CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 171

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3171G171VG989VnonsyngGtgTt503350290.9992053230-3232
ORF1ab/nsp3171G171VG989VnonsyngGTgTA503320.0003973773230-3232
ORF1ab/nsp3171G171VG989VnonsyngGTgTC503320.0003973773230-3232
ORF1ab/nsp3171G171SG989SnonsynGgtAgt70270213230-3232
ORF1ab/nsp3171G171DG989DnonsyngGtgAt56856813230-3232
ORF1ab/nsp3171G171GG989GsynggTggC2772650.9566793230-3232
ORF1ab/nsp3171G171GG989GsynggTggA27770.02527083230-3232
ORF1ab/nsp3171G171GG989GsynggTggG27750.01805053230-3232
ORF1ab/nsp3171G171CG989CnonsynGgtTgt27327313230-3232
ORF1ab/nsp3171G171delG989deldelGGT---919113230-3232
ORF1ab/nsp3171G171RG989RnonsynGgtCgt363613230-3232
ORF1ab/nsp3171G171AG989AnonsyngGtgCt8813230-3232
ORF1ab/nsp3171G171KG989KnonsynGGTAAA6613230-3232
ORF1ab/nsp3171G171del1G989del1delGgt-gt430.753230-3232
ORF1ab/nsp3171G171del1G989del1delGGt-At410.253230-3232
ORF1ab/nsp3171G171NG989NnonsynGGtAAt1113230-3232
ORF1ab/nsp3171G171FG989FnonsynGGtTTt1113230-3232
ORF1ab/nsp3171G171IG989InonsynGGtATt1113230-3232

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3171G171VgGtgTt50295033All0.000962
ORF1ab/nsp3171G171VgGTgTA25033All0
ORF1ab/nsp3171G171VgGTgTC25033All0
ORF1ab/nsp3171G171VgGtgTt23272327B.1.5170.993595
ORF1ab/nsp3171G171SGgtAgt702702All0.000134
ORF1ab/nsp3171G171DgGtgAt568568All0.000109
ORF1ab/nsp3171G171VgGtgTt360360AY.40.00056
ORF1ab/nsp3171G171VgGtgTt340342B.1.1.70.000304
ORF1ab/nsp3171G171VgGTgTA2342B.1.1.70.000002
ORF1ab/nsp3171G171GggTggC265277All0.000051
ORF1ab/nsp3171G171GggTggA7277All0.000001
ORF1ab/nsp3171G171GggTggG5277All0.000001
ORF1ab/nsp3171G171CGgtTgt273273All0.000052
ORF1ab/nsp3171G171VgGtgTt255255AY.650.135928
ORF1ab/nsp3171G171VgGtgTt196196B.1.617.20.000738
ORF1ab/nsp3171G171VgGtgTt190190B.1.517.11
ORF1ab/nsp3171G171SGgtAgt175175B.1.1.70.000157
ORF1ab/nsp3171G171DgGtgAt174174B.1.20.001532
ORF1ab/nsp3171G171VgGtgTt172172B.1.20.001515
ORF1ab/nsp3171G171VgGtgTt144144B.1.3750.118033
ORF1ab/nsp3171G171VgGtgTt135135B.10.001237
ORF1ab/nsp3171G171VgGtgTt123123AY.1200.004573
ORF1ab/nsp3171G171SGgtAgt102102U.20.894737
ORF1ab/nsp3171G171delGGT---9191All0.000017
ORF1ab/nsp3171G171SGgtAgt8888B.1.1.2750.988764
ORF1ab/nsp3171G171GggTggC7374B.1.1.70.000065
ORF1ab/nsp3171G171GggTggA174B.1.1.70.000001
ORF1ab/nsp3171G171VgGtgTt6969AY.440.00042
ORF1ab/nsp3171G171VgGtgTt6565AY.430.000288
ORF1ab/nsp3171G171VgGtgTt6262AY.710.029454
ORF1ab/nsp3171G171CGgtTgt4949B.1.1.3050.189189
ORF1ab/nsp3171G171DgGtgAt3737AY.40.000058
ORF1ab/nsp3171G171DgGtgAt3737B.1.1.70.000033
ORF1ab/nsp3171G171RGgtCgt3636All0.000007
