CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1711

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31711A1711VA2529VnonsyngCtgTt7197777197740.9999967850-7852
ORF1ab/nsp31711A1711VA2529VnonsyngCTgTC71977730.000004167967850-7852
ORF1ab/nsp31711A1711TA2529TnonsynGctAct2902880.9931037850-7852
ORF1ab/nsp31711A1711TA2529TnonsynGcTAcA29010.003448287850-7852
ORF1ab/nsp31711A1711TA2529TnonsynGcTAcC29010.003448287850-7852
ORF1ab/nsp31711A1711SA2529SnonsynGctTct1171160.9914537850-7852
ORF1ab/nsp31711A1711SA2529SnonsynGCtAGt11710.008547017850-7852
ORF1ab/nsp31711A1711delA2529deldelGCT---909017850-7852
ORF1ab/nsp31711A1711AA2529AsyngcTgcC88720.8181827850-7852
ORF1ab/nsp31711A1711AA2529AsyngcTgcA88150.1704557850-7852
ORF1ab/nsp31711A1711AA2529AsyngcTgcG8810.01136367850-7852
ORF1ab/nsp31711A1711del1A2529del1delGct-ct81800.9876547850-7852
ORF1ab/nsp31711A1711del1A2529del1delgCtg-t8110.01234577850-7852
ORF1ab/nsp31711A1711FA2529FnonsynGCtTTt777717850-7852
ORF1ab/nsp31711A1711GA2529GnonsyngCtgGt15130.8666677850-7852
ORF1ab/nsp31711A1711GA2529GnonsyngCTgGA1520.1333337850-7852
ORF1ab/nsp31711A1711IA2529InonsynGCtATt760.8571437850-7852
ORF1ab/nsp31711A1711IA2529InonsynGCTATC710.1428577850-7852
ORF1ab/nsp31711A1711DA2529DnonsyngCtgAt3317850-7852
ORF1ab/nsp31711A1711PA2529PnonsynGctCct3317850-7852
ORF1ab/nsp31711A1711CA2529CnonsynGCtTGt1117850-7852
ORF1ab/nsp31711A1711EA2529EnonsyngCTgAG1117850-7852

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31711A1711VgCtgTt719774719777All0.137665
ORF1ab/nsp31711A1711VgCTgTC3719777All0.000001
ORF1ab/nsp31711A1711VgCtgTt642496642498AY.40.999995
ORF1ab/nsp31711A1711VgCTgTC2642498AY.40.000003
ORF1ab/nsp31711A1711VgCtgTt4610746107AY.4.21
ORF1ab/nsp31711A1711VgCtgTt90769076AY.4.50.975599
ORF1ab/nsp31711A1711VgCtgTt65246524AY.4.2.10.97199
ORF1ab/nsp31711A1711VgCtgTt31093109AY.430.013774
ORF1ab/nsp31711A1711VgCtgTt23182318AY.4.40.948445
ORF1ab/nsp31711A1711VgCtgTt16041604B.1.617.20.00604
ORF1ab/nsp31711A1711VgCtgTt15061506B.1.1.70.001348
ORF1ab/nsp31711A1711VgCtgTt14201420AY.420.057127
ORF1ab/nsp31711A1711VgCtgTt13561356AY.4.11
ORF1ab/nsp31711A1711VgCtgTt10881088AY.4.30.915825
ORF1ab/nsp31711A1711VgCtgTt325325AY.410.095532
ORF1ab/nsp31711A1711TGctAct288290All0.000055
ORF1ab/nsp31711A1711TGcTAcC1290All0
ORF1ab/nsp31711A1711TGcTAcA1290All0
