CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1682 & Codon = tcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31682S1682SS2500SsyntcCtcT10510102170.9721227763-7765

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31682S1682StcCtcT1021710510All0.001954
ORF1ab/nsp31682S1682StcCtcT17641774B.1.1.70.001579
ORF1ab/nsp31682S1682StcCtcT11871187AY.440.007225
ORF1ab/nsp31682S1682StcCtcT585594AY.40.000911
ORF1ab/nsp31682S1682StcCtcT497499B.1.617.20.001871
ORF1ab/nsp31682S1682StcCtcT237399AY.250.001426
ORF1ab/nsp31682S1682StcCtcT352353AY.430.00156
ORF1ab/nsp31682S1682StcCtcT294294AY.1030.001825
ORF1ab/nsp31682S1682StcCtcT294294B.1.1.5190.011675
ORF1ab/nsp31682S1682StcCtcT282288B.10.002583
ORF1ab/nsp31682S1682StcCtcT272273B.1.20.002395
ORF1ab/nsp31682S1682StcCtcT228228B.1.1.500.154786
ORF1ab/nsp31682S1682StcCtcT202202P.70.882096
ORF1ab/nsp31682S1682StcCtcT162162B.1.9.40.993865
ORF1ab/nsp31682S1682StcCtcT158158B.1.90.975309
ORF1ab/nsp31682S1682StcCtcT157157B.1.9.50.892045
ORF1ab/nsp31682S1682StcCtcT156156B.1.5260.003667
ORF1ab/nsp31682S1682StcCtcT144144B.1.360.02101
ORF1ab/nsp31682S1682StcCtcT128129AY.90.008652
ORF1ab/nsp31682S1682StcCtcT120122P.10.00189
ORF1ab/nsp31682S1682StcCtcT90112B.1.1770.001185
ORF1ab/nsp31682S1682StcCtcT107107AY.950.081431
ORF1ab/nsp31682S1682StcCtcT8993B.1.10.001615
ORF1ab/nsp31682S1682StcCtcT9292AY.50.0019
ORF1ab/nsp31682S1682StcCtcT8789B.1.4290.002047
ORF1ab/nsp31682S1682StcCtcT8888AY.750.00493
ORF1ab/nsp31682S1682StcCtcT8787B.1.5750.026396
ORF1ab/nsp31682S1682StcCtcT6061AY.390.001483
ORF1ab/nsp31682S1682StcCtcT6060C.370.006964
ORF1ab/nsp31682S1682StcCtcT5758AY.30.000567
ORF1ab/nsp31682S1682StcCtcT5757AY.670.026462
ORF1ab/nsp31682S1682StcCtcT5454AY.330.003606
ORF1ab/nsp31682S1682StcCtcT5252AY.1000.002392
ORF1ab/nsp31682S1682StcCtcT449B.1.5960.000349
ORF1ab/nsp31682S1682StcCtcT4545B.1.428.30.576923
ORF1ab/nsp31682S1682StcCtcT4444AY.1020.001167
ORF1ab/nsp31682S1682StcCtcT4444AY.9.20.001616
ORF1ab/nsp31682S1682StcCtcT4343AY.46.60.003105
ORF1ab/nsp31682S1682StcCtcT4242B.1.351.20.012708
ORF1ab/nsp31682S1682StcCtcT4141C.1.20.174468
ORF1ab/nsp31682S1682StcCtcT3838AY.260.001076
ORF1ab/nsp31682S1682StcCtcT3838AY.99.20.003502
ORF1ab/nsp31682S1682StcCtcT3637AY.290.000568
ORF1ab/nsp31682S1682StcCtcT3636AY.1200.001338
ORF1ab/nsp31682S1682StcCtcT3636AY.450.004381
ORF1ab/nsp31682S1682StcCtcT3535B.1.6270.070707
ORF1ab/nsp31682S1682StcCtcT3131B.1.3510.000922
ORF1ab/nsp31682S1682StcCtcT3131B.1.466.20.012128
ORF1ab/nsp31682S1682StcCtcT3131B.1.9.11
ORF1ab/nsp31682S1682StcCtcT3131N.50.05477
