CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1672

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31672I1672II2490IsynatCatT12925128980.9979117733-7735
ORF1ab/nsp31672I1672II2490IsynatCatA12925270.002088977733-7735
ORF1ab/nsp31672I1672TI2490TnonsynaTcaCc2322310.995697733-7735
ORF1ab/nsp31672I1672TI2490TnonsynaTCaCT23210.004310347733-7735
ORF1ab/nsp31672I1672VI2490VnonsynAtcGtc2252240.9955567733-7735
ORF1ab/nsp31672I1672VI2490VnonsynAtCGtT22510.004444447733-7735
ORF1ab/nsp31672I1672SI2490SnonsynaTcaGc1671660.9940127733-7735
ORF1ab/nsp31672I1672SI2490SnonsynaTCaGT16710.005988027733-7735
ORF1ab/nsp31672I1672delI2490deldelATC---13013017733-7735
ORF1ab/nsp31672I1672NI2490NnonsynaTcaAc101017733-7735
ORF1ab/nsp31672I1672MI2490MnonsynatCatG101017733-7735
ORF1ab/nsp31672I1672LI2490LnonsynAtcCtc1060.67733-7735
ORF1ab/nsp31672I1672LI2490LnonsynAtCCtT1030.37733-7735
ORF1ab/nsp31672I1672LI2490LnonsynAtCTtA1010.17733-7735
ORF1ab/nsp31672I1672FI2490FnonsynAtcTtc8817733-7735
ORF1ab/nsp31672I1672del1I2490del1delAtC-tA420.57733-7735
ORF1ab/nsp31672I1672del1I2490del1delatCat-410.257733-7735
ORF1ab/nsp31672I1672del1I2490del1delaTca-c410.257733-7735
ORF1ab/nsp31672I1672AI2490AnonsynATCGCT310.3333337733-7735
ORF1ab/nsp31672I1672AI2490AnonsynATCGCG310.3333337733-7735
ORF1ab/nsp31672I1672AI2490AnonsynATcGCc310.3333337733-7735
ORF1ab/nsp31672I1672del2I2490del2delaTCa--2217733-7735
ORF1ab/nsp31672I1672YI2490YnonsynATcTAc2217733-7735
ORF1ab/nsp31672I1672KI2490KnonsynaTCaAA1117733-7735
ORF1ab/nsp31672I1672RI2490RnonsynATCCGT1117733-7735

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31672I1672IatCatT1289812925All0.002467
ORF1ab/nsp31672I1672IatCatA2712925All0.000005
ORF1ab/nsp31672I1672IatCatT36273632B.1.1.70.003247
ORF1ab/nsp31672I1672IatCatA53632B.1.1.70.000004
ORF1ab/nsp31672I1672IatCatT10481054B.1.617.20.003946
ORF1ab/nsp31672I1672IatCatA61054B.1.617.20.000023
ORF1ab/nsp31672I1672IatCatT830830AY.40.001292
ORF1ab/nsp31672I1672IatCatT509509AY.1030.00316
ORF1ab/nsp31672I1672IatCatT418419AY.30.004158
ORF1ab/nsp31672I1672IatCatA1419AY.30.00001
ORF1ab/nsp31672I1672IatCatT410410B.1.438.10.043977
ORF1ab/nsp31672I1672IatCatT379379AY.1020.010049
ORF1ab/nsp31672I1672IatCatT291291AY.3.10.02481
ORF1ab/nsp31672I1672IatCatT286286B.10.00262
ORF1ab/nsp31672I1672IatCatT270273B.1.1.3180.081473
ORF1ab/nsp31672I1672IatCatA3273B.1.1.3180.000905
ORF1ab/nsp31672I1672IatCatT267267AY.150.593333
ORF1ab/nsp31672I1672IatCatT252252B.1.6210.022307
ORF1ab/nsp31672I1672TaTcaCc231232All0.000044
ORF1ab/nsp31672I1672TaTCaCT1232All0
ORF1ab/nsp31672I1672VAtcGtc224225All0.000043
ORF1ab/nsp31672I1672VAtCGtT1225All0
ORF1ab/nsp31672I1672IatCatT206206AY.430.000913
ORF1ab/nsp31672I1672IatCatT202202AY.50.004171
ORF1ab/nsp31672I1672IatCatT189189B.1.1600.005894
ORF1ab/nsp31672I1672SaTcaGc166167All0.000032
ORF1ab/nsp31672I1672SaTCaGT1167All0
ORF1ab/nsp31672I1672IatCatT166166AY.250.000998
ORF1ab/nsp31672I1672IatCatT151151AY.39.10.005982
ORF1ab/nsp31672I1672IatCatT143143B.1.20.001259
ORF1ab/nsp31672I1672IatCatT139140B.1.3510.004132
ORF1ab/nsp31672I1672IatCatA1140B.1.3510.00003
ORF1ab/nsp31672I1672IatCatT135135AY.440.000822
ORF1ab/nsp31672I1672delATC---130130All0.000025
ORF1ab/nsp31672I1672IatCatT129129B.1.2430.008976
ORF1ab/nsp31672I1672IatCatT106107AY.390.002619
ORF1ab/nsp31672I1672IatCatA1107AY.390.000025
ORF1ab/nsp31672I1672IatCatT106106B.1.4970.033365
ORF1ab/nsp31672I1672IatCatT9797B.1.5960.008452
ORF1ab/nsp31672I1672IatCatT9393P.10.001465
ORF1ab/nsp31672I1672IatCatT9192B.1.4290.002141