ORF1ab/nsp3171G171VgGtgTt3535B.1.10.000635
ORF1ab/nsp3171G171SGgtAgt3434AY.1190.0012
ORF1ab/nsp3171G171VgGtgTt3232B.1.1.5190.001271
ORF1ab/nsp3171G171CGgtTgt3131B.1.3510.000922
ORF1ab/nsp3171G171SGgtAgt3030AY.9.20.001102
ORF1ab/nsp3171G171VgGtgTt2929AY.30.000288
ORF1ab/nsp3171G171DgGtgAt2828AY.1030.000174
ORF1ab/nsp3171G171GggTggC2828AY.30.000278
ORF1ab/nsp3171G171DgGtgAt2828B.1.617.20.000105
ORF1ab/nsp3171G171CGgtTgt2727AF.11
ORF1ab/nsp3171G171DgGtgAt2727P.10.000425
ORF1ab/nsp3171G171VgGtgTt2626A.10.007328
ORF1ab/nsp3171G171SGgtAgt2626AY.40.00004
ORF1ab/nsp3171G171SGgtAgt2626Q.10.003284
ORF1ab/nsp3171G171DgGtgAt2525AY.39.10.00099
ORF1ab/nsp3171G171VgGtgTt2525P.10.000394
ORF1ab/nsp3171G171DgGtgAt2424AY.430.000106
ORF1ab/nsp3171G171SGgtAgt2323AY.260.000651
ORF1ab/nsp3171G171GggTggC2223AY.40.000034
ORF1ab/nsp3171G171GggTggA123AY.40.000002
ORF1ab/nsp3171G171CGgtTgt2323AY.440.00014
ORF1ab/nsp3171G171GggTggC2121AY.430.000093
ORF1ab/nsp3171G171GggTggC1921B.1.617.20.000072
ORF1ab/nsp3171G171GggTggG221B.1.617.20.000008
ORF1ab/nsp3171G171VgGtgTt2020AY.390.000494
ORF1ab/nsp3171G171VgGtgTt1919AY.1210.002571
ORF1ab/nsp3171G171DgGtgAt1919B.1.5260.000447
ORF1ab/nsp3171G171VgGtgTt1818B.1.1600.000561
ORF1ab/nsp3171G171VgGtgTt1818B.1.360.002626
ORF1ab/nsp3171G171CGgtTgt1616AY.430.000071
ORF1ab/nsp3171G171GggTggC1616AY.840.006999
ORF1ab/nsp3171G171SGgtAgt1515AY.430.000066
ORF1ab/nsp3171G171DgGtgAt1515AY.440.000091
ORF1ab/nsp3171G171SGgtAgt1515B.1.20.000132
ORF1ab/nsp3171G171CGgtTgt1515B.1.617.20.000056
ORF1ab/nsp3171G171GggTggC1414AY.1030.000087
ORF1ab/nsp3171G171SGgtAgt1414AY.440.000085
ORF1ab/nsp3171G171SGgtAgt1414B.1.10.000254
ORF1ab/nsp3171G171VgGtgTt1313AY.250.000078
ORF1ab/nsp3171G171CGgtTgt1313B.1.1.70.000012
ORF1ab/nsp3171G171SGgtAgt1313B.1.930.012138
ORF1ab/nsp3171G171SGgtAgt1212AY.1030.000075
ORF1ab/nsp3171G171VgGtgTt1212AY.200.000466
ORF1ab/nsp3171G171CGgtTgt1212AY.40.000019
ORF1ab/nsp3171G171GggTggC1212AY.9.20.000441
ORF1ab/nsp3171G171SGgtAgt1212B.1.617.20.000045
ORF1ab/nsp3171G171DgGtgAt1111AY.1190.000388
ORF1ab/nsp3171G171VgGtgTt1111AY.320.005857
ORF1ab/nsp3171G171VgGtgTt1111AY.700.002294
ORF1ab/nsp3171G171CGgtTgt1111B.1.10.0002
ORF1ab/nsp3171G171delGGT---1111B.1.1.70.00001
ORF1ab/nsp3171G171SGgtAgt1111B.1.177.60.010742
ORF1ab/nsp3171G171DgGtgAt1111B.1.4970.003462
ORF1ab/nsp3171G171delGGT---1111U.20.096491
ORF1ab/nsp3171G171SGgtAgt1010AY.250.00006
ORF1ab/nsp3171G171VgGtgTt1010B.1.177.850.054348
ORF1ab/nsp3171G171DgGtgAt99AY.30.00009
ORF1ab/nsp3171G171DgGtgAt99AY.3.10.000767
ORF1ab/nsp3171G171VgGtgTt99B.1.1770.000119
ORF1ab/nsp3171G171AgGtgCt88All0.000002
ORF1ab/nsp3171G171DgGtgAt88AY.250.000048