ORF1ab/nsp31682S1682StcCtcT2626B.1.9.31
ORF1ab/nsp31682S1682StcCtcT2626Q.20.015951
ORF1ab/nsp31682S1682StcCtcT2525AY.46.50.00496
ORF1ab/nsp31682S1682StcCtcT2525AY.5.10.093985
ORF1ab/nsp31682S1682StcCtcT2525B.1.1.280.007781
ORF1ab/nsp31682S1682StcCtcT2525B.1.1.3690.011156
ORF1ab/nsp31682S1682StcCtcT2424B.1.221.30.02
ORF1ab/nsp31682S1682StcCtcT2323AY.4.20.000499
ORF1ab/nsp31682S1682StcCtcT2323B.1.2210.001634
ORF1ab/nsp31682S1682StcCtcT2222B.1.438.10.00236
ORF1ab/nsp31682S1682StcCtcT2121AY.200.000816
ORF1ab/nsp31682S1682StcCtcT2121B.1.258.170.002183
ORF1ab/nsp31682S1682StcCtcT2020B.1.4270.00101
ORF1ab/nsp31682S1682StcCtcT1919AY.1190.000671
ORF1ab/nsp31682S1682StcCtcT1919B.1.2320.01021
ORF1ab/nsp31682S1682StcCtcT1919B.1.5250.00215
ORF1ab/nsp31682S1682StcCtcT1818B.1.1.3890.109091
ORF1ab/nsp31682S1682StcCtcT1818B.1.177.40.003799
ORF1ab/nsp31682S1682StcCtcT418Q.30.00058
ORF1ab/nsp31682S1682StcCtcT1818R.10.00162
ORF1ab/nsp31682S1682StcCtcT1717AY.9.10.001423
ORF1ab/nsp31682S1682StcCtcT1717B.1.1.4340.005925
ORF1ab/nsp31682S1682StcCtcT1717B.1.1600.00053
ORF1ab/nsp31682S1682StcCtcT1717B.1.6370.001242
ORF1ab/nsp31682S1682StcCtcT1717P.20.003173
ORF1ab/nsp31682S1682StcCtcT1616AY.420.000644
ORF1ab/nsp31682S1682StcCtcT1616B.1.1.2140.000887
ORF1ab/nsp31682S1682StcCtcT1515B.1.177.860.002752
ORF1ab/nsp31682S1682StcCtcT1414AY.39.10.000555
ORF1ab/nsp31682S1682StcCtcT1414AY.540.001335
ORF1ab/nsp31682S1682StcCtcT1414B.1.2180.072165
ORF1ab/nsp31682S1682StcCtcT1414B.1.5650.011345
ORF1ab/nsp31682S1682StcCtcT1414P.1.140.000669
ORF1ab/nsp31682S1682StcCtcT1313AD.20.002847
ORF1ab/nsp31682S1682StcCtcT1313AY.470.000404
ORF1ab/nsp31682S1682StcCtcT1313B.1.5970.060185
ORF1ab/nsp31682S1682StcCtcT1313C.390.245283
ORF1ab/nsp31682S1682StcCtcT1212AY.1060.004019
ORF1ab/nsp31682S1682StcCtcT1212B.1.177.570.003372
ORF1ab/nsp31682S1682StcCtcT1212B.1.214.20.007194
ORF1ab/nsp31682S1682StcCtcT1212B.1.6210.001062
ORF1ab/nsp31682S1682StcCtcT1111B.1.1.1920.025404
ORF1ab/nsp31682S1682StcCtcT1111B.1.177.170.009031
ORF1ab/nsp31682S1682StcCtcT1010AY.1180.000626
ORF1ab/nsp31682S1682StcCtcT1010AY.46.40.001645
ORF1ab/nsp31682S1682StcCtcT1010B.1.2390.01221
ORF1ab/nsp31682S1682StcCtcT1010B.1.3110.002746
ORF1ab/nsp31682S1682StcCtcT1010B.1.9.21
ORF1ab/nsp31682S1682StcCtcT1010P.1.70.003193
ORF1ab/nsp31682S1682StcCtcT99AY.120.10.002889
ORF1ab/nsp31682S1682StcCtcT99AY.3.10.000767
ORF1ab/nsp31682S1682StcCtcT99AY.4.30.007576
ORF1ab/nsp31682S1682StcCtcT99B.1.2580.000599
ORF1ab/nsp31682S1682StcCtcT99B.1.5270.033333
ORF1ab/nsp31682S1682StcCtcT99Q.10.001137
ORF1ab/nsp31682S1682StcCtcT88AY.1210.001083
