CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1558 & Codon = ccC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31558P1558PP2376PsynccGccC275682650.009612597391-7393

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31558P1558PccGccC26527568All0.000051
ORF1ab/nsp31558P1558PccGccC115364AY.750.000056
ORF1ab/nsp31558P1558PccGccC62151AY.40.000009
ORF1ab/nsp31558P1558PccGccC981944B.1.1.70.000088
ORF1ab/nsp31558P1558PccGccC141300B.1.617.20.000053
ORF1ab/nsp31558P1558PccGccC31129AY.430.000013
ORF1ab/nsp31558P1558PccGccC14343AY.250.000084
ORF1ab/nsp31558P1558PccGccC2216AY.440.000012
ORF1ab/nsp31558P1558PccGccC5160P.10.000079
ORF1ab/nsp31558P1558PccGccC1142AY.1030.000006
ORF1ab/nsp31558P1558PccGccC1117B.10.000009
ORF1ab/nsp31558P1558PccGccC189B.1.1770.000013
ORF1ab/nsp31558P1558PccGccC283B.1.10.000036
ORF1ab/nsp31558P1558PccGccC166AY.200.000039
ORF1ab/nsp31558P1558PccGccC5863AZ.20.047619
ORF1ab/nsp31558P1558PccGccC147AY.60.000041
ORF1ab/nsp31558P1558PccGccC246B.1.4290.000047
ORF1ab/nsp31558P1558PccGccC140AY.75.10.00018
ORF1ab/nsp31558P1558PccGccC539B.1.5260.000118
ORF1ab/nsp31558P1558PccGccC1036AY.360.001482
ORF1ab/nsp31558P1558PccGccC130B.1.1.2140.000055
ORF1ab/nsp31558P1558PccGccC129P.1.140.000048
ORF1ab/nsp31558P1558PccGccC126AY.330.000067
ORF1ab/nsp31558P1558PccGccC224B.1.3510.000059
ORF1ab/nsp31558P1558PccGccC223AY.420.00008
ORF1ab/nsp31558P1558PccGccC122B.1.1.2220.000204
ORF1ab/nsp31558P1558PccGccC122B.1.360.000146
ORF1ab/nsp31558P1558PccGccC118AY.290.000016
ORF1ab/nsp31558P1558PccGccC116AY.1190.000035
ORF1ab/nsp31558P1558PccGccC111AY.130.000161
ORF1ab/nsp31558P1558PccGccC111B0.000128
ORF1ab/nsp31558P1558PccGccC510AY.980.000395
ORF1ab/nsp31558P1558PccGccC16AY.1100.000113
ORF1ab/nsp31558P1558PccGccC45B.1.1.3480.003185
ORF1ab/nsp31558P1558PccGccC15B.1.2580.000067
ORF1ab/nsp31558P1558PccGccC45C.36.30.002269
ORF1ab/nsp31558P1558PccGccC44Q.40.001819
ORF1ab/nsp31558P1558PccGccC130.055556
ORF1ab/nsp31558P1558PccGccC13B.1.177.820.000477
ORF1ab/nsp31558P1558PccGccC22B.1.1.5230.003125
ORF1ab/nsp31558P1558PccGccC11B.1.1.3180.000302
ORF1ab/nsp31558P1558PccGccC11B.1.1.700.000341
ORF1ab/nsp31558P1558PccGccC11P.1.160.000374