CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 174

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3174D174YD992YnonsynGacTac2136213613239-3241
ORF1ab/nsp3174D174DD992DsyngaCgaT2020202013239-3241
ORF1ab/nsp3174D174ND992NnonsynGacAac5985950.9949833239-3241
ORF1ab/nsp3174D174ND992NnonsynGaCAaT59830.005016723239-3241
ORF1ab/nsp3174D174GD992GnonsyngAcgGc30730713239-3241
ORF1ab/nsp3174D174AD992AnonsyngAcgCc1671660.9940123239-3241
ORF1ab/nsp3174D174AD992AnonsyngACgCG16710.005988023239-3241
ORF1ab/nsp3174D174delD992deldelGAC---939313239-3241
ORF1ab/nsp3174D174ED992EnonsyngaCgaA66600.9090913239-3241
ORF1ab/nsp3174D174ED992EnonsyngaCgaG6660.09090913239-3241
ORF1ab/nsp3174D174HD992HnonsynGacCac4413239-3241
ORF1ab/nsp3174D174TD992TnonsynGAcACc210.53239-3241
ORF1ab/nsp3174D174TD992TnonsynGACACG210.53239-3241
ORF1ab/nsp3174D174del1D992del1delGAC-NN1113239-3241
ORF1ab/nsp3174D174KD992KnonsynGaCAaG1113239-3241

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3174D174YGacTac21362136All0.000409
ORF1ab/nsp3174D174DgaCgaT20202020All0.000386
ORF1ab/nsp3174D174NGacAac595598All0.000114
ORF1ab/nsp3174D174NGaCAaT3598All0.000001
ORF1ab/nsp3174D174YGacTac470470B.10.004305
ORF1ab/nsp3174D174YGacTac447447B.1.1270.982418
ORF1ab/nsp3174D174DgaCgaT380380B.1.1.70.00034
ORF1ab/nsp3174D174GgAcgGc307307All0.000059
ORF1ab/nsp3174D174DgaCgaT278278AM.40.992857
ORF1ab/nsp3174D174YGacTac262262AY.40.000408
ORF1ab/nsp3174D174DgaCgaT196196AY.40.000305
ORF1ab/nsp3174D174NGacAac172175B.1.2180.886598
ORF1ab/nsp3174D174NGaCAaT3175B.1.2180.015464
ORF1ab/nsp3174D174NGacAac168168B.1.1.70.00015
ORF1ab/nsp3174D174AgAcgCc166167All0.000032
ORF1ab/nsp3174D174AgACgCG1167All0
ORF1ab/nsp3174D174YGacTac151151B.1.1.70.000135
ORF1ab/nsp3174D174YGacTac135135AY.430.000598
ORF1ab/nsp3174D174AgAcgCc109109AY.4.10.080383
ORF1ab/nsp3174D174YGacTac104104AY.250.000626
ORF1ab/nsp3174D174delGAC---9393All0.000018
ORF1ab/nsp3174D174DgaCgaT8585B.1.617.20.00032
ORF1ab/nsp3174D174GgAcgGc7171P.1.10.022554
ORF1ab/nsp3174D174EgaCgaA6066All0.000011
ORF1ab/nsp3174D174EgaCgaG666All0.000001
ORF1ab/nsp3174D174GgAcgGc6161B.1.1600.001902
ORF1ab/nsp3174D174DgaCgaT5757B.1.4040.074219
ORF1ab/nsp3174D174DgaCgaT5353B.1.617.10.006835
ORF1ab/nsp3174D174DgaCgaT5151AY.1030.000317
ORF1ab/nsp3174D174NGacAac4747B.1.5260.001105
ORF1ab/nsp3174D174DgaCgaT4646AY.250.000277
ORF1ab/nsp3174D174NGacAac4646AY.40.000072
ORF1ab/nsp3174D174YGacTac4646B.1.617.20.000173
ORF1ab/nsp3174D174GgAcgGc4444AY.4.20.000954
ORF1ab/nsp3174D174GgAcgGc4141AY.40.000064
ORF1ab/nsp3174D174DgaCgaT4141AY.530.011788
ORF1ab/nsp3174D174DgaCgaT4040AY.430.000177
ORF1ab/nsp3174D174DgaCgaT4040AY.440.000243
