CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1709 & Codon = ctT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31709L1709LL2527LsynctGctT34921340.03837347844-7846

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31709L1709LctGctT1343492All0.000026
ORF1ab/nsp31709L1709LctGctT18296B.1.617.20.000068
ORF1ab/nsp31709L1709LctGctT18286AY.1000.000828
ORF1ab/nsp31709L1709LctGctT36278B.1.1.70.000032
ORF1ab/nsp31709L1709LctGctT1108B.1.20.000009
ORF1ab/nsp31709L1709LctGctT471AY.40.000006
ORF1ab/nsp31709L1709LctGctT348B.10.000027
ORF1ab/nsp31709L1709LctGctT340AY.250.000018
ORF1ab/nsp31709L1709LctGctT140B.1.2210.000071
ORF1ab/nsp31709L1709LctGctT636B.1.10.000109
ORF1ab/nsp31709L1709LctGctT1011AY.1190.000353
ORF1ab/nsp31709L1709LctGctT210AY.540.000191
ORF1ab/nsp31709L1709LctGctT19AY.1020.000027
ORF1ab/nsp31709L1709LctGctT470.222222
ORF1ab/nsp31709L1709LctGctT66B.1.4480.015748
ORF1ab/nsp31709L1709LctGctT25AY.46.60.000144
ORF1ab/nsp31709L1709LctGctT14B.1.617.10.000129
ORF1ab/nsp31709L1709LctGctT13AY.1130.000142
ORF1ab/nsp31709L1709LctGctT13B.1.1.700.000341
ORF1ab/nsp31709L1709LctGctT12AY.98.10.000048
ORF1ab/nsp31709L1709LctGctT22B.1.258.170.000208
ORF1ab/nsp31709L1709LctGctT12B.1.2600.003344
ORF1ab/nsp31709L1709LctGctT12B.1.3110.000275
ORF1ab/nsp31709L1709LctGctT11A.50.001923
ORF1ab/nsp31709L1709LctGctT11AY.390.000025
ORF1ab/nsp31709L1709LctGctT11AY.660.00107
ORF1ab/nsp31709L1709LctGctT11B.1.1.5190.00004
ORF1ab/nsp31709L1709LctGctT11B.1.1570.002985
ORF1ab/nsp31709L1709LctGctT11B.1.160.300.002976
ORF1ab/nsp31709L1709LctGctT11B.1.177.150.000631
ORF1ab/nsp31709L1709LctGctT11B.1.177.230.003236
ORF1ab/nsp31709L1709LctGctT11B.1.2840.013158
ORF1ab/nsp31709L1709LctGctT11B.1.930.000934
ORF1ab/nsp31709L1709LctGctT11D.20.000075