CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1717 & Codon = tcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31717S1717SS2535SsyntcAtcT1103680.061657868-7870

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31717S1717StcAtcT681103All0.000013
ORF1ab/nsp31717S1717StcAtcT35414B.1.1.70.000031
ORF1ab/nsp31717S1717StcAtcT454AY.40.000006
ORF1ab/nsp31717S1717StcAtcT223B.10.000018
ORF1ab/nsp31717S1717StcAtcT115AY.430.000004
ORF1ab/nsp31717S1717StcAtcT113AY.200.000039
ORF1ab/nsp31717S1717StcAtcT1313B.1.1.1760.005712
ORF1ab/nsp31717S1717StcAtcT13AY.3.10.000085
ORF1ab/nsp31717S1717StcAtcT13AY.4.20.000022
ORF1ab/nsp31717S1717StcAtcT13B.1.10.000018
ORF1ab/nsp31717S1717StcAtcT33Q.10.000379
ORF1ab/nsp31717S1717StcAtcT12AY.230.00007
ORF1ab/nsp31717S1717StcAtcT12B.1.177.40.000211
ORF1ab/nsp31717S1717StcAtcT11AY.620.000436
ORF1ab/nsp31717S1717StcAtcT11B.1.1.100.001115
ORF1ab/nsp31717S1717StcAtcT11B.310.003731
ORF1ab/nsp31717S1717StcAtcT11P.1.10.000318