ORF1ab/nsp3174D174YGacTac3535AY.440.000213
ORF1ab/nsp3174D174YGacTac3535B.1.20.000308
ORF1ab/nsp3174D174YGacTac3434B.1.1.2220.006936
ORF1ab/nsp3174D174DgaCgaT3434B.1.4290.0008
ORF1ab/nsp3174D174DgaCgaT3131AY.34.10.015808
ORF1ab/nsp3174D174DgaCgaT3030B.1.20.000264
ORF1ab/nsp3174D174DgaCgaT2929AY.9.10.002428
ORF1ab/nsp3174D174YGacTac2828AY.470.000871
ORF1ab/nsp3174D174DgaCgaT2828B.10.000256
ORF1ab/nsp3174D174EgaCgaA2728B.1.1.70.000024
ORF1ab/nsp3174D174EgaCgaG128B.1.1.70.000001
ORF1ab/nsp3174D174YGacTac2525AY.4.50.002687
ORF1ab/nsp3174D174DgaCgaT2424B.1.10.000435
ORF1ab/nsp3174D174DgaCgaT2424B.1.3510.000713
ORF1ab/nsp3174D174NGacAac2323AY.4.50.002472
ORF1ab/nsp3174D174DgaCgaT2323P.10.000362
ORF1ab/nsp3174D174DgaCgaT2222AY.1070.010252
ORF1ab/nsp3174D174DgaCgaT2121AY.470.000653
ORF1ab/nsp3174D174DgaCgaT2020AY.1020.00053
ORF1ab/nsp3174D174delGAC---2020AY.4.20.000434
ORF1ab/nsp3174D174YGacTac1919AY.1030.000118
ORF1ab/nsp3174D174DgaCgaT1818B.1.1770.000237
ORF1ab/nsp3174D174YGacTac1717AY.30.000169
ORF1ab/nsp3174D174DgaCgaT1717AY.4.20.000369
ORF1ab/nsp3174D174NGacAac1717AY.430.000075
ORF1ab/nsp3174D174GgAcgGc1717AY.440.000103
ORF1ab/nsp3174D174DgaCgaT1616AY.50.00033
ORF1ab/nsp3174D174YGacTac1616B.1.10.00029
ORF1ab/nsp3174D174GgAcgGc1616B.1.1.70.000014
ORF1ab/nsp3174D174NGacAac1616B.1.2580.001065
ORF1ab/nsp3174D174DgaCgaT1515AY.30.000149
ORF1ab/nsp3174D174DgaCgaT1515AY.390.000371
ORF1ab/nsp3174D174YGacTac1515B.1.1.2940.018987
ORF1ab/nsp3174D174delGAC---1414B.1.1.70.000013
ORF1ab/nsp3174D174NGacAac1414B.1.617.20.000053
ORF1ab/nsp3174D174DgaCgaT1313B.1.177.210.000994
ORF1ab/nsp3174D174DgaCgaT1313B.1.177.810.002461
ORF1ab/nsp3174D174NGacAac1212AY.1190.000424
ORF1ab/nsp3174D174DgaCgaT1212AY.260.00034
ORF1ab/nsp3174D174YGacTac1212AY.9.10.001005
ORF1ab/nsp3174D174YGacTac1212B.1.1600.000374
ORF1ab/nsp3174D174YGacTac1212P.10.000189
ORF1ab/nsp3174D174YGacTac1111AY.420.000443
ORF1ab/nsp3174D174DgaCgaT1111AY.420.000443
ORF1ab/nsp3174D174DgaCgaT1111B.1.177.600.002403
ORF1ab/nsp3174D174DgaCgaT1010AY.3.10.000853
ORF1ab/nsp3174D174DgaCgaT1010AY.330.000668
ORF1ab/nsp3174D174DgaCgaT1010AY.540.000953
ORF1ab/nsp3174D174DgaCgaT1010AY.98.10.000484
ORF1ab/nsp3174D174YGacTac1010B.1.1770.000132
ORF1ab/nsp3174D174GgAcgGc1010B.1.20.000088
ORF1ab/nsp3174D174DgaCgaT99AY.1190.000318
ORF1ab/nsp3174D174DgaCgaT99AY.200.00035
ORF1ab/nsp3174D174AgAcgCc99AY.980.000711
ORF1ab/nsp3174D174YGacTac99B.1.1.2140.000499
ORF1ab/nsp3174D174YGacTac99B.1.1.560.160714
ORF1ab/nsp3174D174YGacTac99B.1.3510.000268
ORF1ab/nsp3174D174NGacAac88AY.1020.000212
ORF1ab/nsp3174D174AgAcgCc88AY.330.000534
ORF1ab/nsp3174D174DgaCgaT88AY.870.006661
