CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1528 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31528I1528delI2346deldelATC---14814817301-7303

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31528I1528delATC---148148All0.000028
ORF1ab/nsp31528I1528delATC---3232B.1.1.70.000029
ORF1ab/nsp31528I1528delATC---1414AY.430.000062
ORF1ab/nsp31528I1528delATC---99B.1.617.20.000034
ORF1ab/nsp31528I1528delATC---77AY.250.000042
ORF1ab/nsp31528I1528delATC---55B.10.000046
ORF1ab/nsp31528I1528delATC---55B.1.10.000091
ORF1ab/nsp31528I1528delATC---33AY.40.000005
ORF1ab/nsp31528I1528delATC---33AY.420.000121
ORF1ab/nsp31528I1528delATC---33B.1.617.10.000387
ORF1ab/nsp31528I1528delATC---220.111111
ORF1ab/nsp31528I1528delATC---22AY.120.20.002571
ORF1ab/nsp31528I1528delATC---22AY.46.60.000144
ORF1ab/nsp31528I1528delATC---22AY.50.000041
ORF1ab/nsp31528I1528delATC---22AY.9.20.000073
ORF1ab/nsp31528I1528delATC---22B.1.1770.000026
ORF1ab/nsp31528I1528delATC---22B.1.2580.000133
ORF1ab/nsp31528I1528delATC---22B.1.4110.007407
ORF1ab/nsp31528I1528delATC---22B.1.4970.00063
ORF1ab/nsp31528I1528delATC---22B.1.5250.000226
ORF1ab/nsp31528I1528delATC---22B.1.6280.000705
ORF1ab/nsp31528I1528delATC---11A.280.002646
ORF1ab/nsp31528I1528delATC---11AD.20.000219
ORF1ab/nsp31528I1528delATC---11AY.1010.00049
ORF1ab/nsp31528I1528delATC---11AY.1030.000006
ORF1ab/nsp31528I1528delATC---11AY.1200.000037
ORF1ab/nsp31528I1528delATC---11AY.30.00001
ORF1ab/nsp31528I1528delATC---11AY.330.000067
ORF1ab/nsp31528I1528delATC---11AY.34.10.00051
ORF1ab/nsp31528I1528delATC---11AY.360.000148
ORF1ab/nsp31528I1528delATC---11AY.4.30.000842
ORF1ab/nsp31528I1528delATC---11AY.4.50.000107
ORF1ab/nsp31528I1528delATC---11AY.440.000006
ORF1ab/nsp31528I1528delATC---11AY.660.00107
ORF1ab/nsp31528I1528delATC---11AY.670.000464
ORF1ab/nsp31528I1528delATC---11AY.750.000056
ORF1ab/nsp31528I1528delATC---11AY.760.004831
ORF1ab/nsp31528I1528delATC---11AY.840.000437
ORF1ab/nsp31528I1528delATC---11AY.90.000068
ORF1ab/nsp31528I1528delATC---11B.1.1.1390.022727
ORF1ab/nsp31528I1528delATC---11B.1.1.1590.004673
ORF1ab/nsp31528I1528delATC---11B.1.1.2210.010101
ORF1ab/nsp31528I1528delATC---11B.1.1.3060.000438
ORF1ab/nsp31528I1528delATC---11B.1.1.3540.004386
ORF1ab/nsp31528I1528delATC---11B.1.1.460.004367
ORF1ab/nsp31528I1528delATC---11B.1.1.5190.00004
ORF1ab/nsp31528I1528delATC---11B.1.1150.021739
ORF1ab/nsp31528I1528delATC---11B.1.1600.000031
ORF1ab/nsp31528I1528delATC---11B.1.1610.017241
ORF1ab/nsp31528I1528delATC---11B.1.177.620.001192
ORF1ab/nsp31528I1528delATC---11B.1.20.000009
ORF1ab/nsp31528I1528delATC---11B.1.2100.002132
ORF1ab/nsp31528I1528delATC---11B.1.3510.00003
ORF1ab/nsp31528I1528delATC---11B.1.36.290.000517
ORF1ab/nsp31528I1528delATC---11B.1.4150.014286
ORF1ab/nsp31528I1528delATC---11B.1.416.10.001563
ORF1ab/nsp31528I1528delATC---11B.1.4530.003236
ORF1ab/nsp31528I1528delATC---11B.1.575.10.002439
ORF1ab/nsp31528I1528delATC---11B.1.5950.000261
ORF1ab/nsp31528I1528delATC---11B.1.6210.000089
ORF1ab/nsp31528I1528delATC---11C.350.000774
ORF1ab/nsp31528I1528delATC---11P.10.000016
ORF1ab/nsp31528I1528delATC---11P.1.10.000318
ORF1ab/nsp31528I1528delATC---11P.1.150.000232
ORF1ab/nsp31528I1528delATC---11Q.20.000613
ORF1ab/nsp31528I1528delATC---11Q.80.000165