ORF1ab/nsp31672I1672IatCatA192B.1.4290.000024
ORF1ab/nsp31672I1672IatCatT9191AY.1190.003213
ORF1ab/nsp31672I1672IatCatT9090B.1.2400.019401
ORF1ab/nsp31672I1672VAtcGtc8888AY.40.000137
ORF1ab/nsp31672I1672IatCatT8282AY.260.002321
ORF1ab/nsp31672I1672IatCatT8282B.1.6280.028894
ORF1ab/nsp31672I1672IatCatT7979AY.130.012717
ORF1ab/nsp31672I1672IatCatT7979AY.570.051837
ORF1ab/nsp31672I1672IatCatT7979B.1.5260.001857
ORF1ab/nsp31672I1672IatCatT6969B.1.10.001252
ORF1ab/nsp31672I1672IatCatT6565B.1.1770.000856
ORF1ab/nsp31672I1672IatCatT6464AY.60.002632
ORF1ab/nsp31672I1672delATC---5858B.1.1.70.000052
ORF1ab/nsp31672I1672SaTcaGc4949AY.200.001904
ORF1ab/nsp31672I1672IatCatT4242B.1.1.5190.001668
ORF1ab/nsp31672I1672IatCatT4040AY.1170.003381
ORF1ab/nsp31672I1672TaTcaCc4040AY.30.000398
ORF1ab/nsp31672I1672IatCatT3838B.1.4270.001919
ORF1ab/nsp31672I1672IatCatT3536AY.750.001961
ORF1ab/nsp31672I1672IatCatA136AY.750.000056
ORF1ab/nsp31672I1672IatCatT3535AY.200.00136
ORF1ab/nsp31672I1672SaTcaGc3131B.1.10.000562
ORF1ab/nsp31672I1672IatCatT3131B.1.3670.024564
ORF1ab/nsp31672I1672IatCatT3030B.1.1.1201
ORF1ab/nsp31672I1672IatCatT2929AY.330.001937
ORF1ab/nsp31672I1672IatCatT2929B.1.1.4160.026244
ORF1ab/nsp31672I1672IatCatT2727AY.230.001883
ORF1ab/nsp31672I1672IatCatT2727B.1.1.2220.005508
ORF1ab/nsp31672I1672TaTcaCc2727B.1.1.70.000024
ORF1ab/nsp31672I1672IatCatT2727B.1.258.60.529412
ORF1ab/nsp31672I1672IatCatT2424AY.46.60.001733
ORF1ab/nsp31672I1672TaTcaCc2323AY.1030.000143
ORF1ab/nsp31672I1672IatCatT2222AY.1180.001378
ORF1ab/nsp31672I1672IatCatT2222AY.1200.000818
ORF1ab/nsp31672I1672IatCatT2222AY.290.000347
ORF1ab/nsp31672I1672VAtcGtc2222AY.390.000544
ORF1ab/nsp31672I1672IatCatT2222AY.4.20.000477
ORF1ab/nsp31672I1672IatCatT2222AY.4.30.018519
ORF1ab/nsp31672I1672IatCatT2222B.1.2210.001563
ORF1ab/nsp31672I1672IatCatT2121B.1.360.003064
ORF1ab/nsp31672I1672VAtcGtc2020B.1.1.70.000018
ORF1ab/nsp31672I1672IatCatT1919AY.1050.012219
ORF1ab/nsp31672I1672IatCatT1919AY.420.000764
ORF1ab/nsp31672I1672IatCatT1818AY.1000.000828
ORF1ab/nsp31672I1672SaTcaGc1818AY.50.000372
ORF1ab/nsp31672I1672IatCatT1818B.1.617.10.002321
ORF1ab/nsp31672I1672IatCatT1717AY.610.001781
ORF1ab/nsp31672I1672IatCatT1616AY.190.018244
ORF1ab/nsp31672I1672IatCatT1616B.1.1.4340.005577
ORF1ab/nsp31672I1672VAtcGtc1616B.1.617.20.00006
ORF1ab/nsp31672I1672VAtcGtc1515AY.1030.000093
ORF1ab/nsp31672I1672IatCatT1515B.1.5750.004551
ORF1ab/nsp31672I1672IatCatT1414AY.340.001358
ORF1ab/nsp31672I1672SaTcaGc1414AY.880.012378
ORF1ab/nsp31672I1672SaTcaGc1414B.1.1.70.000013
ORF1ab/nsp31672I1672IatCatT1214C.370.001393
ORF1ab/nsp31672I1672IatCatA214C.370.000232
ORF1ab/nsp31672I1672IatCatT1313AY.120.10.004173
ORF1ab/nsp31672I1672IatCatT1313AY.470.000404
ORF1ab/nsp31672I1672IatCatT1313B.1.2580.000865
ORF1ab/nsp31672I1672IatCatT1313B.1.6370.00095
ORF1ab/nsp31672I1672IatCatT1212AY.450.00146
ORF1ab/nsp31672I1672IatCatT1212AY.46.40.001974
ORF1ab/nsp31672I1672IatCatT1212B.400.004372
ORF1ab/nsp31672I1672IatCatT1111AY.1130.001566
ORF1ab/nsp31672I1672TaTcaCc1111AY.200.000428
ORF1ab/nsp31672I1672IatCatT1111AY.530.003163
ORF1ab/nsp31672I1672IatCatT1111AY.9.20.000404
ORF1ab/nsp31672I1672TaTcaCc1111AY.9.20.000404
ORF1ab/nsp31672I1672IatCatT1111D.20.000825
ORF1ab/nsp31672I1672MatCatG1010All0.000002
ORF1ab/nsp31672I1672NaTcaAc1010All0.000002
ORF1ab/nsp31672I1672LAtcCtc610All0.000001
ORF1ab/nsp31672I1672LAtCCtT310All0.000001
ORF1ab/nsp31672I1672LAtCTtA110All0
ORF1ab/nsp31672I1672IatCatT1010AY.700.002085