ORF1ab/nsp3174D174NGacAac88B.1.10.000145
ORF1ab/nsp3174D174DgaCgaT88B.1.1.4860.012618
ORF1ab/nsp3174D174YGacTac88B.1.1.5190.000318
ORF1ab/nsp3174D174DgaCgaT88B.1.5260.000188
ORF1ab/nsp3174D174EgaCgaA88B.1.617.20.00003
ORF1ab/nsp3174D174YGacTac77AY.1020.000186
ORF1ab/nsp3174D174GgAcgGc77B.1.1.2160.006233
ORF1ab/nsp3174D174DgaCgaT77B.1.5950.001827
ORF1ab/nsp3174D174DgaCgaT77B.1.5960.00061
ORF1ab/nsp3174D174DgaCgaT66AY.1000.000276
ORF1ab/nsp3174D174AgAcgCc66AY.250.000036
ORF1ab/nsp3174D174NGacAac66AY.390.000148
ORF1ab/nsp3174D174DgaCgaT66AY.690.00112
ORF1ab/nsp3174D174EgaCgaA66B.1.10.000109
ORF1ab/nsp3174D174YGacTac66B.1.1.2160.005343
ORF1ab/nsp3174D174AgAcgCc66B.1.1.70.000005
ORF1ab/nsp3174D174YGacTac66B.1.177.730.003398
ORF1ab/nsp3174D174YGacTac66B.1.4590.02449
ORF1ab/nsp3174D174delGAC---55AY.1000.00023
ORF1ab/nsp3174D174YGacTac55AY.1200.000186
ORF1ab/nsp3174D174YGacTac55AY.290.000079
ORF1ab/nsp3174D174DgaCgaT55AY.290.000079
ORF1ab/nsp3174D174AgAcgCc55AY.40.000008
ORF1ab/nsp3174D174DgaCgaT55AY.46.50.000992
ORF1ab/nsp3174D174DgaCgaT55AY.46.60.000361
ORF1ab/nsp3174D174DgaCgaT55AY.620.002179
ORF1ab/nsp3174D174YGacTac55AY.640.002976
ORF1ab/nsp3174D174NGacAac55AY.90.000338
ORF1ab/nsp3174D174YGacTac55AY.90.000338
ORF1ab/nsp3174D174GgAcgGc55B.10.000046
ORF1ab/nsp3174D174delGAC---55B.10.000046
ORF1ab/nsp3174D174DgaCgaT55B.1.1.4030.128205
ORF1ab/nsp3174D174DgaCgaT55B.1.177.160.003322
ORF1ab/nsp3174D174GgAcgGc55B.1.617.20.000019
ORF1ab/nsp3174D174AgAcgCc55B.1.617.20.000019
ORF1ab/nsp3174D174DgaCgaT55B.1.6210.000443
ORF1ab/nsp3174D174DgaCgaT55C.370.00058
ORF1ab/nsp3174D174DgaCgaT55P.20.000933
ORF1ab/nsp3174D174HGacCac44All0.000001
ORF1ab/nsp3174D174DgaCgaT44AY.1180.000251
ORF1ab/nsp3174D174DgaCgaT44AY.1210.000541
ORF1ab/nsp3174D174DgaCgaT44AY.130.000644
ORF1ab/nsp3174D174NGacAac44AY.260.000113
ORF1ab/nsp3174D174DgaCgaT44AY.4.2.10.000596
ORF1ab/nsp3174D174delGAC---44AY.440.000024
ORF1ab/nsp3174D174EgaCgaA34AY.440.000018
ORF1ab/nsp3174D174EgaCgaG14AY.440.000006
ORF1ab/nsp3174D174NGacAac44AY.80.002424
ORF1ab/nsp3174D174YGacTac44AY.80.002424
ORF1ab/nsp3174D174YGacTac44AY.850.001709
ORF1ab/nsp3174D174DgaCgaT44AY.9.20.000147
ORF1ab/nsp3174D174NGacAac44B.10.000037
ORF1ab/nsp3174D174EgaCgaA34B.10.000027
ORF1ab/nsp3174D174EgaCgaG14B.10.000009
ORF1ab/nsp3174D174GgAcgGc44B.1.1.2840.00043
ORF1ab/nsp3174D174DgaCgaT44B.1.1.3180.001207
ORF1ab/nsp3174D174YGacTac44B.1.1.3330.004306
ORF1ab/nsp3174D174DgaCgaT44B.1.1.500.002716
ORF1ab/nsp3174D174DgaCgaT44B.1.1.5190.000159
ORF1ab/nsp3174D174DgaCgaT44B.1.3980.011905
ORF1ab/nsp3174D174AgAcgCc44C.36.30.002269
ORF1ab/nsp3174D174YGacTac44D.20.0003