ORF1ab/nsp3171G171VgGtgTt88B.1.2430.000557
ORF1ab/nsp3171G171DgGtgAt88B.1.2580.000532
ORF1ab/nsp3171G171SGgtAgt88P.10.000126
ORF1ab/nsp3171G171DgGtgAt77AY.980.000553
ORF1ab/nsp3171G171CGgtTgt77B.1.1770.000092
ORF1ab/nsp3171G171VgGtgTt77B.1.5260.000165
ORF1ab/nsp3171G171DgGtgAt77B.1.619.10.00449
ORF1ab/nsp3171G171VgGtgTt77D.20.000525
ORF1ab/nsp3171G171KGGTAAA66All0.000001
ORF1ab/nsp3171G171VgGtgTt66AY.1020.000159
ORF1ab/nsp3171G171VgGtgTt66AY.1030.000037
ORF1ab/nsp3171G171VgGtgTt66AY.130.000966
ORF1ab/nsp3171G171DgGtgAt66AY.200.000233
ORF1ab/nsp3171G171CGgtTgt66AY.250.000036
ORF1ab/nsp3171G171CGgtTgt66AY.30.00006
ORF1ab/nsp3171G171CGgtTgt66AY.39.10.000238
ORF1ab/nsp3171G171VgGtgTt66AY.4.50.000645
ORF1ab/nsp3171G171GggTggC66AY.440.000037
ORF1ab/nsp3171G171GggTggC66AY.920.001724
ORF1ab/nsp3171G171DgGtgAt66B.10.000055
ORF1ab/nsp3171G171delGGT---66B.10.000055
ORF1ab/nsp3171G171SGgtAgt66B.10.000055
ORF1ab/nsp3171G171RGgtCgt66B.1.2430.000418
ORF1ab/nsp3171G171DgGtgAt66B.1.3130.039474
ORF1ab/nsp3171G171GggTggC66B.1.4270.000303
ORF1ab/nsp3171G171GggTggC66B.1.4290.000141
ORF1ab/nsp3171G171VgGtgTt66B.1.5460.022222
ORF1ab/nsp3171G171DgGtgAt66C.370.000696
ORF1ab/nsp3171G171delGGT---55AY.1000.00023
ORF1ab/nsp3171G171VgGtgTt55AY.290.000079
ORF1ab/nsp3171G171VgGtgTt55AY.450.000608
ORF1ab/nsp3171G171VgGtgTt55AY.460.00052
ORF1ab/nsp3171G171VgGtgTt55AY.470.000156
ORF1ab/nsp3171G171VgGtgTt55AY.50.000103
ORF1ab/nsp3171G171VgGtgTt55AY.610.000524
ORF1ab/nsp3171G171VgGtgTt55AY.75.10.000902
ORF1ab/nsp3171G171GggTggA25B.10.000018
ORF1ab/nsp3171G171GggTggG25B.10.000018
ORF1ab/nsp3171G171GggTggC15B.10.000009
ORF1ab/nsp3171G171KGGTAAA55B.1.1.70.000004
ORF1ab/nsp3171G171VgGtgTt55B.1.4090.003906
ORF1ab/nsp3171G171SGgtAgt55B.1.5260.000118
ORF1ab/nsp3171G171RGgtCgt55B.1.617.20.000019
ORF1ab/nsp3171G171VgGtgTt55B.1.6370.000365
ORF1ab/nsp3171G171VgGtgTt55P.1.140.000239
ORF1ab/nsp3171G171VgGtgTt55P.20.000933
ORF1ab/nsp3171G171del1Ggt-gt34All0.000001
ORF1ab/nsp3171G171del1GGt-At14All0
ORF1ab/nsp3171G171VgGtgTt44AY.330.000267
ORF1ab/nsp3171G171VgGtgTt44AY.370.001264
ORF1ab/nsp3171G171AgGtgCt44AY.40.000006
ORF1ab/nsp3171G171delGGT---44AY.40.000006
ORF1ab/nsp3171G171delGGT---44AY.440.000024
ORF1ab/nsp3171G171VgGtgTt44AY.46.50.000794
ORF1ab/nsp3171G171RGgtCgt44AY.5.40.001107
ORF1ab/nsp3171G171VgGtgTt44AY.690.000747
ORF1ab/nsp3171G171VgGtgTt44AY.790.004843
ORF1ab/nsp3171G171VgGtgTt44AY.900.002738
ORF1ab/nsp3171G171DgGtgAt44B.1.177.810.000757
ORF1ab/nsp3171G171VgGtgTt44B.1.2580.000266
ORF1ab/nsp3171G171GggTggC44B.1.258.170.000416
ORF1ab/nsp3171G171CGgtTgt44B.1.5260.000094
ORF1ab/nsp3171G171VgGtgTt44B.1.5960.000349