ORF1ab/nsp31682S1682StcCtcT88AY.560.012841
ORF1ab/nsp31682S1682StcCtcT88AY.980.000632
ORF1ab/nsp31682S1682StcCtcT88B.1.1.3180.002414
ORF1ab/nsp31682S1682StcCtcT88B.1.2430.000557
ORF1ab/nsp31682S1682StcCtcT88B.1.5630.135593
ORF1ab/nsp31682S1682StcCtcT88C.360.007286
ORF1ab/nsp31682S1682StcCtcT77AY.1170.000592
ORF1ab/nsp31682S1682StcCtcT77AY.350.001631
ORF1ab/nsp31682S1682StcCtcT77B.1.3690.001997
ORF1ab/nsp31682S1682StcCtcT77B.1.3960.00494
ORF1ab/nsp31682S1682StcCtcT77B.1.4090.005469
ORF1ab/nsp31682S1682StcCtcT77B.1.4970.002203
ORF1ab/nsp31682S1682StcCtcT66AY.1110.001099
ORF1ab/nsp31682S1682StcCtcT66AY.130.000966
ORF1ab/nsp31682S1682StcCtcT66AY.610.000629
ORF1ab/nsp31682S1682StcCtcT66B0.000767
ORF1ab/nsp31682S1682StcCtcT66B.1.1.1630.045802
ORF1ab/nsp31682S1682StcCtcT66B.1.1.1740.02027
ORF1ab/nsp31682S1682StcCtcT66B.1.1.4330.008547
ORF1ab/nsp31682S1682StcCtcT66B.1.1.5260.021277
ORF1ab/nsp31682S1682StcCtcT66B.1.130.014252
ORF1ab/nsp31682S1682StcCtcT66C.36.30.003403
ORF1ab/nsp31682S1682StcCtcT66C.36.3.10.016304
ORF1ab/nsp31682S1682StcCtcT66Q.80.000989
ORF1ab/nsp31682S1682StcCtcT55AY.230.000349
ORF1ab/nsp31682S1682StcCtcT55AY.5.40.001384
ORF1ab/nsp31682S1682StcCtcT55AY.710.002375
ORF1ab/nsp31682S1682StcCtcT55AY.780.007704
ORF1ab/nsp31682S1682StcCtcT55B.1.1.3170.002058
ORF1ab/nsp31682S1682StcCtcT55B.1.1.700.001705
ORF1ab/nsp31682S1682StcCtcT55B.1.2650.006353
ORF1ab/nsp31682S1682StcCtcT55B.1.5640.002129
ORF1ab/nsp31682S1682StcCtcT55C.300.008636
ORF1ab/nsp31682S1682StcCtcT55D.20.000375
ORF1ab/nsp31682S1682StcCtcT55P.1.120.00242
ORF1ab/nsp31682S1682StcCtcT44AE.80.001956
ORF1ab/nsp31682S1682StcCtcT44AY.1130.00057
ORF1ab/nsp31682S1682StcCtcT44AY.140.000352
ORF1ab/nsp31682S1682StcCtcT44AY.4.50.00043
ORF1ab/nsp31682S1682StcCtcT44AY.60.000165
ORF1ab/nsp31682S1682StcCtcT44AY.650.002132
ORF1ab/nsp31682S1682StcCtcT44AY.75.10.000721
ORF1ab/nsp31682S1682StcCtcT44AY.98.10.000194
ORF1ab/nsp31682S1682StcCtcT44B.1.1.4200.004024
ORF1ab/nsp31682S1682StcCtcT44B.1.351.50.002398
ORF1ab/nsp31682S1682StcCtcT44B.1.4250.011976
ORF1ab/nsp31682S1682StcCtcT44B.1.4430.018692
ORF1ab/nsp31682S1682StcCtcT44B.1.4700.005618
ORF1ab/nsp31682S1682StcCtcT44B.1.5610.001588
ORF1ab/nsp31682S1682StcCtcT44B.1.5870.00759
ORF1ab/nsp31682S1682StcCtcT44P.1.170.000647
ORF1ab/nsp31682S1682StcCtcT33A0.001161
ORF1ab/nsp31682S1682StcCtcT33A.210.00831
ORF1ab/nsp31682S1682StcCtcT33A.30.006289
ORF1ab/nsp31682S1682StcCtcT33AY.1050.001929
ORF1ab/nsp31682S1682StcCtcT33AY.1100.000338
ORF1ab/nsp31682S1682StcCtcT33AY.1140.000693
ORF1ab/nsp31682S1682StcCtcT33AY.120.000948