ORF1ab/nsp31672I1672IatCatT1010B.1.1.2910.007424
ORF1ab/nsp31672I1672TaTcaCc1010B.1.617.20.000038
ORF1ab/nsp31672I1672IatCatT1010P.1.140.000478
ORF1ab/nsp31672I1672IatCatT99AY.730.005988
ORF1ab/nsp31672I1672IatCatT99AY.980.000711
ORF1ab/nsp31672I1672IatCatT99AY.98.10.000436
ORF1ab/nsp31672I1672IatCatT99AY.99.20.000829
ORF1ab/nsp31672I1672IatCatT99B0.00115
ORF1ab/nsp31672I1672IatCatT99B.1.1.2140.000499
ORF1ab/nsp31672I1672IatCatT99B.1.1.630.003472
ORF1ab/nsp31672I1672IatCatT99B.1.177.620.010727
ORF1ab/nsp31672I1672IatCatT99B.1.4000.003861
ORF1ab/nsp31672I1672TaTcaCc99B.1.4581
ORF1ab/nsp31672I1672IatCatT99P.1.10.002859
ORF1ab/nsp31672I1672IatCatT99P.1.150.002091
ORF1ab/nsp31672I1672FAtcTtc88All0.000002
ORF1ab/nsp31672I1672TaTcaCc88AY.390.000198
ORF1ab/nsp31672I1672MatCatG88AY.40.000012
ORF1ab/nsp31672I1672IatCatT88B.1.1.2790.008969
ORF1ab/nsp31672I1672IatCatT88B.1.177.570.002248
ORF1ab/nsp31672I1672IatCatT88B.1.3460.010485
ORF1ab/nsp31672I1672IatCatT88B.1.36.10.009122
ORF1ab/nsp31672I1672IatCatT88P.20.001493
ORF1ab/nsp31672I1672IatCatT77AY.1210.000947
ORF1ab/nsp31672I1672TaTcaCc77AY.40.000011
ORF1ab/nsp31672I1672IatCatT77AY.540.000667
ORF1ab/nsp31672I1672IatCatT77AY.90.000473
ORF1ab/nsp31672I1672TaTcaCc77B.10.000064
ORF1ab/nsp31672I1672IatCatT77B.1.1.2160.006233
ORF1ab/nsp31672I1672IatCatT77B.1.1.3170.002882
ORF1ab/nsp31672I1672IatCatT77B.1.177.860.001284
ORF1ab/nsp31672I1672IatCatT77B.1.4090.005469
ORF1ab/nsp31672I1672IatCatT66AY.1160.001721
ORF1ab/nsp31672I1672IatCatT66AY.140.000528
ORF1ab/nsp31672I1672IatCatT66AY.16.10.00282
ORF1ab/nsp31672I1672TaTcaCc66AY.290.000095
ORF1ab/nsp31672I1672IatCatT66AY.460.000624
ORF1ab/nsp31672I1672TaTcaCc66AY.46.60.000433
ORF1ab/nsp31672I1672IatCatT66AY.670.002786
ORF1ab/nsp31672I1672IatCatT66AY.690.00112
ORF1ab/nsp31672I1672IatCatT66B.1.1.1330.050847
ORF1ab/nsp31672I1672IatCatT66B.1.1.3480.004777
ORF1ab/nsp31672I1672IatCatT66B.1.177.400.030928
ORF1ab/nsp31672I1672IatCatT66B.1.258.170.000624
ORF1ab/nsp31672I1672IatCatT66B.1.36.350.015625
ORF1ab/nsp31672I1672IatCatT66B.1.5250.000679
ORF1ab/nsp31672I1672SaTcaGc66B.1.5260.000141
ORF1ab/nsp31672I1672IatCatT66C.160.006363
ORF1ab/nsp31672I1672IatCatT66P.30.009569
ORF1ab/nsp31672I1672IatCatT66Q.10.000758
ORF1ab/nsp31672I1672IatCatT55AY.1100.000563
ORF1ab/nsp31672I1672SaTcaGc55AY.290.000079
ORF1ab/nsp31672I1672IatCatT55AY.34.10.00255
ORF1ab/nsp31672I1672SaTcaGc55AY.40.000008
ORF1ab/nsp31672I1672IatCatT55AY.550.004587
ORF1ab/nsp31672I1672IatCatT55AY.630.001934
ORF1ab/nsp31672I1672TaTcaCc55AY.840.002187
ORF1ab/nsp31672I1672IatCatT55B.1.1.3060.002192
ORF1ab/nsp31672I1672delATC---55B.1.1770.000066
ORF1ab/nsp31672I1672TaTcaCc55B.1.5260.000118
ORF1ab/nsp31672I1672IatCatT55B.1.5880.00455
ORF1ab/nsp31672I1672delATC---55B.1.617.20.000019
ORF1ab/nsp31672I1672IatCatT55Q.80.000825
ORF1ab/nsp31672I1672delATC---440.222222
ORF1ab/nsp31672I1672del1AtC-tA24All0
ORF1ab/nsp31672I1672del1aTca-c14All0
ORF1ab/nsp31672I1672del1atCat-14All0
ORF1ab/nsp31672I1672IatCatT44AY.20.001425
ORF1ab/nsp31672I1672IatCatT44AY.270.000259
ORF1ab/nsp31672I1672IatCatT44AY.380.001997
ORF1ab/nsp31672I1672IatCatT44AY.4.2.10.000596
ORF1ab/nsp31672I1672VAtcGtc44AY.430.000018
ORF1ab/nsp31672I1672TaTcaCc44AY.430.000018
ORF1ab/nsp31672I1672IatCatT44AY.770.00451
ORF1ab/nsp31672I1672IatCatT44AY.920.001149
ORF1ab/nsp31672I1672NaTcaAc44B.1.1.70.000004
ORF1ab/nsp31672I1672LAtCCtT24B.1.1.70.000002
ORF1ab/nsp31672I1672LAtCTtA14B.1.1.70.000001
ORF1ab/nsp31672I1672LAtcCtc14B.1.1.70.000001
ORF1ab/nsp31672I1672IatCatT44B.1.110.30.002874