ORF1ab/nsp3171G171delGGT---33AY.1020.00008
ORF1ab/nsp3171G171RGgtCgt33AY.1020.00008
ORF1ab/nsp3171G171SGgtAgt33AY.1020.00008
ORF1ab/nsp3171G171CGgtTgt33AY.1030.000019
ORF1ab/nsp3171G171DgGtgAt33AY.1200.000112
ORF1ab/nsp3171G171GggTggC33AY.260.000085
ORF1ab/nsp3171G171VgGtgTt33AY.270.000194
ORF1ab/nsp3171G171DgGtgAt33AY.290.000047
ORF1ab/nsp3171G171RGgtCgt33AY.340.000291
ORF1ab/nsp3171G171VgGtgTt33AY.4.20.000065
ORF1ab/nsp3171G171VgGtgTt33AY.750.000168
ORF1ab/nsp3171G171delGGT---33AY.75.10.000541
ORF1ab/nsp3171G171VgGtgTt33AY.90.000203
ORF1ab/nsp3171G171SGgtAgt33AY.99.20.000276
ORF1ab/nsp3171G171delGGT---33B.1.1.330.001263
ORF1ab/nsp3171G171VgGtgTt33B.1.1.3330.003229
ORF1ab/nsp3171G171VgGtgTt33B.1.1.3690.001339
ORF1ab/nsp3171G171VgGtgTt33B.1.1.4340.001046
ORF1ab/nsp3171G171SGgtAgt33B.1.1.630.001157
ORF1ab/nsp3171G171SGgtAgt33B.1.1.720.090909
ORF1ab/nsp3171G171VgGtgTt33B.1.1490.010274
ORF1ab/nsp3171G171CGgtTgt33B.1.1600.000094
ORF1ab/nsp3171G171DgGtgAt33B.1.1770.00004
ORF1ab/nsp3171G171SGgtAgt33B.1.177.630.008108
ORF1ab/nsp3171G171VgGtgTt33B.1.177.810.000568
ORF1ab/nsp3171G171CGgtTgt33B.1.20.000026
ORF1ab/nsp3171G171VgGtgTt33B.1.2210.000213
ORF1ab/nsp3171G171GggTggA33B.1.2430.000209
ORF1ab/nsp3171G171SGgtAgt33B.1.2580.0002
ORF1ab/nsp3171G171GggTggC33B.1.3490.002144
ORF1ab/nsp3171G171VgGtgTt33B.1.3510.000089
ORF1ab/nsp3171G171DgGtgAt33B.1.3560.005181
ORF1ab/nsp3171G171DgGtgAt33B.1.36.80.003
ORF1ab/nsp3171G171VgGtgTt33B.1.4270.000151
ORF1ab/nsp3171G171VgGtgTt33B.1.4730.057692
ORF1ab/nsp3171G171VgGtgTt33B.1.5950.000783
ORF1ab/nsp3171G171VgGtgTt33B.1.617.10.000387
ORF1ab/nsp3171G171VgGtgTt33B.1.6210.000266
ORF1ab/nsp3171G171delGGT---33B.580.030612
ORF1ab/nsp3171G171VgGtgTt33P.1.130.002695
ORF1ab/nsp3171G171DgGtgAt220.111111
ORF1ab/nsp3171G171VgGtgTt22A0.000774
ORF1ab/nsp3171G171VgGtgTt22AY.100.00106
ORF1ab/nsp3171G171DgGtgAt22AY.1020.000053
ORF1ab/nsp3171G171delGGT---22AY.1030.000012
ORF1ab/nsp3171G171SGgtAgt22AY.1130.000285
ORF1ab/nsp3171G171CGgtTgt22AY.1130.000285
ORF1ab/nsp3171G171delGGT---22AY.120.000632
ORF1ab/nsp3171G171VgGtgTt22AY.160.000759
ORF1ab/nsp3171G171CGgtTgt22AY.200.000078
ORF1ab/nsp3171G171delGGT---22AY.200.000078
ORF1ab/nsp3171G171SGgtAgt22AY.200.000078
ORF1ab/nsp3171G171VgGtgTt22AY.230.000139
ORF1ab/nsp3171G171VgGtgTt22AY.240.000862
ORF1ab/nsp3171G171DgGtgAt22AY.260.000057
ORF1ab/nsp3171G171DgGtgAt22AY.330.000134
ORF1ab/nsp3171G171SGgtAgt22AY.340.000194
ORF1ab/nsp3171G171VgGtgTt22AY.340.000194
ORF1ab/nsp3171G171SGgtAgt22AY.4.20.000043
ORF1ab/nsp3171G171VgGtgTt22AY.420.00008
ORF1ab/nsp3171G171RGgtCgt22AY.470.000062
ORF1ab/nsp3171G171CGgtTgt22AY.50.000041
ORF1ab/nsp3171G171VgGtgTt22AY.60.000082
