CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 171 & Codon = Agt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3171G171SG989SnonsynGgtAgt70270213230-3232

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3171G171SGgtAgt702702All0.000134
ORF1ab/nsp3171G171SGgtAgt175175B.1.1.70.000157
ORF1ab/nsp3171G171SGgtAgt102102U.20.894737
ORF1ab/nsp3171G171SGgtAgt8888B.1.1.2750.988764
ORF1ab/nsp3171G171SGgtAgt3434AY.1190.0012
ORF1ab/nsp3171G171SGgtAgt3030AY.9.20.001102
ORF1ab/nsp3171G171SGgtAgt2626AY.40.00004
ORF1ab/nsp3171G171SGgtAgt2626Q.10.003284
ORF1ab/nsp3171G171SGgtAgt2323AY.260.000651
ORF1ab/nsp3171G171SGgtAgt1515AY.430.000066
ORF1ab/nsp3171G171SGgtAgt1515B.1.20.000132
ORF1ab/nsp3171G171SGgtAgt1414AY.440.000085
ORF1ab/nsp3171G171SGgtAgt1414B.1.10.000254
ORF1ab/nsp3171G171SGgtAgt1313B.1.930.012138
ORF1ab/nsp3171G171SGgtAgt1212AY.1030.000075
ORF1ab/nsp3171G171SGgtAgt1212B.1.617.20.000045
ORF1ab/nsp3171G171SGgtAgt1111B.1.177.60.010742
ORF1ab/nsp3171G171SGgtAgt1010AY.250.00006
ORF1ab/nsp3171G171SGgtAgt88P.10.000126
ORF1ab/nsp3171G171SGgtAgt66B.10.000055
ORF1ab/nsp3171G171SGgtAgt55B.1.5260.000118
ORF1ab/nsp3171G171SGgtAgt33AY.1020.00008
ORF1ab/nsp3171G171SGgtAgt33AY.99.20.000276
ORF1ab/nsp3171G171SGgtAgt33B.1.1.630.001157
ORF1ab/nsp3171G171SGgtAgt33B.1.1.720.090909
ORF1ab/nsp3171G171SGgtAgt33B.1.177.630.008108
ORF1ab/nsp3171G171SGgtAgt33B.1.2580.0002
ORF1ab/nsp3171G171SGgtAgt22AY.1130.000285
ORF1ab/nsp3171G171SGgtAgt22AY.200.000078
ORF1ab/nsp3171G171SGgtAgt22AY.340.000194
ORF1ab/nsp3171G171SGgtAgt22AY.4.20.000043
ORF1ab/nsp3171G171SGgtAgt22B.1.1.1610.007067
ORF1ab/nsp3171G171SGgtAgt22B.1.1.280.000622
ORF1ab/nsp3171G171SGgtAgt22B.1.1.3060.000877
ORF1ab/nsp3171G171SGgtAgt22B.1.1.390.001019
ORF1ab/nsp3171G171SGgtAgt22B.1.1390.001466
ORF1ab/nsp3171G171SGgtAgt22B.1.221.30.001667
ORF1ab/nsp3171G171SGgtAgt22B.1.4990.002101
ORF1ab/nsp3171G171SGgtAgt22B.1.617.10.000258
ORF1ab/nsp3171G171SGgtAgt11AY.30.00001
ORF1ab/nsp3171G171SGgtAgt11AY.390.000025
ORF1ab/nsp3171G171SGgtAgt11AY.39.10.00004
ORF1ab/nsp3171G171SGgtAgt11AY.420.00004
ORF1ab/nsp3171G171SGgtAgt11AY.460.000104
ORF1ab/nsp3171G171SGgtAgt11AY.46.60.000072
ORF1ab/nsp3171G171SGgtAgt11AY.570.000656
ORF1ab/nsp3171G171SGgtAgt11AY.930.000273
ORF1ab/nsp3171G171SGgtAgt11B0.000128
ORF1ab/nsp3171G171SGgtAgt11B.1.1.10.000327
ORF1ab/nsp3171G171SGgtAgt11B.1.1.2300.009174
ORF1ab/nsp3171G171SGgtAgt11B.1.110.20.166667
ORF1ab/nsp3171G171SGgtAgt11B.1.1770.000013
ORF1ab/nsp3171G171SGgtAgt11B.1.177.170.000821
ORF1ab/nsp3171G171SGgtAgt11B.1.177.40.000211
ORF1ab/nsp3171G171SGgtAgt11B.1.177.600.000218
ORF1ab/nsp3171G171SGgtAgt11B.1.177.810.000189
ORF1ab/nsp3171G171SGgtAgt11B.1.3510.00003
ORF1ab/nsp3171G171SGgtAgt11B.1.3960.000706
ORF1ab/nsp3171G171SGgtAgt11B.1.5450.014493
ORF1ab/nsp3171G171SGgtAgt11P.1.120.000484