF1ab/nsp3174D174DgaCgaT88B.1.1.4860.012618
ORF1ab/nsp3174D174DgaCgaT88B.1.5260.000188
ORF1ab/nsp3174D174DgaCgaT77B.1.5950.001827
ORF1ab/nsp3174D174DgaCgaT77B.1.5960.00061
ORF1ab/nsp3174D174DgaCgaT66AY.1000.000276
ORF1ab/nsp3174D174DgaCgaT66AY.690.00112
ORF1ab/nsp3174D174DgaCgaT55AY.290.000079
ORF1ab/nsp3174D174DgaCgaT55AY.46.50.000992
ORF1ab/nsp3174D174DgaCgaT55AY.46.60.000361
ORF1ab/nsp3174D174DgaCgaT55AY.620.002179
ORF1ab/nsp3174D174DgaCgaT55B.1.1.4030.128205
ORF1ab/nsp3174D174DgaCgaT55B.1.177.160.003322
ORF1ab/nsp3174D174DgaCgaT55B.1.6210.000443
ORF1ab/nsp3174D174DgaCgaT55C.370.00058
ORF1ab/nsp3174D174DgaCgaT55P.20.000933
ORF1ab/nsp3174D174DgaCgaT44AY.1180.000251
ORF1ab/nsp3174D174DgaCgaT44AY.1210.000541
ORF1ab/nsp3174D174DgaCgaT44AY.130.000644
ORF1ab/nsp3174D174DgaCgaT44AY.4.2.10.000596
ORF1ab/nsp3174D174DgaCgaT44AY.9.20.000147
ORF1ab/nsp3174D174DgaCgaT44B.1.1.3180.001207
ORF1ab/nsp3174D174DgaCgaT44B.1.1.500.002716
ORF1ab/nsp3174D174DgaCgaT44B.1.1.5190.000159
ORF1ab/nsp3174D174DgaCgaT44B.1.3980.011905
ORF1ab/nsp3174D174DgaCgaT33AY.140.000264
ORF1ab/nsp3174D174DgaCgaT33AY.230.000209
ORF1ab/nsp3174D174DgaCgaT33AY.240.001293
ORF1ab/nsp3174D174DgaCgaT33AY.450.000365
ORF1ab/nsp3174D174DgaCgaT33AY.500.002398
ORF1ab/nsp3174D174DgaCgaT33AY.60.000123
ORF1ab/nsp3174D174DgaCgaT33AY.610.000314
ORF1ab/nsp3174D174DgaCgaT33AY.750.000168
ORF1ab/nsp3174D174DgaCgaT33AY.980.000237
ORF1ab/nsp3174D174DgaCgaT33B.1.1.3260.005282
ORF1ab/nsp3174D174DgaCgaT22AY.1130.000285
ORF1ab/nsp3174D174DgaCgaT22AY.160.000759
ORF1ab/nsp3174D174DgaCgaT22AY.270.000129
ORF1ab/nsp3174D174DgaCgaT22AY.360.000296
ORF1ab/nsp3174D174DgaCgaT22AY.39.20.003082
ORF1ab/nsp3174D174DgaCgaT22AY.460.000208
ORF1ab/nsp3174D174DgaCgaT22AY.5.40.000553
ORF1ab/nsp3174D174DgaCgaT22B.1.1.1760.000879
ORF1ab/nsp3174D174DgaCgaT22B.1.1.2940.002532
ORF1ab/nsp3174D174DgaCgaT22B.1.1.700.000682
ORF1ab/nsp3174D174DgaCgaT22B.1.1450.105263
ORF1ab/nsp3174D174DgaCgaT22B.1.1460.008475
ORF1ab/nsp3174D174DgaCgaT22B.1.177.40.000422
ORF1ab/nsp3174D174DgaCgaT22B.1.2130.029851
ORF1ab/nsp3174D174DgaCgaT22B.1.2210.000142
ORF1ab/nsp3174D174DgaCgaT22B.1.2430.000139
ORF1ab/nsp3174D174DgaCgaT22B.1.3360.004878
ORF1ab/nsp3174D174DgaCgaT22B.1.4270.000101
ORF1ab/nsp3174D174DgaCgaT22B.1.5250.000226
ORF1ab/nsp3174D174DgaCgaT22B.1.6310.006734
ORF1ab/nsp3174D174DgaCgaT22P.1.140.000096
ORF1ab/nsp3174D174DgaCgaT22Q.40.00091
ORF1ab/nsp3174D174DgaCgaT11A.2.20.001689
ORF1ab/nsp3174D174DgaCgaT11AD.20.000219
ORF1ab/nsp3174D174DgaCgaT11AY.1090.00074
ORF1ab/nsp3174D174DgaCgaT11AY.1100.000113