ORF1ab/nsp3171G171VgGtgTt22AY.600.001876
ORF1ab/nsp3171G171delGGT---22AY.710.00095
ORF1ab/nsp3171G171VgGtgTt22AY.9.10.000167
ORF1ab/nsp3171G171VgGtgTt22AY.9.20.000073
ORF1ab/nsp3171G171CGgtTgt22B.10.000018
ORF1ab/nsp3171G171delGGT---22B.1.10.000036
ORF1ab/nsp3171G171DgGtgAt22B.1.1.1210.004854
ORF1ab/nsp3171G171SGgtAgt22B.1.1.1610.007067
ORF1ab/nsp3171G171VgGtgTt22B.1.1.1860.006873
ORF1ab/nsp3171G171VgGtgTt22B.1.1.2220.000408
ORF1ab/nsp3171G171VgGtgTt22B.1.1.2690.002706
ORF1ab/nsp3171G171SGgtAgt22B.1.1.280.000622
ORF1ab/nsp3171G171SGgtAgt22B.1.1.3060.000877
ORF1ab/nsp3171G171DgGtgAt22B.1.1.330.000842
ORF1ab/nsp3171G171VgGtgTt22B.1.1.330.000842
ORF1ab/nsp3171G171delGGT---22B.1.1.3480.001592
ORF1ab/nsp3171G171SGgtAgt22B.1.1.390.001019
ORF1ab/nsp3171G171GggTggC22B.1.1.4160.00181
ORF1ab/nsp3171G171RGgtCgt22B.1.1.70.000002
ORF1ab/nsp3171G171SGgtAgt22B.1.1390.001466
ORF1ab/nsp3171G171GggTggC22B.1.1770.000026
ORF1ab/nsp3171G171VgGtgTt22B.1.2100.004264
ORF1ab/nsp3171G171SGgtAgt22B.1.221.30.001667
ORF1ab/nsp3171G171VgGtgTt22B.1.243.20.028986
ORF1ab/nsp3171G171CGgtTgt22B.1.2840.026316
ORF1ab/nsp3171G171delGGT---22B.1.3370.011173
ORF1ab/nsp3171G171GggTggC22B.1.3510.000059
ORF1ab/nsp3171G171VgGtgTt22B.1.3620.003082
ORF1ab/nsp3171G171VgGtgTt22B.1.3780.013699
ORF1ab/nsp3171G171VgGtgTt22B.1.4000.000858
ORF1ab/nsp3171G171SGgtAgt22B.1.4990.002101
ORF1ab/nsp3171G171VgGtgTt22B.1.5580.009132
ORF1ab/nsp3171G171VgGtgTt22B.1.5810.018868
ORF1ab/nsp3171G171DgGtgAt22B.1.5960.000174
ORF1ab/nsp3171G171SGgtAgt22B.1.617.10.000258
ORF1ab/nsp3171G171CGgtTgt22B.1.617.10.000258
ORF1ab/nsp3171G171VgGtgTt12B.290.003509
ORF1ab/nsp3171G171VgGTgTC12B.290.003509
ORF1ab/nsp3171G171VgGTgTC12B.400.000364
ORF1ab/nsp3171G171VgGtgTt12B.400.000364
ORF1ab/nsp3171G171VgGtgTt22C.370.000232
ORF1ab/nsp3171G171RGgtCgt22D.20.00015
ORF1ab/nsp3171G171CGgtTgt22D.20.00015
ORF1ab/nsp3171G171delGGT---22N.60.014184
ORF1ab/nsp3171G171VgGtgTt11A.210.00277
ORF1ab/nsp3171G171VgGtgTt11A.230.010526
ORF1ab/nsp3171G171DgGtgAt11A.270.001656
ORF1ab/nsp3171G171FGGtTTt11All0
ORF1ab/nsp3171G171NGGtAAt11All0
ORF1ab/nsp3171G171IGGtATt11All0
ORF1ab/nsp3171G171VgGtgTt11AY.1000.000046
ORF1ab/nsp3171G171DgGtgAt11AY.1000.000046
ORF1ab/nsp3171G171GggTggC11AY.1020.000027
ORF1ab/nsp3171G171CGgtTgt11AY.1020.000027
ORF1ab/nsp3171G171delGGT---11AY.1080.001103
ORF1ab/nsp3171G171RGgtCgt11AY.1100.000113
ORF1ab/nsp3171G171VgGtgTt11AY.1100.000113
ORF1ab/nsp3171G171DgGtgAt11AY.1130.000142
ORF1ab/nsp3171G171VgGtgTt11AY.1140.000231
ORF1ab/nsp3171G171GggTggC11AY.1160.000287
ORF1ab/nsp3171G171DgGtgAt11AY.116.10.000311
ORF1ab/nsp3171G171GggTggC11AY.1170.000085
