CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1546 & Codon = Att

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31546L1546IL2364InonsynCttAtt81800.9876547355-7357

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31546L1546ICttAtt8081All0.000015
ORF1ab/nsp31546L1546ICttAtt5555AY.50.001136
ORF1ab/nsp31546L1546ICttAtt33B.1.1.70.000003
ORF1ab/nsp31546L1546ICttAtt22AY.290.000032
ORF1ab/nsp31546L1546ICttAtt22AY.440.000012
ORF1ab/nsp31546L1546ICttAtt22AY.46.50.000397
ORF1ab/nsp31546L1546ICttAtt22B.10.000018
ORF1ab/nsp31546L1546ICttAtt22B.1.617.20.000008
ORF1ab/nsp31546L1546ICttAtt11AF.10.037037
ORF1ab/nsp31546L1546ICttAtt11AY.1020.000027
ORF1ab/nsp31546L1546ICttAtt11AY.250.000006
ORF1ab/nsp31546L1546ICttAtt11AY.30.00001
ORF1ab/nsp31546L1546ICttAtt11AY.40.000002
ORF1ab/nsp31546L1546ICttAtt11AY.880.000884
ORF1ab/nsp31546L1546ICttAtt11AY.98.10.000048
ORF1ab/nsp31546L1546ICttAtt11B.1.10.000018
ORF1ab/nsp31546L1546ICttAtt11B.1.1.3060.000438
ORF1ab/nsp31546L1546ICttAtt11B.1.1.5190.00004
ORF1ab/nsp31546L1546ICttAtt11B.1.438.10.000107
ORF1ab/nsp31546L1546ICttAtt11B.1.617.10.000129