ORF1ab/nsp31672I1672IatCatT44B.1.177.70.000659
ORF1ab/nsp31672I1672IatCatT44B.1.2100.008529
ORF1ab/nsp31672I1672IatCatT44B.1.2390.004884
ORF1ab/nsp31672I1672IatCatT44B.1.351.20.00121
ORF1ab/nsp31672I1672IatCatT44B.1.36.290.002069
ORF1ab/nsp31672I1672IatCatT44B.1.36.360.002408
ORF1ab/nsp31672I1672IatCatT44B.1.3690.001141
ORF1ab/nsp31672I1672IatCatT44B.1.466.20.001565
ORF1ab/nsp31672I1672IatCatT44B.1.5690.057971
ORF1ab/nsp31672I1672IatCatT44B.1.619.10.002566
ORF1ab/nsp31672I1672IatCatT34B.6.60.002667
ORF1ab/nsp31672I1672IatCatA14B.6.60.000889
ORF1ab/nsp31672I1672IatCatT44Q.30.00058
ORF1ab/nsp31672I1672IatCatT44R.10.00036
ORF1ab/nsp31672I1672IatCatT33A.20.001985
ORF1ab/nsp31672I1672AATCGCT13All0
ORF1ab/nsp31672I1672AATcGCc13All0
ORF1ab/nsp31672I1672AATCGCG13All0
ORF1ab/nsp31672I1672TaTcaCc33AY.1000.000138
ORF1ab/nsp31672I1672IatCatT33AY.1060.001005
ORF1ab/nsp31672I1672IatCatT33AY.160.001139
ORF1ab/nsp31672I1672IatCatT33AY.240.001293
ORF1ab/nsp31672I1672VAtcGtc33AY.250.000018
ORF1ab/nsp31672I1672IatCatT33AY.7.10.000338
ORF1ab/nsp31672I1672TaTcaCc33AY.710.001425
ORF1ab/nsp31672I1672IatCatT33AY.740.000347
ORF1ab/nsp31672I1672IatCatT33AY.840.001312
ORF1ab/nsp31672I1672IatCatT33AY.850.001282
ORF1ab/nsp31672I1672IatCatT33AY.910.002191
ORF1ab/nsp31672I1672IatCatT33AY.930.000819
ORF1ab/nsp31672I1672IatCatT33AY.990.003148
ORF1ab/nsp31672I1672IatCatT33AZ.20.002463
ORF1ab/nsp31672I1672VAtcGtc33B0.000383
ORF1ab/nsp31672I1672IatCatT33B.1.1.1410.006036
ORF1ab/nsp31672I1672IatCatA23B.1.1.3720.001377
ORF1ab/nsp31672I1672IatCatT13B.1.1.3720.000689
ORF1ab/nsp31672I1672IatCatT33B.1.1.4660.026087
ORF1ab/nsp31672I1672TaTcaCc33B.1.1770.00004
ORF1ab/nsp31672I1672IatCatT33B.1.177.260.020979
ORF1ab/nsp31672I1672IatCatT33B.1.177.330.004934
ORF1ab/nsp31672I1672IatCatT33B.1.1990.012397
ORF1ab/nsp31672I1672VAtcGtc33B.1.20.000026
ORF1ab/nsp31672I1672IatCatT33B.1.2140.010989
ORF1ab/nsp31672I1672IatCatT33B.1.2340.000396
ORF1ab/nsp31672I1672IatCatT33B.1.258.110.001189
ORF1ab/nsp31672I1672IatCatT33B.1.3050.006452
ORF1ab/nsp31672I1672VAtcGtc33B.1.360.000438
ORF1ab/nsp31672I1672IatCatT33B.1.36.180.001261
ORF1ab/nsp31672I1672IatCatT33B.1.36.80.003
ORF1ab/nsp31672I1672IatCatT33B.1.3620.004622
ORF1ab/nsp31672I1672IatCatT33B.1.4780.035294
ORF1ab/nsp31672I1672IatCatT33B.1.5770.002062
ORF1ab/nsp31672I1672IatCatT33B.1.6090.001438
ORF1ab/nsp31672I1672SaTcaGc33B.1.617.20.000011
ORF1ab/nsp31672I1672IatCatT33B.1.9.40.018405
ORF1ab/nsp31672I1672del1AtC-tA220.111111
ORF1ab/nsp31672I1672IatCatT22A0.000774
ORF1ab/nsp31672I1672delATC---22A0.000774
ORF1ab/nsp31672I1672TaTcaCc22A.10.000564
ORF1ab/nsp31672I1672IatCatT22AD.20.000438
ORF1ab/nsp31672I1672del2aTCa--22All0
ORF1ab/nsp31672I1672YATcTAc22All0
ORF1ab/nsp31672I1672IatCatT22AY.100.00106
ORF1ab/nsp31672I1672VAtcGtc22AY.1000.000092
ORF1ab/nsp31672I1672VAtcGtc22AY.1020.000053
ORF1ab/nsp31672I1672TaTcaCc22AY.1040.003968
ORF1ab/nsp31672I1672IatCatT22AY.1080.002205
ORF1ab/nsp31672I1672delATC---22AY.1110.000366
ORF1ab/nsp31672I1672IatCatT22AY.1140.000462
ORF1ab/nsp31672I1672IatCatT22AY.116.10.000623
ORF1ab/nsp31672I1672TaTcaCc22AY.1190.000071
ORF1ab/nsp31672I1672delATC---22AY.1200.000074
ORF1ab/nsp31672I1672VAtcGtc22AY.1200.000074
ORF1ab/nsp31672I1672TaTcaCc22AY.120.10.000642
ORF1ab/nsp31672I1672delATC---22AY.190.002281
ORF1ab/nsp31672I1672TaTcaCc22AY.230.000139
ORF1ab/nsp31672I1672NaTcaAc22AY.250.000012
ORF1ab/nsp31672I1672SaTcaGc22AY.250.000012
ORF1ab/nsp31672I1672VAtcGtc22AY.260.000057
ORF1ab/nsp31672I1672IatCatT22AY.300.000791