ORF1ab/nsp3171G171delGGT---11AY.1180.000063
ORF1ab/nsp3171G171del1GGt-At11AY.1190.000035
ORF1ab/nsp3171G171CGgtTgt11AY.1190.000035
ORF1ab/nsp3171G171VgGtgTt11AY.1190.000035
ORF1ab/nsp3171G171DgGtgAt11AY.120.000316
ORF1ab/nsp3171G171delGGT---11AY.1200.000037
ORF1ab/nsp3171G171RGgtCgt11AY.1200.000037
ORF1ab/nsp3171G171VgGtgTt11AY.120.10.000321
ORF1ab/nsp3171G171CGgtTgt11AY.1210.000135
ORF1ab/nsp3171G171GggTggC11AY.1210.000135
ORF1ab/nsp3171G171VgGtgTt11AY.140.000088
ORF1ab/nsp3171G171VgGtgTt11AY.16.10.00047
ORF1ab/nsp3171G171VgGtgTt11AY.190.00114
ORF1ab/nsp3171G171GggTggG11AY.200.000039
ORF1ab/nsp3171G171GggTggC11AY.230.00007
ORF1ab/nsp3171G171del1Ggt-gt11AY.250.000006
ORF1ab/nsp3171G171GggTggC11AY.29.10.000221
ORF1ab/nsp3171G171DgGtgAt11AY.29.10.000221
ORF1ab/nsp3171G171SGgtAgt11AY.30.00001
ORF1ab/nsp3171G171VgGtgTt11AY.3.10.000085
ORF1ab/nsp3171G171DgGtgAt11AY.300.000396
ORF1ab/nsp3171G171CGgtTgt11AY.34.10.00051
ORF1ab/nsp3171G171CGgtTgt11AY.390.000025
ORF1ab/nsp3171G171RGgtCgt11AY.390.000025
ORF1ab/nsp3171G171SGgtAgt11AY.390.000025
ORF1ab/nsp3171G171DgGtgAt11AY.390.000025
ORF1ab/nsp3171G171SGgtAgt11AY.39.10.00004
ORF1ab/nsp3171G171FGGtTTt11AY.40.000002
ORF1ab/nsp3171G171DgGtgAt11AY.4.20.000022
ORF1ab/nsp3171G171delGGT---11AY.4.20.000022
ORF1ab/nsp3171G171VgGtgTt11AY.4.2.10.000149
ORF1ab/nsp3171G171VgGtgTt11AY.4.40.000409
ORF1ab/nsp3171G171DgGtgAt11AY.4.50.000107
ORF1ab/nsp3171G171VgGtgTt11AY.410.000294
ORF1ab/nsp3171G171SGgtAgt11AY.420.00004
ORF1ab/nsp3171G171GggTggC11AY.420.00004
ORF1ab/nsp3171G171CGgtTgt11AY.420.00004
ORF1ab/nsp3171G171RGgtCgt11AY.430.000004
ORF1ab/nsp3171G171RGgtCgt11AY.440.000006
ORF1ab/nsp3171G171delGGT---11AY.460.000104
ORF1ab/nsp3171G171CGgtTgt11AY.460.000104
ORF1ab/nsp3171G171SGgtAgt11AY.460.000104
ORF1ab/nsp3171G171VgGtgTt11AY.46.10.001027
ORF1ab/nsp3171G171VgGtgTt11AY.46.60.000072
ORF1ab/nsp3171G171SGgtAgt11AY.46.60.000072
ORF1ab/nsp3171G171DgGtgAt11AY.50.000021
ORF1ab/nsp3171G171delGGT---11AY.50.000021
ORF1ab/nsp3171G171VgGtgTt11AY.5.30.000337
ORF1ab/nsp3171G171VgGtgTt11AY.5.40.000277
ORF1ab/nsp3171G171VgGtgTt11AY.530.000288
ORF1ab/nsp3171G171SGgtAgt11AY.570.000656
ORF1ab/nsp3171G171VgGtgTt11AY.590.00053
ORF1ab/nsp3171G171delGGT---11AY.610.000105
ORF1ab/nsp3171G171GggTggC11AY.630.000387
ORF1ab/nsp3171G171GggTggC11AY.70.000196
ORF1ab/nsp3171G171VgGtgTt11AY.7.10.000113
ORF1ab/nsp3171G171DgGtgAt11AY.75.10.00018
ORF1ab/nsp3171G171VgGtgTt11AY.870.000833
ORF1ab/nsp3171G171VgGtgTt11AY.880.000884
ORF1ab/nsp3171G171VgGtgTt11AY.890.004902
ORF1ab/nsp3171G171delGGT---11AY.90.000068
ORF1ab/nsp3171G171RGgtCgt11AY.90.000068
ORF1ab/nsp3171G171RGgtCgt11AY.9.10.000084
