CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1557 & Codon = gTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31557A1557VA2375VnonsyngCcgTc51551517388-7390

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31557A1557VgCcgTc515515All0.000098
ORF1ab/nsp31557A1557VgCcgTc9797AY.700.020225
ORF1ab/nsp31557A1557VgCcgTc9292AY.40.000143
ORF1ab/nsp31557A1557VgCcgTc5454AY.1030.000335
ORF1ab/nsp31557A1557VgCcgTc5454AY.30.000537
ORF1ab/nsp31557A1557VgCcgTc2626B.1.617.20.000098
ORF1ab/nsp31557A1557VgCcgTc1515B.1.1.70.000013
ORF1ab/nsp31557A1557VgCcgTc1212A0.004644
ORF1ab/nsp31557A1557VgCcgTc1212AY.420.000483
ORF1ab/nsp31557A1557VgCcgTc1010B0.001278
ORF1ab/nsp31557A1557VgCcgTc1010B.10.000092
ORF1ab/nsp31557A1557VgCcgTc99AY.440.000055
ORF1ab/nsp31557A1557VgCcgTc99B.1.20.000079
ORF1ab/nsp31557A1557VgCcgTc88AY.430.000035
ORF1ab/nsp31557A1557VgCcgTc77AY.290.00011
ORF1ab/nsp31557A1557VgCcgTc66AY.1190.000212
ORF1ab/nsp31557A1557VgCcgTc66AY.360.000889
ORF1ab/nsp31557A1557VgCcgTc66AY.50.000124
ORF1ab/nsp31557A1557VgCcgTc55AY.250.00003
ORF1ab/nsp31557A1557VgCcgTc44B.1.10.000073
ORF1ab/nsp31557A1557VgCcgTc44B.1.1.5190.000159
ORF1ab/nsp31557A1557VgCcgTc44B.1.177.80.00301
ORF1ab/nsp31557A1557VgCcgTc33AY.1020.00008
ORF1ab/nsp31557A1557VgCcgTc33AY.590.001589
ORF1ab/nsp31557A1557VgCcgTc33B.1.1.3060.001315
ORF1ab/nsp31557A1557VgCcgTc33B.1.1.830.00813
ORF1ab/nsp31557A1557VgCcgTc33B.1.1770.00004
ORF1ab/nsp31557A1557VgCcgTc220.111111
ORF1ab/nsp31557A1557VgCcgTc22AY.200.000078
ORF1ab/nsp31557A1557VgCcgTc22AY.260.000057
ORF1ab/nsp31557A1557VgCcgTc22AY.4.20.000043
ORF1ab/nsp31557A1557VgCcgTc22AY.940.000885
ORF1ab/nsp31557A1557VgCcgTc22B.1.1.280.000622
ORF1ab/nsp31557A1557VgCcgTc22B.1.3110.000549
ORF1ab/nsp31557A1557VgCcgTc22C.36.30.001134
ORF1ab/nsp31557A1557VgCcgTc11A.250.018182
ORF1ab/nsp31557A1557VgCcgTc11AY.1110.000183
ORF1ab/nsp31557A1557VgCcgTc11AY.1170.000085
ORF1ab/nsp31557A1557VgCcgTc11AY.1200.000037
ORF1ab/nsp31557A1557VgCcgTc11AY.160.00038
ORF1ab/nsp31557A1557VgCcgTc11AY.3.10.000085
ORF1ab/nsp31557A1557VgCcgTc11AY.330.000067
ORF1ab/nsp31557A1557VgCcgTc11AY.39.10.00004
ORF1ab/nsp31557A1557VgCcgTc11AY.4.30.000842
ORF1ab/nsp31557A1557VgCcgTc11AY.4.50.000107
ORF1ab/nsp31557A1557VgCcgTc11AY.460.000104
ORF1ab/nsp31557A1557VgCcgTc11AY.46.40.000165
ORF1ab/nsp31557A1557VgCcgTc11AY.46.60.000072
ORF1ab/nsp31557A1557VgCcgTc11AY.690.000187
ORF1ab/nsp31557A1557VgCcgTc11AY.750.000056
ORF1ab/nsp31557A1557VgCcgTc11AY.75.10.00018
ORF1ab/nsp31557A1557VgCcgTc11AY.9.20.000037
ORF1ab/nsp31557A1557VgCcgTc11AY.900.000684
ORF1ab/nsp31557A1557VgCcgTc11AY.910.00073
ORF1ab/nsp31557A1557VgCcgTc11AY.970.001701
ORF1ab/nsp31557A1557VgCcgTc11AY.99.10.001553
ORF1ab/nsp31557A1557VgCcgTc11B.1.1.3690.000446
ORF1ab/nsp31557A1557VgCcgTc11B.1.1600.000031
ORF1ab/nsp31557A1557VgCcgTc11B.1.177.70.000165
ORF1ab/nsp31557A1557VgCcgTc11B.1.2060.000816
ORF1ab/nsp31557A1557VgCcgTc11B.1.2140.003663
ORF1ab/nsp31557A1557VgCcgTc11B.1.2210.000071
ORF1ab/nsp31557A1557VgCcgTc11B.1.3550.011111
ORF1ab/nsp31557A1557VgCcgTc11B.1.36.100.004785
ORF1ab/nsp31557A1557VgCcgTc11B.1.5250.000113
ORF1ab/nsp31557A1557VgCcgTc11B.1.5260.000024
ORF1ab/nsp31557A1557VgCcgTc11B.1.5640.000426
ORF1ab/nsp31557A1557VgCcgTc11B.1.6370.000073
ORF1ab/nsp31557A1557VgCcgTc11P.1.170.000162