ORF1ab/nsp31682S1682StcCtcT33AY.20.001068
ORF1ab/nsp31682S1682StcCtcT33AY.240.001293
ORF1ab/nsp31682S1682StcCtcT33AY.270.000194
ORF1ab/nsp31682S1682StcCtcT33AY.300.001187
ORF1ab/nsp31682S1682StcCtcT33AY.5.30.001012
ORF1ab/nsp31682S1682StcCtcT33AY.7.10.000338
ORF1ab/nsp31682S1682StcCtcT13AY.700.000209
ORF1ab/nsp31682S1682StcCtcT33AY.770.003382
ORF1ab/nsp31682S1682StcCtcT33B.1.1.2770.002276
ORF1ab/nsp31682S1682StcCtcT33B.1.1.3060.001315
ORF1ab/nsp31682S1682StcCtcT33B.1.1110.003525
ORF1ab/nsp31682S1682StcCtcT33B.1.177.460.002755
ORF1ab/nsp31682S1682StcCtcT33B.1.177.70.000495
ORF1ab/nsp31682S1682StcCtcT33B.1.2810.065217
ORF1ab/nsp31682S1682StcCtcT33B.1.3460.003932
ORF1ab/nsp31682S1682StcCtcT33B.1.36.290.001552
ORF1ab/nsp31682S1682StcCtcT33B.1.4260.003027
ORF1ab/nsp31682S1682StcCtcT33B.1.6090.001438
ORF1ab/nsp31682S1682StcCtcT33B.1.617.10.000387
ORF1ab/nsp31682S1682StcCtcT33C.10.007177
ORF1ab/nsp31682S1682StcCtcT22A.2.50.000998
ORF1ab/nsp31682S1682StcCtcT22A.23.10.001408
ORF1ab/nsp31682S1682StcCtcT22AY.1160.000574
ORF1ab/nsp31682S1682StcCtcT12AY.320.000532
ORF1ab/nsp31682S1682StcCtcT22AY.380.000999
ORF1ab/nsp31682S1682StcCtcT22AY.580.001815
ORF1ab/nsp31682S1682StcCtcT22AY.620.000871
ORF1ab/nsp31682S1682StcCtcT22AY.680.000547
ORF1ab/nsp31682S1682StcCtcT22AY.740.000231
ORF1ab/nsp31682S1682StcCtcT22B.1.1.1410.004024
ORF1ab/nsp31682S1682StcCtcT22B.1.1.2070.002364
ORF1ab/nsp31682S1682StcCtcT22B.1.1.330.000842
ORF1ab/nsp31682S1682StcCtcT22B.1.1.3340.032787
ORF1ab/nsp31682S1682StcCtcT22B.1.1.3480.001592
ORF1ab/nsp31682S1682StcCtcT12B.1.1.4090.002833
ORF1ab/nsp31682S1682StcCtcT22B.1.1.5180.012658
ORF1ab/nsp31682S1682StcCtcT22B.1.1270.004396
ORF1ab/nsp31682S1682StcCtcT22B.1.177.350.001382
ORF1ab/nsp31682S1682StcCtcT22B.1.177.520.003515
ORF1ab/nsp31682S1682StcCtcT22B.1.177.690.002967
ORF1ab/nsp31682S1682StcCtcT22B.1.177.730.001133
ORF1ab/nsp31682S1682StcCtcT22B.1.1920.018519
ORF1ab/nsp31682S1682StcCtcT22B.1.2340.000264
ORF1ab/nsp31682S1682StcCtcT22B.1.2400.000431
ORF1ab/nsp31682S1682StcCtcT22B.1.2410.001623
ORF1ab/nsp31682S1682StcCtcT22B.1.3240.00321
ORF1ab/nsp31682S1682StcCtcT22B.1.3360.004878
ORF1ab/nsp31682S1682StcCtcT22B.1.3980.005952
ORF1ab/nsp31682S1682StcCtcT22B.1.4000.000858
ORF1ab/nsp31682S1682StcCtcT22B.1.415.10.015152
ORF1ab/nsp31682S1682StcCtcT22B.1.4220.001625
ORF1ab/nsp31682S1682StcCtcT22B.1.5330.019231
ORF1ab/nsp31682S1682StcCtcT22B.1.6230.001073
ORF1ab/nsp31682S1682StcCtcT22B.1.6280.000705
ORF1ab/nsp31682S1682StcCtcT22B.1.80.003945
ORF1ab/nsp31682S1682StcCtcT22B.400.000729
ORF1ab/nsp31682S1682StcCtcT22P.1.40.001953