ORF1ab/nsp3174D174delGAC---44P.10.000063
ORF1ab/nsp3174D174YGacTac33AK.10.037975
ORF1ab/nsp3174D174GgAcgGc33AY.1030.000019
ORF1ab/nsp3174D174YGacTac33AY.1190.000106
ORF1ab/nsp3174D174DgaCgaT33AY.140.000264
ORF1ab/nsp3174D174YGacTac33AY.20.001068
ORF1ab/nsp3174D174DgaCgaT33AY.230.000209
ORF1ab/nsp3174D174DgaCgaT33AY.240.001293
ORF1ab/nsp3174D174YGacTac33AY.320.001597
ORF1ab/nsp3174D174delGAC---33AY.40.000005
ORF1ab/nsp3174D174YGacTac33AY.4.20.000065
ORF1ab/nsp3174D174AgAcgCc33AY.430.000013
ORF1ab/nsp3174D174DgaCgaT33AY.450.000365
ORF1ab/nsp3174D174YGacTac33AY.46.50.000595
ORF1ab/nsp3174D174DgaCgaT33AY.500.002398
ORF1ab/nsp3174D174DgaCgaT33AY.60.000123
ORF1ab/nsp3174D174DgaCgaT33AY.610.000314
ORF1ab/nsp3174D174YGacTac33AY.610.000314
ORF1ab/nsp3174D174DgaCgaT33AY.750.000168
ORF1ab/nsp3174D174DgaCgaT33AY.980.000237
ORF1ab/nsp3174D174DgaCgaT33B.1.1.3260.005282
ORF1ab/nsp3174D174delGAC---33B.1.1.330.001263
ORF1ab/nsp3174D174GgAcgGc33B.1.1.4160.002715
ORF1ab/nsp3174D174YGacTac33B.1.2400.000647
ORF1ab/nsp3174D174YGacTac33B.1.4530.009709
ORF1ab/nsp3174D174NGacAac33B.1.6090.001438
ORF1ab/nsp3174D174NGacAac33P.10.000047
ORF1ab/nsp3174D174YGacTac33P.1.140.000143
ORF1ab/nsp3174D174YGacTac22A.280.005291
ORF1ab/nsp3174D174TGAcACc12All0
ORF1ab/nsp3174D174TGACACG12All0
ORF1ab/nsp3174D174AgAcgCc22AY.1030.000012
ORF1ab/nsp3174D174delGAC---22AY.1030.000012
ORF1ab/nsp3174D174DgaCgaT22AY.1130.000285
ORF1ab/nsp3174D174delGAC---22AY.120.000632
ORF1ab/nsp3174D174NGacAac22AY.1200.000074
ORF1ab/nsp3174D174EgaCgaG22AY.1200.000074
ORF1ab/nsp3174D174YGacTac22AY.1210.000271
ORF1ab/nsp3174D174DgaCgaT22AY.160.000759
ORF1ab/nsp3174D174delGAC---22AY.200.000078
ORF1ab/nsp3174D174YGacTac22AY.200.000078
ORF1ab/nsp3174D174NGacAac22AY.250.000012
ORF1ab/nsp3174D174YGacTac22AY.260.000057
ORF1ab/nsp3174D174DgaCgaT22AY.270.000129
ORF1ab/nsp3174D174AgAcgCc22AY.30.00002
ORF1ab/nsp3174D174YGacTac22AY.3.10.000171
ORF1ab/nsp3174D174YGacTac22AY.340.000194
ORF1ab/nsp3174D174DgaCgaT22AY.360.000296
ORF1ab/nsp3174D174YGacTac22AY.360.000296
ORF1ab/nsp3174D174DgaCgaT22AY.39.20.003082
ORF1ab/nsp3174D174DgaCgaT22AY.460.000208
ORF1ab/nsp3174D174YGacTac22AY.46.10.002053
ORF1ab/nsp3174D174YGacTac22AY.46.40.000329
ORF1ab/nsp3174D174DgaCgaT22AY.5.40.000553
ORF1ab/nsp3174D174YGacTac22AY.580.001815
ORF1ab/nsp3174D174NGacAac22AY.580.001815
ORF1ab/nsp3174D174delGAC---22AY.710.00095
ORF1ab/nsp3174D174YGacTac22AY.75.10.000361
ORF1ab/nsp3174D174AgAcgCc22B.10.000018
ORF1ab/nsp3174D174delGAC---22B.1.10.000036
ORF1ab/nsp3174D174DgaCgaT22B.1.1.1760.000879
ORF1ab/nsp3174D174YGacTac22B.1.1.1890.003026
ORF1ab/nsp3174D174YGacTac22B.1.1.2400.00939