ORF1ab/nsp31672I1672IatCatT22AY.360.000296
ORF1ab/nsp31672I1672IatCatT22AY.370.000632
ORF1ab/nsp31672I1672TaTcaCc22AY.39.10.000079
ORF1ab/nsp31672I1672IatCatT22AY.39.20.003082
ORF1ab/nsp31672I1672delATC---22AY.40.000003
ORF1ab/nsp31672I1672IatCatT22AY.400.001929
ORF1ab/nsp31672I1672SaTcaGc22AY.420.00008
ORF1ab/nsp31672I1672delATC---22AY.430.000009
ORF1ab/nsp31672I1672AATCGCT12AY.430.000004
ORF1ab/nsp31672I1672AATCGCG12AY.430.000004
ORF1ab/nsp31672I1672VAtcGtc22AY.460.000208
ORF1ab/nsp31672I1672delATC---22AY.46.20.001271
ORF1ab/nsp31672I1672TaTcaCc22AY.46.40.000329
ORF1ab/nsp31672I1672delATC---22AY.50.000041
ORF1ab/nsp31672I1672TaTcaCc22AY.540.000191
ORF1ab/nsp31672I1672IatCatT22AY.590.001059
ORF1ab/nsp31672I1672delATC---22AY.60.000082
ORF1ab/nsp31672I1672IatCatT22AY.710.00095
ORF1ab/nsp31672I1672IatCatT22AY.75.10.000361
ORF1ab/nsp31672I1672IatCatT22AY.790.002421
ORF1ab/nsp31672I1672VAtcGtc22AY.9.20.000073
ORF1ab/nsp31672I1672delATC---22B.10.000018
ORF1ab/nsp31672I1672VAtcGtc22B.1.10.000036
ORF1ab/nsp31672I1672TaTcaCc22B.1.10.000036
ORF1ab/nsp31672I1672delATC---22B.1.1.2360.013793
ORF1ab/nsp31672I1672IatCatT22B.1.1.2650.006309
ORF1ab/nsp31672I1672IatCatT22B.1.1.2770.001517
ORF1ab/nsp31672I1672TaTcaCc22B.1.1.3060.000877
ORF1ab/nsp31672I1672IatCatT22B.1.1.3110.000716
ORF1ab/nsp31672I1672IatCatT22B.1.1.3690.000892
ORF1ab/nsp31672I1672IatCatT22B.1.1.5280.009615
ORF1ab/nsp31672I1672YATcTAc22B.1.1.70.000002
ORF1ab/nsp31672I1672IatCatT22B.1.1.700.000682
ORF1ab/nsp31672I1672IatCatT22B.1.160.180.014599
ORF1ab/nsp31672I1672VAtcGtc22B.1.1770.000026
ORF1ab/nsp31672I1672IatCatT22B.1.177.100.001756
ORF1ab/nsp31672I1672TaTcaCc22B.1.177.200.003035
ORF1ab/nsp31672I1672IatCatT22B.1.177.210.000153
ORF1ab/nsp31672I1672delATC---22B.1.177.210.000153
ORF1ab/nsp31672I1672delATC---22B.1.177.40.000422
ORF1ab/nsp31672I1672IatCatT22B.1.177.440.001038
ORF1ab/nsp31672I1672delATC---22B.1.177.60.001953
ORF1ab/nsp31672I1672IatCatT22B.1.177.730.001133
ORF1ab/nsp31672I1672IatCatT22B.1.177.820.000955
ORF1ab/nsp31672I1672delATC---22B.1.2580.000133
ORF1ab/nsp31672I1672IatCatT22B.1.258.140.001961
ORF1ab/nsp31672I1672IatCatT22B.1.3110.000549
ORF1ab/nsp31672I1672IatCatT22B.1.3290.001215
ORF1ab/nsp31672I1672IatCatT22B.1.3960.001411
ORF1ab/nsp31672I1672IatCatT22B.1.4040.002604
ORF1ab/nsp31672I1672IatCatT22B.1.4280.002041
ORF1ab/nsp31672I1672IatCatT22B.1.4730.038462
ORF1ab/nsp31672I1672IatCatT22B.1.5030.004975
ORF1ab/nsp31672I1672IatCatT22B.1.5170.000854
ORF1ab/nsp31672I1672IatCatT22B.1.5210.00995
ORF1ab/nsp31672I1672IatCatT22B.1.5900.009091
ORF1ab/nsp31672I1672IatCatT22B.1.621.10.001012
ORF1ab/nsp31672I1672IatCatT22B.430.028571
ORF1ab/nsp31672I1672IatCatT22C.350.001548
ORF1ab/nsp31672I1672VAtcGtc22P.10.000032
ORF1ab/nsp31672I1672IatCatT22P.1.120.000968
ORF1ab/nsp31672I1672VAtcGtc22P.1.140.000096
ORF1ab/nsp31672I1672IatCatT22P.1.70.000639
ORF1ab/nsp31672I1672IatCatT22P.70.008734
ORF1ab/nsp31672I1672TaTcaCc11A.20.000662
ORF1ab/nsp31672I1672IatCatT11A.2.40.003367
ORF1ab/nsp31672I1672IatCatA11A.2.50.000499
ORF1ab/nsp31672I1672IatCatT11A.23.10.000704
ORF1ab/nsp31672I1672NaTcaAc11A.23.10.000704
ORF1ab/nsp31672I1672RATCCGT11All0
ORF1ab/nsp31672I1672KaTCaAA11All0
ORF1ab/nsp31672I1672IatCatT11AN.10.02
ORF1ab/nsp31672I1672IatCatT11AW.10.003049
ORF1ab/nsp31672I1672IatCatT11AY.10.000396
ORF1ab/nsp31672I1672SaTcaGc11AY.1000.000046
ORF1ab/nsp31672I1672delATC---11AY.1000.000046
ORF1ab/nsp31672I1672SaTcaGc11AY.1020.000027
ORF1ab/nsp31672I1672TaTcaCc11AY.1020.000027
ORF1ab/nsp31672I1672TaTcaCc11AY.1060.000335