ORF1ab/nsp31711A1711VgCtgTt208208B.1.5610.082572
ORF1ab/nsp31711A1711VgCtgTt205205B.10.001878
ORF1ab/nsp31711A1711VgCtgTt204204W.20.985507
ORF1ab/nsp31711A1711VgCtgTt168168N.91
ORF1ab/nsp31711A1711VgCtgTt158158B.1.1.700.053888
ORF1ab/nsp31711A1711VgCtgTt124124B.1.20.001092
ORF1ab/nsp31711A1711VgCtgTt121121P.10.001906
ORF1ab/nsp31711A1711SGctTct116117All0.000022
ORF1ab/nsp31711A1711SGCtAGt1117All0
ORF1ab/nsp31711A1711VgCtgTt104104B.1.1770.001369
ORF1ab/nsp31711A1711VgCtgTt9595B.1.1.3391
ORF1ab/nsp31711A1711delGCT---9090All0.000017
ORF1ab/nsp31711A1711AgcTgcC7288All0.000014
ORF1ab/nsp31711A1711AgcTgcA1588All0.000003
ORF1ab/nsp31711A1711AgcTgcG188All0
ORF1ab/nsp31711A1711VgCtgTt8888AY.440.000536
ORF1ab/nsp31711A1711VgCtgTt8484B.1.1651
ORF1ab/nsp31711A1711del1Gct-ct8081All0.000015
ORF1ab/nsp31711A1711del1gCtg-t181All0
ORF1ab/nsp31711A1711FGCtTTt7777All0.000015
ORF1ab/nsp31711A1711FGCtTTt7777B.1.617.20.00029
ORF1ab/nsp31711A1711VgCtgTt7171AY.46.60.005127
ORF1ab/nsp31711A1711VgCtgTt6969AY.620.030065
ORF1ab/nsp31711A1711del1Gct-ct6666B.1.1.70.000059
ORF1ab/nsp31711A1711TGctAct5757B.1.1770.000751
ORF1ab/nsp31711A1711VgCtgTt5454B.1.10.00098
ORF1ab/nsp31711A1711TGctAct4949B.1.1.70.000044
ORF1ab/nsp31711A1711TGctAct4949P.10.000772
ORF1ab/nsp31711A1711VgCtgTt4848B.1.36.290.024832
ORF1ab/nsp31711A1711VgCtgTt4646AY.1020.00122
ORF1ab/nsp31711A1711delGCT---4242B.1.1.70.000038
ORF1ab/nsp31711A1711VgCtgTt4242B.1.5700.123529
ORF1ab/nsp31711A1711VgCtgTt3939AY.9.10.003265
ORF1ab/nsp31711A1711VgCtgTt3939B.1.5250.004413
ORF1ab/nsp31711A1711VgCtgTt3737AY.460.003851
ORF1ab/nsp31711A1711VgCtgTt3737AY.540.003528
ORF1ab/nsp31711A1711VgCtgTt3535AY.390.000865
ORF1ab/nsp31711A1711VgCtgTt3535B.1.5960.00305
ORF1ab/nsp31711A1711VgCtgTt3434AY.1200.001264
ORF1ab/nsp31711A1711VgCtgTt3434C.350.026316
ORF1ab/nsp31711A1711VgCtgTt3131B.1.3510.000922
ORF1ab/nsp31711A1711VgCtgTt2828B.1.5260.000658
ORF1ab/nsp31711A1711VgCtgTt2727B.1.2100.057569
ORF1ab/nsp31711A1711TGctAct2525B.1.617.20.000094
ORF1ab/nsp31711A1711VgCtgTt2525B.6.60.022222
ORF1ab/nsp31711A1711VgCtgTt2424B.1.1.4340.008365
ORF1ab/nsp31711A1711AgcTgcC1523B.1.1.70.000013
ORF1ab/nsp31711A1711AgcTgcA823B.1.1.70.000007
ORF1ab/nsp31711A1711VgCtgTt2323B.1.177.750.023933
ORF1ab/nsp31711A1711VgCtgTt2222AY.260.000623
ORF1ab/nsp31711A1711VgCtgTt2222AY.46.10.022587
