CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1652 & Codon = gcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31652A1652AA2470AsyngcGgcC929216880.1816627673-7675

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31652A1652AgcGgcC16889292All0.000323
ORF1ab/nsp31652A1652AgcGgcC1071534B.1.1.70.000096
ORF1ab/nsp31652A1652AgcGgcC10391041B.1.5880.945405
ORF1ab/nsp31652A1652AgcGgcC5730AY.40.000008
ORF1ab/nsp31652A1652AgcGgcC2438AY.250.000012
ORF1ab/nsp31652A1652AgcGgcC188393B.1.617.20.000708
ORF1ab/nsp31652A1652AgcGgcC2310AY.430.000009
ORF1ab/nsp31652A1652AgcGgcC23262B.1.20.000203
ORF1ab/nsp31652A1652AgcGgcC79157B.10.000724
ORF1ab/nsp31652A1652AgcGgcC5135AY.440.00003
ORF1ab/nsp31652A1652AgcGgcC1103AY.1030.000006
ORF1ab/nsp31652A1652AgcGgcC8195AY.1000.003727
ORF1ab/nsp31652A1652AgcGgcC882AY.46.10.008214
ORF1ab/nsp31652A1652AgcGgcC3172AY.50.00064
ORF1ab/nsp31652A1652AgcGgcC171AY.1020.000027
ORF1ab/nsp31652A1652AgcGgcC5164B.1.5950.013309
ORF1ab/nsp31652A1652AgcGgcC144B.1.1.2140.000055
ORF1ab/nsp31652A1652AgcGgcC143AY.390.000025
ORF1ab/nsp31652A1652AgcGgcC143B.1.1770.000013
ORF1ab/nsp31652A1652AgcGgcC138B.1.3510.00003
ORF1ab/nsp31652A1652AgcGgcC2626B.1.588.11
ORF1ab/nsp31652A1652AgcGgcC125AY.200.000039
ORF1ab/nsp31652A1652AgcGgcC118B.1.177.70.000165
ORF1ab/nsp31652A1652AgcGgcC213B.1.1.5190.000079
ORF1ab/nsp31652A1652AgcGgcC99B.1.5670.03
ORF1ab/nsp31652A1652AgcGgcC38AY.610.000314
ORF1ab/nsp31652A1652AgcGgcC17B.1.1.2220.000204
ORF1ab/nsp31652A1652AgcGgcC26AY.1170.000169
ORF1ab/nsp31652A1652AgcGgcC25B.1.5960.000174
ORF1ab/nsp31652A1652AgcGgcC34AY.550.002752
ORF1ab/nsp31652A1652AgcGgcC14B.1.4270.00005
ORF1ab/nsp31652A1652AgcGgcC13A.23.10.000704
ORF1ab/nsp31652A1652AgcGgcC13AY.75.10.00018
ORF1ab/nsp31652A1652AgcGgcC12AY.980.000079
ORF1ab/nsp31652A1652AgcGgcC12B0.000128
ORF1ab/nsp31652A1652AgcGgcC22B.4.10.037736
ORF1ab/nsp31652A1652AgcGgcC11AU.30.00211
ORF1ab/nsp31652A1652AgcGgcC11AY.116.10.000311
ORF1ab/nsp31652A1652AgcGgcC11B.1.5820.000491
ORF1ab/nsp31652A1652AgcGgcC11P.1.40.000977