ORF1ab/nsp31672I1672TaTcaCc11AY.1070.000466
ORF1ab/nsp31672I1672VAtcGtc11AY.1100.000113
ORF1ab/nsp31672I1672IatCatT11AY.1110.000183
ORF1ab/nsp31672I1672IatCatT11AY.1150.005208
ORF1ab/nsp31672I1672SaTcaGc11AY.1170.000085
ORF1ab/nsp31672I1672VAtcGtc11AY.1170.000085
ORF1ab/nsp31672I1672SaTcaGc11AY.1180.000063
ORF1ab/nsp31672I1672VAtcGtc11AY.1180.000063
ORF1ab/nsp31672I1672TaTCaCT11AY.1180.000063
ORF1ab/nsp31672I1672LAtcCtc11AY.120.10.000321
ORF1ab/nsp31672I1672VAtcGtc11AY.130.000161
ORF1ab/nsp31672I1672MatCatG11AY.130.000161
ORF1ab/nsp31672I1672LAtcCtc11AY.130.000161
ORF1ab/nsp31672I1672VAtcGtc11AY.230.00007
ORF1ab/nsp31672I1672SaTcaGc11AY.23.10.000417
ORF1ab/nsp31672I1672delATC---11AY.250.000006
ORF1ab/nsp31672I1672FAtcTtc11AY.250.000006
ORF1ab/nsp31672I1672TaTcaCc11AY.260.000028
ORF1ab/nsp31672I1672IatCatT11AY.280.00189
ORF1ab/nsp31672I1672VAtcGtc11AY.290.000016
ORF1ab/nsp31672I1672IatCatT11AY.29.10.000221
ORF1ab/nsp31672I1672VAtcGtc11AY.3.10.000085
ORF1ab/nsp31672I1672IatCatT11AY.320.000532
ORF1ab/nsp31672I1672TaTcaCc11AY.330.000067
ORF1ab/nsp31672I1672delATC---11AY.330.000067
ORF1ab/nsp31672I1672IatCatT11AY.350.000233
ORF1ab/nsp31672I1672VAtcGtc11AY.380.000499
ORF1ab/nsp31672I1672del2aTCa--11AY.40.000002
ORF1ab/nsp31672I1672VAtcGtc11AY.4.20.000022
ORF1ab/nsp31672I1672TaTcaCc11AY.4.2.10.000149
ORF1ab/nsp31672I1672delATC---11AY.4.50.000107
ORF1ab/nsp31672I1672IatCatT11AY.4.50.000107
ORF1ab/nsp31672I1672IatCatT11AY.410.000294
ORF1ab/nsp31672I1672SaTcaGc11AY.430.000004
ORF1ab/nsp31672I1672NaTcaAc11AY.430.000004
ORF1ab/nsp31672I1672VAtCGtT11AY.440.000006
ORF1ab/nsp31672I1672delATC---11AY.440.000006
ORF1ab/nsp31672I1672NaTcaAc11AY.440.000006
ORF1ab/nsp31672I1672IatCatT11AY.46.20.000635
ORF1ab/nsp31672I1672VAtcGtc11AY.46.50.000198
ORF1ab/nsp31672I1672IatCatT11AY.46.50.000198
ORF1ab/nsp31672I1672FAtcTtc11AY.470.000031
ORF1ab/nsp31672I1672LAtcCtc11AY.50.000021
ORF1ab/nsp31672I1672TaTcaCc11AY.50.000021
ORF1ab/nsp31672I1672IatCatT11AY.5.30.000337
ORF1ab/nsp31672I1672IatCatT11AY.5.40.000277
ORF1ab/nsp31672I1672delATC---11AY.520.000814
ORF1ab/nsp31672I1672VAtcGtc11AY.540.000095
ORF1ab/nsp31672I1672IatCatT11AY.560.001605
ORF1ab/nsp31672I1672IatCatT11AY.580.000907
ORF1ab/nsp31672I1672TaTcaCc11AY.60.000041
ORF1ab/nsp31672I1672VAtcGtc11AY.60.000041
ORF1ab/nsp31672I1672IatCatT11AY.600.000938
ORF1ab/nsp31672I1672SaTcaGc11AY.610.000105
ORF1ab/nsp31672I1672IatCatT11AY.650.000533
ORF1ab/nsp31672I1672del1aTca-c11AY.670.000464
ORF1ab/nsp31672I1672IatCatT11AY.70.000196
ORF1ab/nsp31672I1672SaTcaGc11AY.70.000196
ORF1ab/nsp31672I1672IatCatT11AY.720.001361
ORF1ab/nsp31672I1672delATC---11AY.720.001361
ORF1ab/nsp31672I1672VAtcGtc11AY.740.000116
ORF1ab/nsp31672I1672VAtcGtc11AY.750.000056
ORF1ab/nsp31672I1672SaTcaGc11AY.75.10.00018
ORF1ab/nsp31672I1672FAtcTtc11AY.75.10.00018
ORF1ab/nsp31672I1672SaTcaGc11AY.770.001127
ORF1ab/nsp31672I1672delATC---11AY.810.001992
ORF1ab/nsp31672I1672FAtcTtc11AY.840.000437
ORF1ab/nsp31672I1672delATC---11AY.90.000068
ORF1ab/nsp31672I1672IatCatT11AY.9.10.000084
ORF1ab/nsp31672I1672IatCatT11AY.900.000684
ORF1ab/nsp31672I1672FAtcTtc11AY.910.00073
ORF1ab/nsp31672I1672TaTcaCc11AY.920.000287
ORF1ab/nsp31672I1672IatCatT11AY.970.001701
ORF1ab/nsp31672I1672VAtcGtc11AY.98.10.000048
ORF1ab/nsp31672I1672AATcGCc11AY.990.001049
ORF1ab/nsp31672I1672IatCatT11AY.99.10.001553
ORF1ab/nsp31672I1672VAtcGtc11AY.99.20.000092
ORF1ab/nsp31672I1672TaTcaCc11B0.000128
ORF1ab/nsp31672I1672VAtcGtc11B.10.000009
ORF1ab/nsp31672I1672SaTcaGc11B.10.000009