ORF1ab/nsp31711A1711VgCtgTt1818AY.50.000372
ORF1ab/nsp31711A1711VgCtgTt1818B.1.6280.006342
ORF1ab/nsp31711A1711VgCtgTt1818P.1.150.004182
ORF1ab/nsp31711A1711VgCtgTt1717B.1.1.2220.003468
ORF1ab/nsp31711A1711GgCtgGt1315All0.000002
ORF1ab/nsp31711A1711GgCTgGA215All0
ORF1ab/nsp31711A1711VgCtgTt1515B.1.1.500.010183
ORF1ab/nsp31711A1711SGctTct1515B.1.617.20.000056
ORF1ab/nsp31711A1711VgCtgTt1414AY.60.000576
ORF1ab/nsp31711A1711SGctTct1414P.1.140.000669
ORF1ab/nsp31711A1711VgCtgTt1313AY.450.001582
ORF1ab/nsp31711A1711VgCtgTt1313P.1.140.000621
ORF1ab/nsp31711A1711TGctAct1212AY.330.000801
ORF1ab/nsp31711A1711GgCtgGt1212AY.9.20.000441
ORF1ab/nsp31711A1711VgCtgTt1111B.1.1.3180.003319
ORF1ab/nsp31711A1711VgCtgTt1111B.1.6210.000974
ORF1ab/nsp31711A1711SGctTct1010AY.250.00006
ORF1ab/nsp31711A1711VgCtgTt1010B.1.1600.000312
ORF1ab/nsp31711A1711SGctTct99AY.440.000055
ORF1ab/nsp31711A1711SGctTct99B.1.1.70.000008
ORF1ab/nsp31711A1711VgCtgTt99B.1.1390.006598
ORF1ab/nsp31711A1711VgCtgTt99B.1.2210.000639
ORF1ab/nsp31711A1711VgCtgTt88AD.20.001752
ORF1ab/nsp31711A1711TGctAct88AY.340.000776
ORF1ab/nsp31711A1711VgCtgTt88B.1.1.3120.015296
ORF1ab/nsp31711A1711SGctTct88B.1.4290.000188
ORF1ab/nsp31711A1711VgCtgTt88C.370.000929
ORF1ab/nsp31711A1711IGCtATt67All0.000001
ORF1ab/nsp31711A1711IGCTATC17All0
ORF1ab/nsp31711A1711AgcTgcC77AY.440.000043
ORF1ab/nsp31711A1711VgCtgTt77AY.590.003708
ORF1ab/nsp31711A1711TGctAct77B.1.1.390.003568
ORF1ab/nsp31711A1711VgCtgTt77B.1.1.3930.777778
ORF1ab/nsp31711A1711TGctAct77B.1.1.5190.000278
ORF1ab/nsp31711A1711AgcTgcC77B.1.177.450.002669
ORF1ab/nsp31711A1711VgCtgTt77B.1.177.600.001529
ORF1ab/nsp31711A1711VgCtgTt77B.1.617.10.000903
ORF1ab/nsp31711A1711delGCT---77B.1.617.20.000026
ORF1ab/nsp31711A1711VgCtgTt77Z.10.020231
ORF1ab/nsp31711A1711VgCtgTt66A.2.50.002994
ORF1ab/nsp31711A1711VgCtgTt66AY.5.30.002024
ORF1ab/nsp31711A1711TGctAct66B.10.000055
ORF1ab/nsp31711A1711AgcTgcC36B.10.000027
ORF1ab/nsp31711A1711AgcTgcA26B.10.000018
ORF1ab/nsp31711A1711AgcTgcG16B.10.000009
ORF1ab/nsp31711A1711SGctTct56B.1.10.000091
ORF1ab/nsp31711A1711SGCtAGt16B.1.10.000018
ORF1ab/nsp31711A1711VgCtgTt66B.310.022388
ORF1ab/nsp31711A1711VgCtgTt66B.400.002186
ORF1ab/nsp31711A1711VgCtgTt55AY.1190.000177
ORF1ab/nsp31711A1711VgCtgTt55AY.34.10.00255
ORF1ab/nsp31711A1711VgCtgTt55AY.630.001934
ORF1ab/nsp31711A1711VgCtgTt55AY.740.000578