ORF1ab/nsp3174D174YGacTac22B.1.1.250.001137
ORF1ab/nsp3174D174DgaCgaT22B.1.1.2940.002532
ORF1ab/nsp3174D174delGAC---22B.1.1.3480.001592
ORF1ab/nsp3174D174YGacTac22B.1.1.5210.010695
ORF1ab/nsp3174D174DgaCgaT22B.1.1.700.000682
ORF1ab/nsp3174D174DgaCgaT22B.1.1450.105263
ORF1ab/nsp3174D174DgaCgaT22B.1.1460.008475
ORF1ab/nsp3174D174GgAcgGc22B.1.1770.000026
ORF1ab/nsp3174D174DgaCgaT22B.1.177.40.000422
ORF1ab/nsp3174D174YGacTac22B.1.177.710.020202
ORF1ab/nsp3174D174DgaCgaT22B.1.2130.029851
ORF1ab/nsp3174D174YGacTac22B.1.214.20.001199
ORF1ab/nsp3174D174DgaCgaT22B.1.2210.000142
ORF1ab/nsp3174D174DgaCgaT22B.1.2430.000139
ORF1ab/nsp3174D174AgAcgCc22B.1.258.30.00335
ORF1ab/nsp3174D174DgaCgaT22B.1.3360.004878
ORF1ab/nsp3174D174YGacTac22B.1.360.000292
ORF1ab/nsp3174D174NGacAac22B.1.36.380.003284
ORF1ab/nsp3174D174DgaCgaT22B.1.4270.000101
ORF1ab/nsp3174D174YGacTac22B.1.4280.002041
ORF1ab/nsp3174D174YGacTac22B.1.428.20.066667
ORF1ab/nsp3174D174delGAC---22B.1.4290.000047
ORF1ab/nsp3174D174YGacTac22B.1.4560.006536
ORF1ab/nsp3174D174DgaCgaT22B.1.5250.000226
ORF1ab/nsp3174D174GgAcgGc22B.1.5260.000047
ORF1ab/nsp3174D174YGacTac22B.1.5260.000047
ORF1ab/nsp3174D174YGacTac22B.1.5610.000794
ORF1ab/nsp3174D174YGacTac22B.1.5950.000522
ORF1ab/nsp3174D174DgaCgaT22B.1.6310.006734
ORF1ab/nsp3174D174YGacTac22B.1.6340.006849
ORF1ab/nsp3174D174NGacAac22B.1.6370.000146
ORF1ab/nsp3174D174AgAcgCc12B.290.003509
ORF1ab/nsp3174D174AgACgCG12B.290.003509
ORF1ab/nsp3174D174TGACACG12B.290.003509
ORF1ab/nsp3174D174TGAcACc12B.290.003509
ORF1ab/nsp3174D174YGacTac22B.3.10.003317
ORF1ab/nsp3174D174delGAC---22N.60.014184
ORF1ab/nsp3174D174DgaCgaT22P.1.140.000096
ORF1ab/nsp3174D174DgaCgaT22Q.40.00091
ORF1ab/nsp3174D174YGacTac22Q.80.00033
ORF1ab/nsp3174D174YGacTac22R.10.00018
ORF1ab/nsp3174D174YGacTac11A0.000387
ORF1ab/nsp3174D174DgaCgaT11A.2.20.001689
ORF1ab/nsp3174D174YGacTac11A.2.50.000499
ORF1ab/nsp3174D174DgaCgaT11AD.20.000219
ORF1ab/nsp3174D174GgAcgGc11AD.20.000219
ORF1ab/nsp3174D174AgAcgCc11AD.20.000219
ORF1ab/nsp3174D174YGacTac11AD.20.000219
ORF1ab/nsp3174D174KGaCAaG11All0
ORF1ab/nsp3174D174del1GAC-NN11All0
ORF1ab/nsp3174D174YGacTac11AY.1000.000046
ORF1ab/nsp3174D174NGacAac11AY.1000.000046
ORF1ab/nsp3174D174AgAcgCc11AY.1020.000027
ORF1ab/nsp3174D174YGacTac11AY.1050.000643
ORF1ab/nsp3174D174NGacAac11AY.1070.000466
ORF1ab/nsp3174D174delGAC---11AY.1080.001103
ORF1ab/nsp3174D174DgaCgaT11AY.1090.00074
ORF1ab/nsp3174D174DgaCgaT11AY.1100.000113
ORF1ab/nsp3174D174DgaCgaT11AY.1110.000183
ORF1ab/nsp3174D174YGacTac11AY.1160.000287
ORF1ab/nsp3174D174DgaCgaT11AY.1170.000085
ORF1ab/nsp3174D174NGacAac11AY.1180.000063
ORF1ab/nsp3174D174YGacTac11AY.1180.000063