ORF1ab/nsp31682S1682StcCtcT11A.10.000282
ORF1ab/nsp31682S1682StcCtcT11A.110.058824
ORF1ab/nsp31682S1682StcCtcT11A.2.20.001689
ORF1ab/nsp31682S1682StcCtcT11A.230.010526
ORF1ab/nsp31682S1682StcCtcT11AE.50.018519
ORF1ab/nsp31682S1682StcCtcT11AU.10.001266
ORF1ab/nsp31682S1682StcCtcT11AW.10.003049
ORF1ab/nsp31682S1682StcCtcT11AY.10.000396
ORF1ab/nsp31682S1682StcCtcT11AY.1010.00049
ORF1ab/nsp31682S1682StcCtcT11AY.1080.001103
ORF1ab/nsp31682S1682StcCtcT11AY.120.20.001285
ORF1ab/nsp31682S1682StcCtcT11AY.16.10.00047
ORF1ab/nsp31682S1682StcCtcT11AY.23.10.000417
ORF1ab/nsp31682S1682StcCtcT11AY.280.00189
ORF1ab/nsp31682S1682StcCtcT11AY.360.000148
ORF1ab/nsp31682S1682StcCtcT11AY.370.000316
ORF1ab/nsp31682S1682StcCtcT11AY.4.2.10.000149
ORF1ab/nsp31682S1682StcCtcT11AY.4.40.000409
ORF1ab/nsp31682S1682StcCtcT11AY.400.000964
ORF1ab/nsp31682S1682StcCtcT11AY.410.000294
ORF1ab/nsp31682S1682StcCtcT11AY.460.000104
ORF1ab/nsp31682S1682StcCtcT11AY.480.000465
ORF1ab/nsp31682S1682StcCtcT11AY.520.000814
ORF1ab/nsp31682S1682StcCtcT11AY.530.000288
ORF1ab/nsp31682S1682StcCtcT11AY.570.000656
ORF1ab/nsp31682S1682StcCtcT11AY.590.00053
ORF1ab/nsp31682S1682StcCtcT11AY.690.000187
ORF1ab/nsp31682S1682StcCtcT11AY.820.001357
ORF1ab/nsp31682S1682StcCtcT11AY.840.000437
ORF1ab/nsp31682S1682StcCtcT11AY.930.000273
ORF1ab/nsp31682S1682StcCtcT11AY.940.000443
ORF1ab/nsp31682S1682StcCtcT11AZ.20.000821
ORF1ab/nsp31682S1682StcCtcT11B.1.1.10.000327
ORF1ab/nsp31682S1682StcCtcT11B.1.1.1210.002427
ORF1ab/nsp31682S1682StcCtcT11B.1.1.1290.009174
ORF1ab/nsp31682S1682StcCtcT11B.1.1.1760.000439
ORF1ab/nsp31682S1682StcCtcT11B.1.1.1820.090909
ORF1ab/nsp31682S1682StcCtcT11B.1.1.1890.001513
ORF1ab/nsp31682S1682StcCtcT11B.1.1.1940.00495
ORF1ab/nsp31682S1682StcCtcT11B.1.1.1980.001468
ORF1ab/nsp31682S1682StcCtcT11B.1.1.2220.000204
ORF1ab/nsp31682S1682StcCtcT11B.1.1.2320.001815
ORF1ab/nsp31682S1682StcCtcT11B.1.1.3020.002075
ORF1ab/nsp31682S1682StcCtcT11B.1.1.3040.002809
ORF1ab/nsp31682S1682StcCtcT11B.1.1.3360.016667
ORF1ab/nsp31682S1682StcCtcT11B.1.1.3540.004386
ORF1ab/nsp31682S1682StcCtcT11B.1.1.3620.005618
ORF1ab/nsp31682S1682StcCtcT11B.1.1.370.000193
ORF1ab/nsp31682S1682StcCtcT11B.1.1.3760.005952
ORF1ab/nsp31682S1682StcCtcT11B.1.1.3880.045455
ORF1ab/nsp31682S1682StcCtcT11B.1.1.390.00051
ORF1ab/nsp31682S1682StcCtcT11B.1.1.4000.05
ORF1ab/nsp31682S1682StcCtcT11B.1.1.4480.002033
ORF1ab/nsp31682S1682StcCtcT11B.1.1.4620.008621
ORF1ab/nsp31682S1682StcCtcT11B.1.1.4860.001577
ORF1ab/nsp31682S1682StcCtcT11B.1.1280.000635
ORF1ab/nsp31682S1682StcCtcT11B.1.1310.008772