ORF1ab/nsp31711A1711SGctTct55AY.750.00028
ORF1ab/nsp31711A1711VgCtgTt55AY.90.000338
ORF1ab/nsp31711A1711VgCtgTt55AY.98.10.000242
ORF1ab/nsp31711A1711VgCtgTt55B.1.1.3690.002231
ORF1ab/nsp31711A1711VgCtgTt55B.1.177.560.003338
ORF1ab/nsp31711A1711AgcTgcC55B.1.617.20.000019
ORF1ab/nsp31711A1711IGCtATt340.166667
ORF1ab/nsp31711A1711TGctAct340.166667
ORF1ab/nsp31711A1711AgcTgcA240.111111
ORF1ab/nsp31711A1711AgcTgcC240.111111
ORF1ab/nsp31711A1711IGCTATC140.055556
ORF1ab/nsp31711A1711TGcTAcC140.055556
ORF1ab/nsp31711A1711VgCtgTt44AY.1030.000025
ORF1ab/nsp31711A1711VgCtgTt44AY.1170.000338
ORF1ab/nsp31711A1711VgCtgTt44AY.1180.000251
ORF1ab/nsp31711A1711SGctTct44AY.330.000267
ORF1ab/nsp31711A1711SGctTct44AY.430.000018
ORF1ab/nsp31711A1711TGctAct44AY.440.000024
ORF1ab/nsp31711A1711VgCtgTt44AY.530.00115
ORF1ab/nsp31711A1711TGctAct44AY.540.000381
ORF1ab/nsp31711A1711VgCtgTt44AY.980.000316
ORF1ab/nsp31711A1711VgCtgTt44B.1.1.280.001245
ORF1ab/nsp31711A1711TGctAct44B.1.36.90.012862
ORF1ab/nsp31711A1711VgCtgTt44P.1.100.001078
ORF1ab/nsp31711A1711AgcTgcC33A.190.028302
ORF1ab/nsp31711A1711DgCtgAt33All0.000001
ORF1ab/nsp31711A1711PGctCct33All0.000001
ORF1ab/nsp31711A1711TGctAct33AY.1020.00008
ORF1ab/nsp31711A1711VgCtgTt33AY.230.000209
ORF1ab/nsp31711A1711AgcTgcC33AY.250.000018
ORF1ab/nsp31711A1711SGctTct33AY.30.00003
ORF1ab/nsp31711A1711AgcTgcC33AY.30.00003
ORF1ab/nsp31711A1711TGctAct33AY.380.001498
ORF1ab/nsp31711A1711TGctAct33AY.50.000062
ORF1ab/nsp31711A1711VgCtgTt33AY.920.000862
ORF1ab/nsp31711A1711VgCtgTt33AY.930.000819
ORF1ab/nsp31711A1711TGctAct33AY.99.20.000276
ORF1ab/nsp31711A1711TGctAct23B.1.10.000036
ORF1ab/nsp31711A1711TGcTAcA13B.1.10.000018
ORF1ab/nsp31711A1711VgCtgTt33B.1.1.250.001706
ORF1ab/nsp31711A1711VgCtgTt33B.1.1.460.0131
ORF1ab/nsp31711A1711del1Gct-ct33B.1.177.820.001432
ORF1ab/nsp31711A1711TGctAct33B.1.20.000026
ORF1ab/nsp31711A1711del1Gct-ct33B.1.3510.000089
ORF1ab/nsp31711A1711VgCtgTt33B.1.3750.002459
ORF1ab/nsp31711A1711VgCtgTt33B.1.4970.000944
ORF1ab/nsp31711A1711VgCtgTt33B.1.5090.002597
ORF1ab/nsp31711A1711AgcTgcC23B.1.5960.000174
ORF1ab/nsp31711A1711AgcTgcA13B.1.5960.000087
ORF1ab/nsp31711A1711IGCtATt33B.1.617.20.000011
ORF1ab/nsp31711A1711VgCtgTt33D.20.000225
ORF1ab/nsp31711A1711VgCtgTt33P.1.20.003468
ORF1ab/nsp31711A1711VgCtgTt33P.20.00056