ORF1ab/nsp3174D174delGAC---11AY.1200.000037
ORF1ab/nsp3174D174DgaCgaT11AY.1200.000037
ORF1ab/nsp3174D174YGacTac11AY.130.000161
ORF1ab/nsp3174D174NGacAac11AY.170.008197
ORF1ab/nsp3174D174YGacTac11AY.170.008197
ORF1ab/nsp3174D174NGacAac11AY.200.000039
ORF1ab/nsp3174D174DgaCgaT11AY.210.001898
ORF1ab/nsp3174D174YGacTac11AY.230.00007
ORF1ab/nsp3174D174GgAcgGc11AY.240.000431
ORF1ab/nsp3174D174GgAcgGc11AY.250.000006
ORF1ab/nsp3174D174GgAcgGc11AY.290.000016
ORF1ab/nsp3174D174EgaCgaA11AY.30.00001
ORF1ab/nsp3174D174GgAcgGc11AY.30.00001
ORF1ab/nsp3174D174DgaCgaT11AY.300.000396
ORF1ab/nsp3174D174GgAcgGc11AY.300.000396
ORF1ab/nsp3174D174NGacAac11AY.330.000067
ORF1ab/nsp3174D174EgaCgaA11AY.340.000097
ORF1ab/nsp3174D174DgaCgaT11AY.340.000097
ORF1ab/nsp3174D174GgAcgGc11AY.360.000148
ORF1ab/nsp3174D174YGacTac11AY.390.000025
ORF1ab/nsp3174D174EgaCgaA11AY.40.000002
ORF1ab/nsp3174D174EgaCgaA11AY.4.50.000107
ORF1ab/nsp3174D174DgaCgaT11AY.4.50.000107
ORF1ab/nsp3174D174del1GAC-NN11AY.4.50.000107
ORF1ab/nsp3174D174DgaCgaT11AY.400.000964
ORF1ab/nsp3174D174GgAcgGc11AY.420.00004
ORF1ab/nsp3174D174EgaCgaA11AY.430.000004
ORF1ab/nsp3174D174GgAcgGc11AY.430.000004
ORF1ab/nsp3174D174YGacTac11AY.450.000122
ORF1ab/nsp3174D174NGacAac11AY.450.000122
ORF1ab/nsp3174D174delGAC---11AY.50.000021
ORF1ab/nsp3174D174YGacTac11AY.50.000021
ORF1ab/nsp3174D174YGacTac11AY.500.000799
ORF1ab/nsp3174D174YGacTac11AY.550.000917
ORF1ab/nsp3174D174YGacTac11AY.560.001605
ORF1ab/nsp3174D174NGacAac11AY.590.00053
ORF1ab/nsp3174D174YGacTac11AY.590.00053
ORF1ab/nsp3174D174YGacTac11AY.60.000041
ORF1ab/nsp3174D174GgAcgGc11AY.60.000041
ORF1ab/nsp3174D174DgaCgaT11AY.600.000938
ORF1ab/nsp3174D174delGAC---11AY.610.000105
ORF1ab/nsp3174D174YGacTac11AY.620.000436
ORF1ab/nsp3174D174YGacTac11AY.650.000533
ORF1ab/nsp3174D174YGacTac11AY.70.000196
ORF1ab/nsp3174D174YGacTac11AY.7.10.000113
ORF1ab/nsp3174D174YGacTac11AY.7.20.000559
ORF1ab/nsp3174D174YGacTac11AY.710.000475
ORF1ab/nsp3174D174DgaCgaT11AY.740.000116
ORF1ab/nsp3174D174delGAC---11AY.75.10.00018
ORF1ab/nsp3174D174DgaCgaT11AY.790.001211
ORF1ab/nsp3174D174DgaCgaT11AY.80.000606
ORF1ab/nsp3174D174YGacTac11AY.840.000437
ORF1ab/nsp3174D174DgaCgaT11AY.860.00083
ORF1ab/nsp3174D174NGacAac11AY.870.000833
ORF1ab/nsp3174D174YGacTac11AY.870.000833
ORF1ab/nsp3174D174delGAC---11AY.90.000068
ORF1ab/nsp3174D174DgaCgaT11AY.920.000287
ORF1ab/nsp3174D174DgaCgaT11AY.950.000761
ORF1ab/nsp3174D174GgAcgGc11AY.980.000079
ORF1ab/nsp3174D174NGacAac11AY.980.000079
ORF1ab/nsp3174D174YGacTac11AY.99.20.000092
ORF1ab/nsp3174D174NGacAac11AY.99.20.000092
ORF1ab/nsp3174D174YGacTac11AZ.20.000821
