CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1700 & Codon = cCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31700L1700PL2518PnonsyncTccCc525217817-7819

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31700L1700PcTccCc5252All0.00001
ORF1ab/nsp31700L1700PcTccCc88AY.20.002849
ORF1ab/nsp31700L1700PcTccCc66V.20.193548
ORF1ab/nsp31700L1700PcTccCc44AY.40.000006
ORF1ab/nsp31700L1700PcTccCc44B.1.1.70.000004
ORF1ab/nsp31700L1700PcTccCc44B.1.20.000035
ORF1ab/nsp31700L1700PcTccCc33B.10.000027
ORF1ab/nsp31700L1700PcTccCc33B.1.1770.00004
ORF1ab/nsp31700L1700PcTccCc33P.10.000047
ORF1ab/nsp31700L1700PcTccCc220.111111
ORF1ab/nsp31700L1700PcTccCc22AY.430.000009
ORF1ab/nsp31700L1700PcTccCc11A.10.000282
ORF1ab/nsp31700L1700PcTccCc11AY.1000.000046
ORF1ab/nsp31700L1700PcTccCc11AY.1020.000027
ORF1ab/nsp31700L1700PcTccCc11AY.260.000028
ORF1ab/nsp31700L1700PcTccCc11AY.30.00001
ORF1ab/nsp31700L1700PcTccCc11AY.9.20.000037
ORF1ab/nsp31700L1700PcTccCc11AY.99.20.000092
ORF1ab/nsp31700L1700PcTccCc11B.1.177.170.000821
ORF1ab/nsp31700L1700PcTccCc11B.1.2210.000071
ORF1ab/nsp31700L1700PcTccCc11B.1.230.006061
ORF1ab/nsp31700L1700PcTccCc11B.1.36.200.016949
ORF1ab/nsp31700L1700PcTccCc11B.1.617.20.000004
ORF1ab/nsp31700L1700PcTccCc11P.1.140.000048