ORF1ab/nsp31711A1711GgCTgGA220.111111
ORF1ab/nsp31711A1711delGCT---220.111111
ORF1ab/nsp31711A1711VgCTgTC120.055556
ORF1ab/nsp31711A1711VgCtgTt120.055556
ORF1ab/nsp31711A1711VgCtgTt22A.20.001324
ORF1ab/nsp31711A1711SGctTct22A.2.50.000998
ORF1ab/nsp31711A1711VgCtgTt22A.23.10.001408
ORF1ab/nsp31711A1711VgCtgTt22AY.100.00106
ORF1ab/nsp31711A1711TGctAct22AY.1000.000092
ORF1ab/nsp31711A1711AgcTgcC22AY.1020.000053
ORF1ab/nsp31711A1711SGctTct22AY.1020.000053
ORF1ab/nsp31711A1711SGctTct22AY.1030.000012
ORF1ab/nsp31711A1711VgCtgTt22AY.1090.001479
ORF1ab/nsp31711A1711TGctAct22AY.110.002677
ORF1ab/nsp31711A1711VgCtgTt22AY.1100.000225
ORF1ab/nsp31711A1711VgCtgTt22AY.270.000129
ORF1ab/nsp31711A1711TGctAct22AY.30.00002
ORF1ab/nsp31711A1711VgCtgTt22AY.30.00002
ORF1ab/nsp31711A1711AgcTgcC22AY.430.000009
ORF1ab/nsp31711A1711delGCT---22AY.440.000012
ORF1ab/nsp31711A1711delGCT---22AY.46.20.001271
ORF1ab/nsp31711A1711del1Gct-ct22AY.520.001629
ORF1ab/nsp31711A1711VgCtgTt22AY.580.001815
ORF1ab/nsp31711A1711VgCtgTt22AY.610.00021
ORF1ab/nsp31711A1711AgcTgcC22AY.720.002721
ORF1ab/nsp31711A1711VgCtgTt22AY.75.10.000361
ORF1ab/nsp31711A1711VgCtgTt22AY.870.001665
ORF1ab/nsp31711A1711VgCtgTt22AY.9.20.000073
ORF1ab/nsp31711A1711AgcTgcC22AY.9.20.000073
ORF1ab/nsp31711A1711VgCtgTt22B0.000256
ORF1ab/nsp31711A1711SGctTct22B.10.000018
ORF1ab/nsp31711A1711delGCT---22B.10.000018
ORF1ab/nsp31711A1711AgcTgcA12B.1.10.000018
ORF1ab/nsp31711A1711AgcTgcC12B.1.10.000018
ORF1ab/nsp31711A1711SGctTct22B.1.1.10.000653
ORF1ab/nsp31711A1711SGctTct22B.1.1.2140.000111
ORF1ab/nsp31711A1711VgCtgTt22B.1.1.2190.01
ORF1ab/nsp31711A1711delGCT---22B.1.1.2360.013793
ORF1ab/nsp31711A1711VgCtgTt22B.1.1.2940.002532
ORF1ab/nsp31711A1711VgCtgTt22B.1.1.3720.001377
ORF1ab/nsp31711A1711VgCtgTt22B.1.1.4620.017241
ORF1ab/nsp31711A1711del1Gct-ct22B.1.1600.000062
ORF1ab/nsp31711A1711TGctAct22B.1.1600.000062
ORF1ab/nsp31711A1711AgcTgcC22B.1.1600.000062
ORF1ab/nsp31711A1711delGCT---22B.1.1770.000026
ORF1ab/nsp31711A1711VgCtgTt22B.1.177.210.000153
ORF1ab/nsp31711A1711VgCtgTt22B.1.177.440.001038
ORF1ab/nsp31711A1711VgCtgTt22B.1.177.570.000562
ORF1ab/nsp31711A1711VgCtgTt22B.1.177.650.001331
ORF1ab/nsp31711A1711delGCT---22B.1.2580.000133
ORF1ab/nsp31711A1711AgcTgcC22B.1.5260.000047
ORF1ab/nsp31711A1711VgCtgTt22B.1.5770.001375
ORF1ab/nsp31711A1711VgCtgTt22B.390.004662