ORF1ab/nsp31672I1672MatCatG11B.10.000009
ORF1ab/nsp31672I1672FAtcTtc11B.1.10.000018
ORF1ab/nsp31672I1672delATC---11B.1.10.000018
ORF1ab/nsp31672I1672IatCatT11B.1.1.10.000327
ORF1ab/nsp31672I1672IatCatT11B.1.1.1230.017857
ORF1ab/nsp31672I1672IatCatT11B.1.1.1530.001095
ORF1ab/nsp31672I1672VAtcGtc11B.1.1.1530.001095
ORF1ab/nsp31672I1672IatCatT11B.1.1.1570.000913
ORF1ab/nsp31672I1672IatCatT11B.1.1.1610.003534
ORF1ab/nsp31672I1672delATC---11B.1.1.1700.001247
ORF1ab/nsp31672I1672IatCatT11B.1.1.1700.001247
ORF1ab/nsp31672I1672IatCatT11B.1.1.1860.003436
ORF1ab/nsp31672I1672IatCatT11B.1.1.1940.00495
ORF1ab/nsp31672I1672IatCatT11B.1.1.1960.005714
ORF1ab/nsp31672I1672IatCatT11B.1.1.1980.001468
ORF1ab/nsp31672I1672IatCatT11B.1.1.2200.001859
ORF1ab/nsp31672I1672IatCatT11B.1.1.2260.005814
ORF1ab/nsp31672I1672SaTcaGc11B.1.1.2530.002506
ORF1ab/nsp31672I1672IatCatT11B.1.1.280.000311
ORF1ab/nsp31672I1672IatCatT11B.1.1.3000.010753
ORF1ab/nsp31672I1672IatCatT11B.1.1.3030.002762
ORF1ab/nsp31672I1672VAtcGtc11B.1.1.3060.000438
ORF1ab/nsp31672I1672delATC---11B.1.1.3110.000358
ORF1ab/nsp31672I1672IatCatT11B.1.1.3260.001761
ORF1ab/nsp31672I1672IatCatT11B.1.1.330.000421
ORF1ab/nsp31672I1672IatCatT11B.1.1.3590.027778
ORF1ab/nsp31672I1672FAtcTtc11B.1.1.3650.005587
ORF1ab/nsp31672I1672delATC---11B.1.1.370.000193
ORF1ab/nsp31672I1672IatCatT11B.1.1.3710.010417
ORF1ab/nsp31672I1672IatCatT11B.1.1.3880.045455
ORF1ab/nsp31672I1672IatCatT11B.1.1.390.00051
ORF1ab/nsp31672I1672IatCatA11B.1.1.3980.003226
ORF1ab/nsp31672I1672IatCatT11B.1.1.4110.014706
ORF1ab/nsp31672I1672delATC---11B.1.1.460.004367
ORF1ab/nsp31672I1672IatCatT11B.1.1.50.008333
ORF1ab/nsp31672I1672IatCatT11B.1.1.5250.005464
ORF1ab/nsp31672I1672IatCatT11B.1.1.580.005376
ORF1ab/nsp31672I1672del1atCat-11B.1.1.70.000001
ORF1ab/nsp31672I1672del2aTCa--11B.1.1.70.000001
ORF1ab/nsp31672I1672FAtcTtc11B.1.1.70.000001
ORF1ab/nsp31672I1672IatCatT11B.1.1.710.006061
ORF1ab/nsp31672I1672IatCatT11B.1.1.990.02381
ORF1ab/nsp31672I1672IatCatT11B.1.1100.004525
ORF1ab/nsp31672I1672IatCatT11B.1.1110.001175
ORF1ab/nsp31672I1672IatCatT11B.1.1130.015625
ORF1ab/nsp31672I1672TaTcaCc11B.1.1600.000031
ORF1ab/nsp31672I1672IatCatT11B.1.160.140.002119
ORF1ab/nsp31672I1672IatCatT11B.1.160.160.000929
ORF1ab/nsp31672I1672IatCatT11B.1.160.70.002079
ORF1ab/nsp31672I1672IatCatT11B.1.177.120.000152
ORF1ab/nsp31672I1672IatCatT11B.1.177.150.000631
ORF1ab/nsp31672I1672delATC---11B.1.177.180.00116
ORF1ab/nsp31672I1672IatCatT11B.1.177.230.003236
ORF1ab/nsp31672I1672IatCatT11B.1.177.40.000211
ORF1ab/nsp31672I1672IatCatT11B.1.177.430.001477
ORF1ab/nsp31672I1672IatCatT11B.1.177.520.001757
ORF1ab/nsp31672I1672delATC---11B.1.177.540.000606
ORF1ab/nsp31672I1672IatCatT11B.1.177.550.002331
ORF1ab/nsp31672I1672IatCatT11B.1.177.560.000668
ORF1ab/nsp31672I1672delATC---11B.1.177.560.000668
ORF1ab/nsp31672I1672delATC---11B.1.177.570.000281
ORF1ab/nsp31672I1672TaTcaCc11B.1.177.580.001332
ORF1ab/nsp31672I1672IatCatT11B.1.177.580.001332
ORF1ab/nsp31672I1672IatCatT11B.1.177.610.043478
ORF1ab/nsp31672I1672TaTcaCc11B.1.177.620.001192
ORF1ab/nsp31672I1672VAtcGtc11B.1.177.70.000165
ORF1ab/nsp31672I1672delATC---11B.1.177.70.000165
ORF1ab/nsp31672I1672IatCatT11B.1.177.700.005917
ORF1ab/nsp31672I1672TaTcaCc11B.1.177.790.002342
ORF1ab/nsp31672I1672IatCatT11B.1.177.810.000189
ORF1ab/nsp31672I1672VAtcGtc11B.1.177.820.000477
ORF1ab/nsp31672I1672IatCatT11B.1.177.870.000728
ORF1ab/nsp31672I1672IatCatT11B.1.177.90.001332
ORF1ab/nsp31672I1672delATC---11B.1.1790.003759