ORF1ab/nsp3174D174DgaCgaT11AZ.30.00152
ORF1ab/nsp3174D174DgaCgaT11B0.000128
ORF1ab/nsp3174D174HGacCac11B.10.000009
ORF1ab/nsp3174D174NGacAac11B.1.1.10.000327
ORF1ab/nsp3174D174DgaCgaT11B.1.1.100.001115
ORF1ab/nsp3174D174YGacTac11B.1.1.1570.000913
ORF1ab/nsp3174D174YGacTac11B.1.1.1590.004673
ORF1ab/nsp3174D174EgaCgaA11B.1.1.1590.004673
ORF1ab/nsp3174D174YGacTac11B.1.1.1920.002309
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2140.000055
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2160.00089
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2210.010101
ORF1ab/nsp3174D174GgAcgGc11B.1.1.2220.000204
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2250.007194
ORF1ab/nsp3174D174DgaCgaT11B.1.1.250.000569
ORF1ab/nsp3174D174YGacTac11B.1.1.2740.005051
ORF1ab/nsp3174D174YGacTac11B.1.1.280.000311
ORF1ab/nsp3174D174delGAC---11B.1.1.2840.000107
ORF1ab/nsp3174D174DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp3174D174YGacTac11B.1.1.3060.000438
ORF1ab/nsp3174D174DgaCgaT11B.1.1.3060.000438
ORF1ab/nsp3174D174YGacTac11B.1.1.3170.000412
ORF1ab/nsp3174D174DgaCgaT11B.1.1.3890.006061
ORF1ab/nsp3174D174DgaCgaT11B.1.1.4160.000905
ORF1ab/nsp3174D174NGacAac11B.1.1.4340.000349
ORF1ab/nsp3174D174HGacCac11B.1.1.470.005348
ORF1ab/nsp3174D174DgaCgaT11B.1.1.4850.016667
ORF1ab/nsp3174D174delGAC---11B.1.1.500.000679
ORF1ab/nsp3174D174YGacTac11B.1.1.5140.038462
ORF1ab/nsp3174D174YGacTac11B.1.1.630.000386
ORF1ab/nsp3174D174NGacAac11B.1.1280.000635
ORF1ab/nsp3174D174YGacTac11B.1.1470.000756
ORF1ab/nsp3174D174NGacAac11B.1.1600.000031
ORF1ab/nsp3174D174DgaCgaT11B.1.1600.000031
ORF1ab/nsp3174D174EgaCgaA11B.1.1600.000031
ORF1ab/nsp3174D174YGacTac11B.1.1660.008475
ORF1ab/nsp3174D174DgaCgaT11B.1.177.120.000152
ORF1ab/nsp3174D174DgaCgaT11B.1.177.200.001517
ORF1ab/nsp3174D174DgaCgaT11B.1.177.230.003236
ORF1ab/nsp3174D174HGacCac11B.1.177.230.003236
ORF1ab/nsp3174D174EgaCgaA11B.1.177.390.015385
ORF1ab/nsp3174D174YGacTac11B.1.177.460.000918
ORF1ab/nsp3174D174YGacTac11B.1.177.520.001757
ORF1ab/nsp3174D174YGacTac11B.1.177.560.000668
ORF1ab/nsp3174D174DgaCgaT11B.1.177.710.010101
ORF1ab/nsp3174D174DgaCgaT11B.1.177.750.001041
ORF1ab/nsp3174D174delGAC---11B.1.177.80.000752
ORF1ab/nsp3174D174YGacTac11B.1.177.800.001912
ORF1ab/nsp3174D174delGAC---11B.1.177.830.001481
ORF1ab/nsp3174D174delGAC---11B.1.177.860.000183
ORF1ab/nsp3174D174DgaCgaT11B.1.177.870.000728
ORF1ab/nsp3174D174NGacAac11B.1.20.000009
ORF1ab/nsp3174D174delGAC---11B.1.2100.002132
ORF1ab/nsp3174D174DgaCgaT11B.1.220.001318
ORF1ab/nsp3174D174DgaCgaT11B.1.2340.000132
ORF1ab/nsp3174D174NGacAac11B.1.2430.00007
ORF1ab/nsp3174D174DgaCgaT11B.1.2580.000067
