CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1539 & Codon = caC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31539H1539HH2357HsyncaTcaC33033017334-7336

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31539H1539HcaTcaC330330All0.000063
ORF1ab/nsp31539H1539HcaTcaC199199B.1.258.170.02069
ORF1ab/nsp31539H1539HcaTcaC7474B.1.1.70.000066
ORF1ab/nsp31539H1539HcaTcaC99B.1.617.20.000034
ORF1ab/nsp31539H1539HcaTcaC55AY.40.000008
ORF1ab/nsp31539H1539HcaTcaC55B.1.10.000091
ORF1ab/nsp31539H1539HcaTcaC33AY.440.000018
ORF1ab/nsp31539H1539HcaTcaC33B.1.1.280.000934
ORF1ab/nsp31539H1539HcaTcaC22AY.1030.000012
ORF1ab/nsp31539H1539HcaTcaC22AY.200.000078
ORF1ab/nsp31539H1539HcaTcaC22AY.30.00002
ORF1ab/nsp31539H1539HcaTcaC22AY.330.000134
ORF1ab/nsp31539H1539HcaTcaC22AY.470.000062
ORF1ab/nsp31539H1539HcaTcaC22B.10.000018
ORF1ab/nsp31539H1539HcaTcaC22B.1.1.2140.000111
ORF1ab/nsp31539H1539HcaTcaC22C.36.30.001134
ORF1ab/nsp31539H1539HcaTcaC11AY.100.00053
ORF1ab/nsp31539H1539HcaTcaC11AY.1190.000035
ORF1ab/nsp31539H1539HcaTcaC11AY.390.000025
ORF1ab/nsp31539H1539HcaTcaC11AY.430.000004
ORF1ab/nsp31539H1539HcaTcaC11AY.750.000056
ORF1ab/nsp31539H1539HcaTcaC11AY.99.20.000092
ORF1ab/nsp31539H1539HcaTcaC11B.1.1.2790.001121
ORF1ab/nsp31539H1539HcaTcaC11B.1.1.3720.000689
ORF1ab/nsp31539H1539HcaTcaC11B.1.177.70.000165
ORF1ab/nsp31539H1539HcaTcaC11B.1.177.810.000189
ORF1ab/nsp31539H1539HcaTcaC11B.1.20.000009
ORF1ab/nsp31539H1539HcaTcaC11B.1.3560.001727
ORF1ab/nsp31539H1539HcaTcaC11B.1.36.310.001751
ORF1ab/nsp31539H1539HcaTcaC11B.1.4990.00105
ORF1ab/nsp31539H1539HcaTcaC11D.20.000075
ORF1ab/nsp31539H1539HcaTcaC11Q.80.000165