ORF1ab/nsp31672I1672IatCatT11B.1.1870.033333
ORF1ab/nsp31672I1672IatCatT11B.1.214.20.0006
ORF1ab/nsp31672I1672IatCatT11B.1.2320.000537
ORF1ab/nsp31672I1672IatCatT11B.1.2360.002053
ORF1ab/nsp31672I1672TaTcaCc11B.1.2400.000216
ORF1ab/nsp31672I1672NaTcaAc11B.1.2430.00007
ORF1ab/nsp31672I1672LAtcCtc11B.1.2580.000067
ORF1ab/nsp31672I1672delATC---11B.1.258.100.011364
ORF1ab/nsp31672I1672IatCatT11B.1.258.30.001675
ORF1ab/nsp31672I1672IatCatT11B.1.258.40.003448
ORF1ab/nsp31672I1672IatCatT11B.1.2600.003344
ORF1ab/nsp31672I1672IatCatT11B.1.30.002618
ORF1ab/nsp31672I1672IatCatT11B.1.3200.001245
ORF1ab/nsp31672I1672IatCatT11B.1.3490.000715
ORF1ab/nsp31672I1672IatCatT11B.1.3500.002933
ORF1ab/nsp31672I1672VAtcGtc11B.1.3510.00003
ORF1ab/nsp31672I1672IatCatT11B.1.351.30.000876
ORF1ab/nsp31672I1672VAtcGtc11B.1.351.50.0006
ORF1ab/nsp31672I1672delATC---11B.1.360.000146
ORF1ab/nsp31672I1672SaTcaGc11B.1.36.100.004785
ORF1ab/nsp31672I1672SaTcaGc11B.1.36.160.001425
ORF1ab/nsp31672I1672IatCatT11B.1.36.380.001642
ORF1ab/nsp31672I1672IatCatT11B.1.3890.001002
ORF1ab/nsp31672I1672IatCatT11B.1.3950.007042
ORF1ab/nsp31672I1672IatCatT11B.1.3980.002976
ORF1ab/nsp31672I1672IatCatT11B.1.3990.001934
ORF1ab/nsp31672I1672IatCatT11B.1.4060.006061
ORF1ab/nsp31672I1672delATC---11B.1.4090.000781
ORF1ab/nsp31672I1672IatCatT11B.1.4160.001269
ORF1ab/nsp31672I1672delATC---11B.1.416.10.001563
ORF1ab/nsp31672I1672VAtcGtc11B.1.4270.00005
ORF1ab/nsp31672I1672IatCatT11B.1.428.20.033333
ORF1ab/nsp31672I1672SaTcaGc11B.1.4290.000024
ORF1ab/nsp31672I1672IatCatT11B.1.4370.020833
ORF1ab/nsp31672I1672IatCatT11B.1.4520.013699
ORF1ab/nsp31672I1672IatCatT11B.1.4700.001404
ORF1ab/nsp31672I1672VAtcGtc11B.1.5170.000427
ORF1ab/nsp31672I1672IatCatT11B.1.5240.001406
ORF1ab/nsp31672I1672IatCatT11B.1.5510.00129
ORF1ab/nsp31672I1672IatCatT11B.1.5610.000397
ORF1ab/nsp31672I1672delATC---11B.1.5610.000397
ORF1ab/nsp31672I1672IatCatT11B.1.564.10.001577
ORF1ab/nsp31672I1672IatCatT11B.1.5760.000907
ORF1ab/nsp31672I1672LAtCCtT11B.1.5770.000687
ORF1ab/nsp31672I1672RATCCGT11B.1.5770.000687
ORF1ab/nsp31672I1672SaTCaGT11B.1.5770.000687
ORF1ab/nsp31672I1672IatCatT11B.1.5870.001898
ORF1ab/nsp31672I1672IatCatT11B.1.5950.000261
ORF1ab/nsp31672I1672delATC---11B.1.5960.000087
ORF1ab/nsp31672I1672IatCatT11B.1.6100.003546
ORF1ab/nsp31672I1672KaTCaAA11B.1.617.20.000004
ORF1ab/nsp31672I1672SaTcaGc11B.1.619.10.000641
ORF1ab/nsp31672I1672VAtcGtc11B.1.6210.000089
ORF1ab/nsp31672I1672TaTcaCc11B.1.6230.000536
ORF1ab/nsp31672I1672IatCatT11B.1.930.000934
ORF1ab/nsp31672I1672IatCatT11B.230.002924
ORF1ab/nsp31672I1672IatCatT11B.30.000831
ORF1ab/nsp31672I1672IatCatT11B.40.002208
ORF1ab/nsp31672I1672IatCatT11B.60.00091
ORF1ab/nsp31672I1672TaTcaCc11C.1.20.004255
ORF1ab/nsp31672I1672IatCatA11C.180.002591
ORF1ab/nsp31672I1672IatCatT11C.20.016129
ORF1ab/nsp31672I1672IatCatT11C.30.007634
ORF1ab/nsp31672I1672LAtcCtc11C.350.000774
ORF1ab/nsp31672I1672IatCatT11C.360.000911
ORF1ab/nsp31672I1672IatCatT11C.90.030303
ORF1ab/nsp31672I1672IatCatT11N.50.001767
ORF1ab/nsp31672I1672delATC---11P.10.000016
ORF1ab/nsp31672I1672TaTcaCc11P.10.000016
ORF1ab/nsp31672I1672IatCatT11P.1.100.000269
ORF1ab/nsp31672I1672IatCatT11P.1.10.10.00813
ORF1ab/nsp31672I1672TaTcaCc11P.1.140.000048
ORF1ab/nsp31672I1672IatCatT11P.1.170.000162
ORF1ab/nsp31672I1672IatCatT11P.1.40.000977
ORF1ab/nsp31672I1672SaTcaGc11Q.10.000126
ORF1ab/nsp31672I1672delATC---11Q.10.000126
ORF1ab/nsp31672I1672VAtcGtc11Q.40.000455
ORF1ab/nsp31672I1672TaTcaCc11R.10.00009
ORF1ab/nsp31672I1672IatCatT11W.40.001351