ORF1ab/nsp3171G171DgGtgAt11AY.9.20.000037
ORF1ab/nsp3171G171CGgtTgt11AY.9.20.000037
ORF1ab/nsp3171G171VgGtgTt11AY.920.000287
ORF1ab/nsp3171G171SGgtAgt11AY.930.000273
ORF1ab/nsp3171G171VgGtgTt11AY.950.000761
ORF1ab/nsp3171G171delGGT---11AY.980.000079
ORF1ab/nsp3171G171VgGtgTt11AY.990.001049
ORF1ab/nsp3171G171VgGtgTt11AY.99.10.001553
ORF1ab/nsp3171G171DgGtgAt11B0.000128
ORF1ab/nsp3171G171CGgtTgt11B0.000128
ORF1ab/nsp3171G171SGgtAgt11B0.000128
ORF1ab/nsp3171G171RGgtCgt11B.10.000009
ORF1ab/nsp3171G171AgGtgCt11B.1.10.000018
ORF1ab/nsp3171G171DgGtgAt11B.1.10.000018
ORF1ab/nsp3171G171SGgtAgt11B.1.1.10.000327
ORF1ab/nsp3171G171VgGtgTt11B.1.1.1210.002427
ORF1ab/nsp3171G171VgGtgTt11B.1.1.1890.001513
ORF1ab/nsp3171G171VgGtgTt11B.1.1.2160.00089
ORF1ab/nsp3171G171SGgtAgt11B.1.1.2300.009174
ORF1ab/nsp3171G171delGGT---11B.1.1.2840.000107
ORF1ab/nsp3171G171VgGtgTt11B.1.1.2910.000742
ORF1ab/nsp3171G171VgGtgTt11B.1.1.2940.001266
ORF1ab/nsp3171G171VgGtgTt11B.1.1.3060.000438
ORF1ab/nsp3171G171DgGtgAt11B.1.1.3110.000358
ORF1ab/nsp3171G171VgGtgTt11B.1.1.3160.000925
ORF1ab/nsp3171G171VgGtgTt11B.1.1.3180.000302
ORF1ab/nsp3171G171CGgtTgt11B.1.1.3480.000796
ORF1ab/nsp3171G171CGgtTgt11B.1.1.3720.000689
ORF1ab/nsp3171G171DgGtgAt11B.1.1.3720.000689
ORF1ab/nsp3171G171DgGtgAt11B.1.1.390.00051
ORF1ab/nsp3171G171VgGtgTt11B.1.1.5180.006329
ORF1ab/nsp3171G171GggTggC11B.1.1.5190.00004
ORF1ab/nsp3171G171CGgtTgt11B.1.1.5190.00004
ORF1ab/nsp3171G171IGGtATt11B.1.1.70.000001
ORF1ab/nsp3171G171del1Ggt-gt11B.1.1.70.000001
ORF1ab/nsp3171G171AgGtgCt11B.1.1.70.000001
ORF1ab/nsp3171G171CGgtTgt11B.1.1.700.000341
ORF1ab/nsp3171G171SGgtAgt11B.1.110.20.166667
ORF1ab/nsp3171G171VgGtgTt11B.1.1570.002985
ORF1ab/nsp3171G171DgGtgAt11B.1.1600.000031
ORF1ab/nsp3171G171RGgtCgt11B.1.1600.000031
ORF1ab/nsp3171G171SGgtAgt11B.1.1770.000013
ORF1ab/nsp3171G171SGgtAgt11B.1.177.170.000821
ORF1ab/nsp3171G171delGGT---11B.1.177.210.000076
ORF1ab/nsp3171G171SGgtAgt11B.1.177.40.000211
ORF1ab/nsp3171G171DgGtgAt11B.1.177.400.005155
ORF1ab/nsp3171G171VgGtgTt11B.1.177.500.004695
ORF1ab/nsp3171G171VgGtgTt11B.1.177.530.002392
ORF1ab/nsp3171G171SGgtAgt11B.1.177.600.000218
ORF1ab/nsp3171G171VgGtgTt11B.1.177.750.001041
ORF1ab/nsp3171G171NGGtAAt11B.1.177.770.000726
ORF1ab/nsp3171G171delGGT---11B.1.177.80.000752
ORF1ab/nsp3171G171SGgtAgt11B.1.177.810.000189
ORF1ab/nsp3171G171delGGT---11B.1.177.830.001481
ORF1ab/nsp3171G171delGGT---11B.1.177.860.000183
ORF1ab/nsp3171G171del1Ggt-gt11B.1.20.000009
ORF1ab/nsp3171G171GggTggC11B.1.20.000009
ORF1ab/nsp3171G171delGGT---11B.1.2100.002132
ORF1ab/nsp3171G171DgGtgAt11B.1.2340.000132
ORF1ab/nsp3171G171CGgtTgt11B.1.258.170.000104
