CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1739 & Codon = gcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31739A1739AA2557AsyngcGgcC137933800.02755027934-7936

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31739A1739AgcGgcC38013793All0.000073
ORF1ab/nsp31739A1739AgcGgcC252848B.1.617.20.000094
ORF1ab/nsp31739A1739AgcGgcC101491AY.1030.000062
ORF1ab/nsp31739A1739AgcGgcC691058B.1.1.70.000062
ORF1ab/nsp31739A1739AgcGgcC33423AY.40.000051
ORF1ab/nsp31739A1739AgcGgcC3374AY.420.000121
ORF1ab/nsp31739A1739AgcGgcC6341B.1.20.000053
ORF1ab/nsp31739A1739AgcGgcC1340B.1.2650.001271
ORF1ab/nsp31739A1739AgcGgcC6293AY.430.000027
ORF1ab/nsp31739A1739AgcGgcC1253P.10.000016
ORF1ab/nsp31739A1739AgcGgcC4180AY.1020.000106
ORF1ab/nsp31739A1739AgcGgcC16152AY.390.000395
ORF1ab/nsp31739A1739AgcGgcC2130B.10.000018
ORF1ab/nsp31739A1739AgcGgcC6120AY.440.000037
ORF1ab/nsp31739A1739AgcGgcC5119R.10.00045
ORF1ab/nsp31739A1739AgcGgcC33112AY.250.000198
ORF1ab/nsp31739A1739AgcGgcC388AY.9.10.000251
ORF1ab/nsp31739A1739AgcGgcC7379AY.710.034679
ORF1ab/nsp31739A1739AgcGgcC374B.1.10.000054
ORF1ab/nsp31739A1739AgcGgcC366AY.30.00003
ORF1ab/nsp31739A1739AgcGgcC134B.1.3510.00003
ORF1ab/nsp31739A1739AgcGgcC133B.1.1.2220.000204
ORF1ab/nsp31739A1739AgcGgcC231AY.200.000078
ORF1ab/nsp31739A1739AgcGgcC129B.1.5260.000024
ORF1ab/nsp31739A1739AgcGgcC224AY.230.000139
ORF1ab/nsp31739A1739AgcGgcC123AY.290.000016
ORF1ab/nsp31739A1739AgcGgcC122AY.3.10.000085
ORF1ab/nsp31739A1739AgcGgcC120AY.1210.000135
ORF1ab/nsp31739A1739AgcGgcC220AY.260.000057
ORF1ab/nsp31739A1739AgcGgcC318AY.1190.000106
ORF1ab/nsp31739A1739AgcGgcC1717B.1.1.890.10303
ORF1ab/nsp31739A1739AgcGgcC116AY.470.000031
ORF1ab/nsp31739A1739AgcGgcC414AY.670.001857
ORF1ab/nsp31739A1739AgcGgcC213AY.680.000547
ORF1ab/nsp31739A1739AgcGgcC111AY.60.000041
ORF1ab/nsp31739A1739AgcGgcC111B.1.617.10.000129
ORF1ab/nsp31739A1739AgcGgcC19AY.39.10.00004
ORF1ab/nsp31739A1739AgcGgcC99B.1.4861
ORF1ab/nsp31739A1739AgcGgcC17B.1.6210.000089
ORF1ab/nsp31739A1739AgcGgcC56AY.380.002496
ORF1ab/nsp31739A1739AgcGgcC15AY.5.30.000337
ORF1ab/nsp31739A1739AgcGgcC35B.1.1.280.000934
ORF1ab/nsp31739A1739AgcGgcC35B.1.36.80.003
ORF1ab/nsp31739A1739AgcGgcC14AY.360.000148
ORF1ab/nsp31739A1739AgcGgcC14B.1.1.2140.000055
ORF1ab/nsp31739A1739AgcGgcC13AD.20.000219
ORF1ab/nsp31739A1739AgcGgcC23B.1.1.250.001137
ORF1ab/nsp31739A1739AgcGgcC12AY.90.000068
ORF1ab/nsp31739A1739AgcGgcC12B.1.1.2160.00089
ORF1ab/nsp31739A1739AgcGgcC22P.1.150.000465
ORF1ab/nsp31739A1739AgcGgcC12P.60.003145
ORF1ab/nsp31739A1739AgcGgcC11AY.23.10.000417
ORF1ab/nsp31739A1739AgcGgcC11AY.4.2.10.000149
ORF1ab/nsp31739A1739AgcGgcC11B.1.1.2840.000107
ORF1ab/nsp31739A1739AgcGgcC11P.1.100.000269