CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1558 & Codon = cTg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31558P1558LP2376LnonsyncCgcTg3793780.9973617391-7393

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31558P1558LcCgcTg378379All0.000072
ORF1ab/nsp31558P1558LcCgcTg7171B.1.3510.002111
ORF1ab/nsp31558P1558LcCgcTg6868B.1.1.70.000061
ORF1ab/nsp31558P1558LcCgcTg3333B.10.000302
ORF1ab/nsp31558P1558LcCgcTg2020B.1.1600.000624
ORF1ab/nsp31558P1558LcCgcTg1313B.1.466.20.005086
ORF1ab/nsp31558P1558LcCgcTg1111AY.1200.000409
ORF1ab/nsp31558P1558LcCgcTg1111B.1.20.000097
ORF1ab/nsp31558P1558LcCgcTg1010A.23.10.007042
ORF1ab/nsp31558P1558LcCgcTg1010B.1.10.000181
ORF1ab/nsp31558P1558LcCgcTg88B.1.617.20.00003
ORF1ab/nsp31558P1558LcCgcTg88P.10.000126
ORF1ab/nsp31558P1558LcCgcTg77AY.40.000011
ORF1ab/nsp31558P1558LcCgcTg77R.10.00063
ORF1ab/nsp31558P1558LcCgcTg66AY.440.000037
ORF1ab/nsp31558P1558LcCgcTg55B.1.1.280.001556
ORF1ab/nsp31558P1558LcCgcTg44AY.1150.020833
ORF1ab/nsp31558P1558LcCgcTg44B.1.1.3480.003185
ORF1ab/nsp31558P1558LcCgcTg44B.1.36.160.005698
ORF1ab/nsp31558P1558LcCgcTg44B.60.00364
ORF1ab/nsp31558P1558LcCgcTg33AY.260.000085
ORF1ab/nsp31558P1558LcCgcTg33AY.430.000013
ORF1ab/nsp31558P1558LcCgcTg33AY.960.006224
ORF1ab/nsp31558P1558LcCgcTg33B.1.5090.002597
ORF1ab/nsp31558P1558LcCgcTg120.055556
ORF1ab/nsp31558P1558LcCgcTg22AY.1160.000574
ORF1ab/nsp31558P1558LcCgcTg22AY.230.000139
ORF1ab/nsp31558P1558LcCgcTg22AY.30.00002
ORF1ab/nsp31558P1558LcCgcTg22AY.460.000208
ORF1ab/nsp31558P1558LcCgcTg22B.1.1.10.000653
ORF1ab/nsp31558P1558LcCgcTg22B.1.1.2770.001517
ORF1ab/nsp31558P1558LcCgcTg22B.1.214.20.001199
ORF1ab/nsp31558P1558LcCgcTg22B.1.2580.000133
ORF1ab/nsp31558P1558LcCgcTg22B.1.4290.000047
ORF1ab/nsp31558P1558LcCgcTg22B.1.6370.000146
ORF1ab/nsp31558P1558LcCgcTg22B.6.60.001778
ORF1ab/nsp31558P1558LcCgcTg22D.20.00015
ORF1ab/nsp31558P1558LcCgcTg22P.1.140.000096
ORF1ab/nsp31558P1558LcCgcTg22P.20.000373
ORF1ab/nsp31558P1558LcCgcTg11A.190.009434
ORF1ab/nsp31558P1558LcCgcTg11A.210.00277
ORF1ab/nsp31558P1558LcCgcTg11AY.1020.000027
ORF1ab/nsp31558P1558LcCgcTg11AY.120.000316
ORF1ab/nsp31558P1558LcCgcTg11AY.200.000039
ORF1ab/nsp31558P1558LcCgcTg11AY.340.000097
ORF1ab/nsp31558P1558LcCgcTg11AY.450.000122
ORF1ab/nsp31558P1558LcCgcTg11AY.590.00053
ORF1ab/nsp31558P1558LcCgcTg11AY.930.000273
ORF1ab/nsp31558P1558LcCgcTg11B.1.1.2320.001815
ORF1ab/nsp31558P1558LcCgcTg11B.1.1.2970.002237
ORF1ab/nsp31558P1558LcCgcTg11B.1.1.3180.000302
ORF1ab/nsp31558P1558LcCgcTg11B.1.1.4040.015873
ORF1ab/nsp31558P1558LcCgcTg11B.1.1.700.000341
ORF1ab/nsp31558P1558LcCgcTg11B.1.1770.000013
ORF1ab/nsp31558P1558LcCgcTg11B.1.177.440.000519
ORF1ab/nsp31558P1558LcCgcTg11B.1.177.450.000381
ORF1ab/nsp31558P1558LcCgcTg11B.1.177.460.000918
ORF1ab/nsp31558P1558LcCgcTg11B.1.177.730.000566
ORF1ab/nsp31558P1558LcCgcTg11B.1.177.810.000189
ORF1ab/nsp31558P1558LcCgcTg11B.1.177.860.000183
ORF1ab/nsp31558P1558LcCgcTg11B.1.2120.016667
ORF1ab/nsp31558P1558LcCgcTg11B.1.2210.000071
ORF1ab/nsp31558P1558LcCgcTg11B.1.4160.001269
ORF1ab/nsp31558P1558LcCgcTg11B.1.4560.003268
ORF1ab/nsp31558P1558LcCgcTg11B.1.4680.005714
ORF1ab/nsp31558P1558LcCgcTg11B.1.5240.001406
ORF1ab/nsp31558P1558LcCgcTg11B.1.5250.000113
ORF1ab/nsp31558P1558LcCgcTg11B.1.6000.005848
ORF1ab/nsp31558P1558LcCgcTg11B.40.002208
ORF1ab/nsp31558P1558LcCgcTg11C.160.00106
ORF1ab/nsp31558P1558LcCgcTg11P.1.120.000484
ORF1ab/nsp31558P1558LcCgcTg11P.1.150.000232