ORF1ab/nsp3174D174DgaCgaT11AY.1110.000183
ORF1ab/nsp3174D174DgaCgaT11AY.1170.000085
ORF1ab/nsp3174D174DgaCgaT11AY.1200.000037
ORF1ab/nsp3174D174DgaCgaT11AY.210.001898
ORF1ab/nsp3174D174DgaCgaT11AY.300.000396
ORF1ab/nsp3174D174DgaCgaT11AY.340.000097
ORF1ab/nsp3174D174DgaCgaT11AY.4.50.000107
ORF1ab/nsp3174D174DgaCgaT11AY.400.000964
ORF1ab/nsp3174D174DgaCgaT11AY.600.000938
ORF1ab/nsp3174D174DgaCgaT11AY.740.000116
ORF1ab/nsp3174D174DgaCgaT11AY.790.001211
ORF1ab/nsp3174D174DgaCgaT11AY.80.000606
ORF1ab/nsp3174D174DgaCgaT11AY.860.00083
ORF1ab/nsp3174D174DgaCgaT11AY.920.000287
ORF1ab/nsp3174D174DgaCgaT11AY.950.000761
ORF1ab/nsp3174D174DgaCgaT11AZ.30.00152
ORF1ab/nsp3174D174DgaCgaT11B0.000128
ORF1ab/nsp3174D174DgaCgaT11B.1.1.100.001115
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2140.000055
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2160.00089
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2210.010101
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2250.007194
ORF1ab/nsp3174D174DgaCgaT11B.1.1.250.000569
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp3174D174DgaCgaT11B.1.1.3060.000438
ORF1ab/nsp3174D174DgaCgaT11B.1.1.3890.006061
ORF1ab/nsp3174D174DgaCgaT11B.1.1.4160.000905
ORF1ab/nsp3174D174DgaCgaT11B.1.1.4850.016667
ORF1ab/nsp3174D174DgaCgaT11B.1.1600.000031
ORF1ab/nsp3174D174DgaCgaT11B.1.177.120.000152
ORF1ab/nsp3174D174DgaCgaT11B.1.177.200.001517
ORF1ab/nsp3174D174DgaCgaT11B.1.177.230.003236
ORF1ab/nsp3174D174DgaCgaT11B.1.177.710.010101
ORF1ab/nsp3174D174DgaCgaT11B.1.177.750.001041
ORF1ab/nsp3174D174DgaCgaT11B.1.177.870.000728
ORF1ab/nsp3174D174DgaCgaT11B.1.220.001318
ORF1ab/nsp3174D174DgaCgaT11B.1.2340.000132
ORF1ab/nsp3174D174DgaCgaT11B.1.2580.000067
ORF1ab/nsp3174D174DgaCgaT11B.1.258.110.000396
ORF1ab/nsp3174D174DgaCgaT11B.1.258.170.000104
ORF1ab/nsp3174D174DgaCgaT11B.1.3110.000275
ORF1ab/nsp3174D174DgaCgaT11B.1.351.20.000303
ORF1ab/nsp3174D174DgaCgaT11B.1.351.30.000876
ORF1ab/nsp3174D174DgaCgaT11B.1.3560.001727
ORF1ab/nsp3174D174DgaCgaT11B.1.36.290.000517
ORF1ab/nsp3174D174DgaCgaT11B.1.36.80.001
ORF1ab/nsp3174D174DgaCgaT11B.1.4200.010417
ORF1ab/nsp3174D174DgaCgaT11B.1.466.20.000391
ORF1ab/nsp3174D174DgaCgaT11B.1.5090.000866
ORF1ab/nsp3174D174DgaCgaT11B.1.5640.000426
ORF1ab/nsp3174D174DgaCgaT11B.1.5770.000687
ORF1ab/nsp3174D174DgaCgaT11B.1.6190.000871
ORF1ab/nsp3174D174DgaCgaT11B.1.6280.000352
ORF1ab/nsp3174D174DgaCgaT11B.1.9.50.005682
ORF1ab/nsp3174D174DgaCgaT11D.20.000075
ORF1ab/nsp3174D174DgaCgaT11P.1.150.000232
ORF1ab/nsp3174D174DgaCgaT11P.1.170.000162
ORF1ab/nsp3174D174DgaCgaT11P.1.20.001156