ORF1ab/nsp31711A1711TGctAct22D.20.00015
ORF1ab/nsp31711A1711SGctTct22P.10.000032
ORF1ab/nsp31711A1711TGctAct22P.1.10.000635
ORF1ab/nsp31711A1711VgCtgTt22Q.10.000253
ORF1ab/nsp31711A1711delGCT---11A0.000387
ORF1ab/nsp31711A1711TGctAct11A.10.000282
ORF1ab/nsp31711A1711VgCtgTt11A.280.002646
ORF1ab/nsp31711A1711EgCTgAG11All0
ORF1ab/nsp31711A1711CGCtTGt11All0
ORF1ab/nsp31711A1711AgcTgcA11AY.100.00053
ORF1ab/nsp31711A1711AgcTgcC11AY.1000.000046
ORF1ab/nsp31711A1711delGCT---11AY.1030.000006
ORF1ab/nsp31711A1711TGctAct11AY.1030.000006
ORF1ab/nsp31711A1711AgcTgcC11AY.1030.000006
ORF1ab/nsp31711A1711VgCtgTt11AY.1040.001984
ORF1ab/nsp31711A1711VgCtgTt11AY.110.001339
ORF1ab/nsp31711A1711VgCtgTt11AY.1110.000183
ORF1ab/nsp31711A1711delGCT---11AY.1110.000183
ORF1ab/nsp31711A1711VgCtgTt11AY.120.000316
ORF1ab/nsp31711A1711delGCT---11AY.1200.000037
ORF1ab/nsp31711A1711VgCtgTt11AY.1210.000135
ORF1ab/nsp31711A1711AgcTgcC11AY.130.000161
ORF1ab/nsp31711A1711AgcTgcC11AY.140.000088
ORF1ab/nsp31711A1711delGCT---11AY.190.00114
ORF1ab/nsp31711A1711TGctAct11AY.230.00007
ORF1ab/nsp31711A1711TGctAct11AY.250.000006
ORF1ab/nsp31711A1711SGctTct11AY.290.000016
ORF1ab/nsp31711A1711delGCT---11AY.330.000067
ORF1ab/nsp31711A1711VgCtgTt11AY.340.000097
ORF1ab/nsp31711A1711SGctTct11AY.34.10.00051
ORF1ab/nsp31711A1711delGCT---11AY.360.000148
ORF1ab/nsp31711A1711TGctAct11AY.390.000025
ORF1ab/nsp31711A1711delGCT---11AY.430.000004
ORF1ab/nsp31711A1711TGctAct11AY.430.000004
ORF1ab/nsp31711A1711del1Gct-ct11AY.440.000006
ORF1ab/nsp31711A1711VgCtgTt11AY.46.20.000635
ORF1ab/nsp31711A1711VgCtgTt11AY.46.40.000165
ORF1ab/nsp31711A1711TGctAct11AY.470.000031
ORF1ab/nsp31711A1711delGCT---11AY.50.000021
ORF1ab/nsp31711A1711VgCtgTt11AY.5.40.000277
ORF1ab/nsp31711A1711VgCtgTt11AY.500.000799
ORF1ab/nsp31711A1711VgCtgTt11AY.520.000814
ORF1ab/nsp31711A1711delGCT---11AY.520.000814
ORF1ab/nsp31711A1711VgCtgTt11AY.550.000917
ORF1ab/nsp31711A1711delGCT---11AY.60.000041
ORF1ab/nsp31711A1711AgcTgcC11AY.610.000105
ORF1ab/nsp31711A1711VgCtgTt11AY.660.00107
ORF1ab/nsp31711A1711VgCtgTt11AY.680.000274
ORF1ab/nsp31711A1711SGctTct11AY.7.10.000113
ORF1ab/nsp31711A1711VgCtgTt11AY.7.10.000113
ORF1ab/nsp31711A1711VgCtgTt11AY.710.000475
ORF1ab/nsp31711A1711SGctTct11AY.710.000475
ORF1ab/nsp31711A1711VgCtgTt11AY.750.000056
ORF1ab/nsp31711A1711TGctAct11AY.75.10.00018