ORF1ab/nsp3171G171VgGtgTt11B.1.258.170.000104
ORF1ab/nsp3171G171VgGtgTt11B.1.2600.003344
ORF1ab/nsp3171G171VgGtgTt11B.1.3050.002151
ORF1ab/nsp3171G171VgGtgTt11B.1.3110.000275
ORF1ab/nsp3171G171VgGtgTt11B.1.3360.002439
ORF1ab/nsp3171G171VgGtgTt11B.1.3500.002933
ORF1ab/nsp3171G171SGgtAgt11B.1.3510.00003
ORF1ab/nsp3171G171delGGT---11B.1.3510.00003
ORF1ab/nsp3171G171CGgtTgt11B.1.36.10.00114
ORF1ab/nsp3171G171VgGtgTt11B.1.36.170.000494
ORF1ab/nsp3171G171VgGtgTt11B.1.36.220.001208
ORF1ab/nsp3171G171VgGtgTt11B.1.36.290.000517
ORF1ab/nsp3171G171VgGtgTt11B.1.36.80.001
ORF1ab/nsp3171G171GggTggC11B.1.3690.000285
ORF1ab/nsp3171G171VgGtgTt11B.1.3700.008
ORF1ab/nsp3171G171SGgtAgt11B.1.3960.000706
ORF1ab/nsp3171G171DgGtgAt11B.1.4040.001302
ORF1ab/nsp3171G171DgGtgAt11B.1.4230.010204
ORF1ab/nsp3171G171CGgtTgt11B.1.4270.00005
ORF1ab/nsp3171G171delGGT---11B.1.4290.000024
ORF1ab/nsp3171G171VgGtgTt11B.1.4290.000024
ORF1ab/nsp3171G171VgGtgTt11B.1.4360.001029
ORF1ab/nsp3171G171CGgtTgt11B.1.440.008333
ORF1ab/nsp3171G171GggTggC11B.1.4590.004082
ORF1ab/nsp3171G171VgGtgTt11B.1.466.20.000391
ORF1ab/nsp3171G171AgGtgCt11B.1.466.20.000391
ORF1ab/nsp3171G171VgGtgTt11B.1.5090.000866
ORF1ab/nsp3171G171SGgtAgt11B.1.5450.014493
ORF1ab/nsp3171G171GggTggC11B.1.5510.00129
ORF1ab/nsp3171G171VgGtgTt11B.1.5640.000426
ORF1ab/nsp3171G171GggTggC11B.1.5960.000087
ORF1ab/nsp3171G171VgGtgTt11B.1.6090.000479
ORF1ab/nsp3171G171DgGtgAt11B.1.617.10.000129
ORF1ab/nsp3171G171delGGT---11B.1.617.20.000004
ORF1ab/nsp3171G171KGGTAAA11B.1.617.20.000004
ORF1ab/nsp3171G171DgGtgAt11B.1.6200.000946
ORF1ab/nsp3171G171delGGT---11B.1.6210.000089
ORF1ab/nsp3171G171GggTggC11B.1.6210.000089
ORF1ab/nsp3171G171GggTggC11B.1.6280.000352
ORF1ab/nsp3171G171VgGtgTt11B.1.6290.013333
ORF1ab/nsp3171G171VgGtgTt11B.1.9.50.005682
ORF1ab/nsp3171G171GggTggC11B.290.003509
ORF1ab/nsp3171G171AgGtgCt11B.310.003731
ORF1ab/nsp3171G171delGGT---11B.340.013699
ORF1ab/nsp3171G171CGgtTgt11B.4.50.011905
ORF1ab/nsp3171G171GggTggC11B.400.000364
ORF1ab/nsp3171G171VgGtgTt11B.60.00091
ORF1ab/nsp3171G171VgGtgTt11C.160.00106
ORF1ab/nsp3171G171delGGT---11C.170.055556
ORF1ab/nsp3171G171CGgtTgt11C.37.10.002618
ORF1ab/nsp3171G171DgGtgAt11P.1.120.000484
ORF1ab/nsp3171G171VgGtgTt11P.1.120.000484
ORF1ab/nsp3171G171SGgtAgt11P.1.120.000484
ORF1ab/nsp3171G171CGgtTgt11P.1.130.000898
ORF1ab/nsp3171G171CGgtTgt11P.1.140.000048
ORF1ab/nsp3171G171VgGtgTt11P.1.170.000162
ORF1ab/nsp3171G171CGgtTgt11P.20.000187
ORF1ab/nsp3171G171DgGtgAt11P.20.000187
ORF1ab/nsp3171G171CGgtTgt11Q.10.000126
ORF1ab/nsp3171G171CGgtTgt11Q.30.000145
ORF1ab/nsp3171G171VgGtgTt11Q.80.000165
ORF1ab/nsp3171G171delGGT---11R.10.00009