ORF1ab/nsp3174D174DgaCgaT11B.1.258.110.000396
ORF1ab/nsp3174D174DgaCgaT11B.1.258.170.000104
ORF1ab/nsp3174D174DgaCgaT11B.1.3110.000275
ORF1ab/nsp3174D174YGacTac11B.1.3130.006579
ORF1ab/nsp3174D174DgaCgaT11B.1.351.20.000303
ORF1ab/nsp3174D174DgaCgaT11B.1.351.30.000876
ORF1ab/nsp3174D174YGacTac11B.1.351.30.000876
ORF1ab/nsp3174D174NGacAac11B.1.351.50.0006
ORF1ab/nsp3174D174DgaCgaT11B.1.3560.001727
ORF1ab/nsp3174D174DgaCgaT11B.1.36.290.000517
ORF1ab/nsp3174D174DgaCgaT11B.1.36.80.001
ORF1ab/nsp3174D174YGacTac11B.1.3980.002976
ORF1ab/nsp3174D174YGacTac11B.1.4110.003704
ORF1ab/nsp3174D174NGacAac11B.1.4160.001269
ORF1ab/nsp3174D174DgaCgaT11B.1.4200.010417
ORF1ab/nsp3174D174delGAC---11B.1.4270.00005
ORF1ab/nsp3174D174NGacAac11B.1.4270.00005
ORF1ab/nsp3174D174NGacAac11B.1.4290.000024
ORF1ab/nsp3174D174DgaCgaT11B.1.466.20.000391
ORF1ab/nsp3174D174GgAcgGc11B.1.5090.000866
ORF1ab/nsp3174D174DgaCgaT11B.1.5090.000866
ORF1ab/nsp3174D174YGacTac11B.1.5250.000113
ORF1ab/nsp3174D174EgaCgaA11B.1.5410.004425
ORF1ab/nsp3174D174NGacAac11B.1.5410.004425
ORF1ab/nsp3174D174DgaCgaT11B.1.5640.000426
ORF1ab/nsp3174D174DgaCgaT11B.1.5770.000687
ORF1ab/nsp3174D174YGacTac11B.1.5770.000687
ORF1ab/nsp3174D174GgAcgGc11B.1.5960.000087
ORF1ab/nsp3174D174YGacTac11B.1.5960.000087
ORF1ab/nsp3174D174YGacTac11B.1.5990.00365
ORF1ab/nsp3174D174NGacAac11B.1.5990.00365
ORF1ab/nsp3174D174YGacTac11B.1.617.10.000129
ORF1ab/nsp3174D174delGAC---11B.1.617.20.000004
ORF1ab/nsp3174D174DgaCgaT11B.1.6190.000871
ORF1ab/nsp3174D174delGAC---11B.1.6210.000089
ORF1ab/nsp3174D174YGacTac11B.1.6210.000089
ORF1ab/nsp3174D174DgaCgaT11B.1.6280.000352
ORF1ab/nsp3174D174YGacTac11B.1.6370.000073
ORF1ab/nsp3174D174DgaCgaT11B.1.9.50.005682
ORF1ab/nsp3174D174KGaCAaG11B.290.003509
ORF1ab/nsp3174D174EgaCgaG11B.290.003509
ORF1ab/nsp3174D174NGacAac11B.290.003509
ORF1ab/nsp3174D174delGAC---11B.340.013699
ORF1ab/nsp3174D174NGacAac11B.390.002331
ORF1ab/nsp3174D174delGAC---11C.170.055556
ORF1ab/nsp3174D174EgaCgaA11C.320.023256
ORF1ab/nsp3174D174GgAcgGc11C.370.000116
ORF1ab/nsp3174D174YGacTac11C.370.000116
ORF1ab/nsp3174D174HGacCac11D.20.000075
ORF1ab/nsp3174D174DgaCgaT11D.20.000075
ORF1ab/nsp3174D174YGacTac11D.50.004975
ORF1ab/nsp3174D174GgAcgGc11P.10.000016
ORF1ab/nsp3174D174EgaCgaA11P.1.140.000048
ORF1ab/nsp3174D174DgaCgaT11P.1.150.000232
ORF1ab/nsp3174D174DgaCgaT11P.1.170.000162
ORF1ab/nsp3174D174YGacTac11P.1.170.000162
ORF1ab/nsp3174D174DgaCgaT11P.1.20.001156
ORF1ab/nsp3174D174EgaCgaA11P.1.20.001156
ORF1ab/nsp3174D174YGacTac11P.70.004367
ORF1ab/nsp3174D174EgaCgaA11Q.40.000455
ORF1ab/nsp3174D174delGAC---11R.10.00009
ORF1ab/nsp3174D174delGAC---11U.20.008772