ORF1ab/nsp31682S1682StcCtcT11B.1.1430.021277
ORF1ab/nsp31682S1682StcCtcT11B.1.1470.000756
ORF1ab/nsp31682S1682StcCtcT11B.1.160.290.004219
ORF1ab/nsp31682S1682StcCtcT11B.1.177.100.000878
ORF1ab/nsp31682S1682StcCtcT11B.1.177.120.000152
ORF1ab/nsp31682S1682StcCtcT11B.1.177.150.000631
ORF1ab/nsp31682S1682StcCtcT11B.1.177.190.001431
ORF1ab/nsp31682S1682StcCtcT11B.1.177.20.004545
ORF1ab/nsp31682S1682StcCtcT11B.1.177.380.010417
ORF1ab/nsp31682S1682StcCtcT11B.1.177.440.000519
ORF1ab/nsp31682S1682StcCtcT11B.1.177.680.015152
ORF1ab/nsp31682S1682StcCtcT11B.1.177.720.00339
ORF1ab/nsp31682S1682StcCtcT11B.1.177.750.001041
ORF1ab/nsp31682S1682StcCtcT11B.1.214.10.02
ORF1ab/nsp31682S1682StcCtcT11B.1.2230.002778
ORF1ab/nsp31682S1682StcCtcT11B.1.240.20.030303
ORF1ab/nsp31682S1682StcCtcT11B.1.258.110.000396
ORF1ab/nsp31682S1682StcCtcT11B.1.258.220.002667
ORF1ab/nsp31682S1682StcCtcT11B.1.258.30.001675
ORF1ab/nsp31682S1682StcCtcT11B.1.2790.000514
ORF1ab/nsp31682S1682StcCtcT11B.1.2840.013158
ORF1ab/nsp31682S1682StcCtcT11B.1.3060.005714
ORF1ab/nsp31682S1682StcCtcT11B.1.3200.001245
ORF1ab/nsp31682S1682StcCtcT11B.1.3290.000608
ORF1ab/nsp31682S1682StcCtcT11B.1.3380.008621
ORF1ab/nsp31682S1682StcCtcT11B.1.36.360.000602
ORF1ab/nsp31682S1682StcCtcT11B.1.3610.001289
ORF1ab/nsp31682S1682StcCtcT11B.1.3710.001122
ORF1ab/nsp31682S1682StcCtcT11B.1.3770.004566
ORF1ab/nsp31682S1682StcCtcT11B.1.3880.090909
ORF1ab/nsp31682S1682StcCtcT11B.1.4200.010417
ORF1ab/nsp31682S1682StcCtcT11B.1.4280.00102
ORF1ab/nsp31682S1682StcCtcT11B.1.4360.001029
ORF1ab/nsp31682S1682StcCtcT11B.1.4530.003236
ORF1ab/nsp31682S1682StcCtcT11B.1.4990.00105
ORF1ab/nsp31682S1682StcCtcT11B.1.5100.026316
ORF1ab/nsp31682S1682StcCtcT11B.1.5410.004425
ORF1ab/nsp31682S1682StcCtcT11B.1.5510.00129
ORF1ab/nsp31682S1682StcCtcT11B.1.5760.000907
ORF1ab/nsp31682S1682StcCtcT11B.1.5820.000491
ORF1ab/nsp31682S1682StcCtcT11B.1.5890.007576
ORF1ab/nsp31682S1682StcCtcT11B.1.5950.000261
ORF1ab/nsp31682S1682StcCtcT11B.1.6030.010638
ORF1ab/nsp31682S1682StcCtcT11B.100.008264
ORF1ab/nsp31682S1682StcCtcT11B.3.10.001658
ORF1ab/nsp31682S1682StcCtcT11B.40.002208
ORF1ab/nsp31682S1682StcCtcT11B.550.00295
ORF1ab/nsp31682S1682StcCtcT11B.60.00091
ORF1ab/nsp31682S1682StcCtcT11C.160.00106
ORF1ab/nsp31682S1682StcCtcT11C.170.055556
ORF1ab/nsp31682S1682StcCtcT11C.350.000774
ORF1ab/nsp31682S1682StcCtcT11L.30.003546
ORF1ab/nsp31682S1682StcCtcT11P.1.10.000318
ORF1ab/nsp31682S1682StcCtcT11P.50.013699
ORF1ab/nsp31682S1682StcCtcT11Q.60.006623
ORF1ab/nsp31682S1682StcCtcT11W.40.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.