ORF1ab/nsp31711A1711DgCtgAt11AY.790.001211
ORF1ab/nsp31711A1711VgCtgTt11AY.80.000606
ORF1ab/nsp31711A1711delGCT---11AY.810.001992
ORF1ab/nsp31711A1711delGCT---11AY.840.000437
ORF1ab/nsp31711A1711VgCtgTt11AY.840.000437
ORF1ab/nsp31711A1711delGCT---11AY.90.000068
ORF1ab/nsp31711A1711TGctAct11AY.90.000068
ORF1ab/nsp31711A1711delGCT---11AY.9.20.000037
ORF1ab/nsp31711A1711VgCtgTt11AY.900.000684
ORF1ab/nsp31711A1711VgCtgTt11AY.960.002075
ORF1ab/nsp31711A1711TGctAct11AY.980.000079
ORF1ab/nsp31711A1711SGctTct11AY.980.000079
ORF1ab/nsp31711A1711VgCtgTt11AY.990.001049
ORF1ab/nsp31711A1711delGCT---11AY.990.001049
ORF1ab/nsp31711A1711delGCT---11AY.99.10.001553
ORF1ab/nsp31711A1711del1gCtg-t11B0.000128
ORF1ab/nsp31711A1711PGctCct11B.10.000009
ORF1ab/nsp31711A1711GgCtgGt11B.1.10.000018
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.1250.010204
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.1640.005155
ORF1ab/nsp31711A1711AgcTgcC11B.1.1.1710.003676
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.2530.002506
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.2730.006757
ORF1ab/nsp31711A1711TGctAct11B.1.1.3060.000438
ORF1ab/nsp31711A1711SGctTct11B.1.1.3060.000438
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.3160.000925
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.370.000193
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.3740.002375
ORF1ab/nsp31711A1711DgCtgAt11B.1.1.4090.002833
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.4330.001425
ORF1ab/nsp31711A1711TGctAct11B.1.1.440.00241
ORF1ab/nsp31711A1711delGCT---11B.1.1.460.004367
ORF1ab/nsp31711A1711SGctTct11B.1.1.4640.001473
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.5230.001563
ORF1ab/nsp31711A1711VgCtgTt11B.1.1.5260.003546
ORF1ab/nsp31711A1711TGctAct11B.1.1.610.008772
ORF1ab/nsp31711A1711DgCtgAt11B.1.1.70.000001
ORF1ab/nsp31711A1711PGctCct11B.1.1.70.000001
ORF1ab/nsp31711A1711SGctTct11B.1.110.30.000718
ORF1ab/nsp31711A1711VgCtgTt11B.1.160.120.00641
ORF1ab/nsp31711A1711VgCtgTt11B.1.160.160.000929
ORF1ab/nsp31711A1711SGctTct11B.1.160.290.004219
ORF1ab/nsp31711A1711AgcTgcC11B.1.1770.000013
ORF1ab/nsp31711A1711VgCtgTt11B.1.177.100.000878
ORF1ab/nsp31711A1711VgCtgTt11B.1.177.160.000664
ORF1ab/nsp31711A1711PGctCct11B.1.177.20.004545
ORF1ab/nsp31711A1711delGCT---11B.1.177.210.000076
