CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1539 & Codon = caA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31539H1539QH2357QnonsyncaTcaA1580.5333337334-7336

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31539H1539QcaTcaA815All0.000002
ORF1ab/nsp31539H1539QcaTcaA23B.1.617.20.000008
ORF1ab/nsp31539H1539QcaTcaA22AY.30.00002
ORF1ab/nsp31539H1539QcaTcaA22B.1.1.3720.001377
ORF1ab/nsp31539H1539QcaTcaA11AY.1090.00074
ORF1ab/nsp31539H1539QcaTcaA11B.1.5300.007143