ORF1ab/nsp31711A1711delGCT---11B.1.177.40.000211
ORF1ab/nsp31711A1711TGctAct11B.1.177.560.000668
ORF1ab/nsp31711A1711delGCT---11B.1.177.570.000281
ORF1ab/nsp31711A1711del1Gct-ct11B.1.177.60.000977
ORF1ab/nsp31711A1711delGCT---11B.1.177.60.000977
ORF1ab/nsp31711A1711VgCtgTt11B.1.177.610.043478
ORF1ab/nsp31711A1711VgCtgTt11B.1.177.70.000165
ORF1ab/nsp31711A1711delGCT---11B.1.177.830.001481
ORF1ab/nsp31711A1711VgCtgTt11B.1.177.860.000183
ORF1ab/nsp31711A1711SGctTct11B.1.20.000009
ORF1ab/nsp31711A1711VgCtgTt11B.1.220.001318
ORF1ab/nsp31711A1711TGctAct11B.1.2210.000071
ORF1ab/nsp31711A1711VgCtgTt11B.1.2230.002778
ORF1ab/nsp31711A1711VgCtgTt11B.1.2400.000216
ORF1ab/nsp31711A1711VgCtgTt11B.1.2430.00007
ORF1ab/nsp31711A1711VgCtgTt11B.1.2580.000067
ORF1ab/nsp31711A1711delGCT---11B.1.258.100.011364
ORF1ab/nsp31711A1711EgCTgAG11B.1.3320.003497
ORF1ab/nsp31711A1711TGctAct11B.1.3360.002439
ORF1ab/nsp31711A1711AgcTgcC11B.1.3510.00003
ORF1ab/nsp31711A1711delGCT---11B.1.360.000146
ORF1ab/nsp31711A1711VgCtgTt11B.1.360.000146
ORF1ab/nsp31711A1711del1Gct-ct11B.1.36.10.00114
ORF1ab/nsp31711A1711SGctTct11B.1.36.290.000517
ORF1ab/nsp31711A1711VgCtgTt11B.1.36.360.000602
ORF1ab/nsp31711A1711VgCtgTt11B.1.3670.000792
ORF1ab/nsp31711A1711SGctTct11B.1.3670.000792
ORF1ab/nsp31711A1711VgCtgTt11B.1.3770.004566
ORF1ab/nsp31711A1711delGCT---11B.1.4090.000781
ORF1ab/nsp31711A1711TGctAct11B.1.4270.00005
ORF1ab/nsp31711A1711TGctAct11B.1.4290.000024
ORF1ab/nsp31711A1711VgCtgTt11B.1.4330.003195
ORF1ab/nsp31711A1711SGctTct11B.1.5510.00129
ORF1ab/nsp31711A1711VgCtgTt11B.1.5820.000491
ORF1ab/nsp31711A1711SGctTct11B.1.5820.000491
ORF1ab/nsp31711A1711VgCtgTt11B.1.6090.000479
ORF1ab/nsp31711A1711TGctAct11B.1.6370.000073
ORF1ab/nsp31711A1711TGctAct11B.1.810.021277
ORF1ab/nsp31711A1711VgCtgTt11B.550.00295
ORF1ab/nsp31711A1711SGctTct11B.550.00295
ORF1ab/nsp31711A1711TGctAct11C.10.002392
ORF1ab/nsp31711A1711CGCtTGt11C.350.000774
ORF1ab/nsp31711A1711TGctAct11C.36.30.000567
ORF1ab/nsp31711A1711delGCT---11P.10.000016
ORF1ab/nsp31711A1711TGctAct11P.1.120.000484
ORF1ab/nsp31711A1711VgCtgTt11P.1.70.000319
ORF1ab/nsp31711A1711SGctTct11P.20.000187
ORF1ab/nsp31711A1711VgCtgTt11P.30.001595
ORF1ab/nsp31711A1711AgcTgcC11Q.10.000126
ORF1ab/nsp31711A1711TGctAct11Q.10.000126
ORF1ab/nsp31711A1711del1Gct-ct11R.10.00009