CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1527 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31527A1527AA2345AsyngcAgcT205690.3365857298-7300

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31527A1527AgcAgcT69205All0.000013
ORF1ab/nsp31527A1527AgcAgcT1142B.1.617.20.000041
ORF1ab/nsp31527A1527AgcAgcT2429AY.40.000037
ORF1ab/nsp31527A1527AgcAgcT321AY.440.000018
ORF1ab/nsp31527A1527AgcAgcT210B.1.1.70.000002
ORF1ab/nsp31527A1527AgcAgcT88AY.1000.000368
ORF1ab/nsp31527A1527AgcAgcT24AY.250.000012
ORF1ab/nsp31527A1527AgcAgcT34P.10.000047
ORF1ab/nsp31527A1527AgcAgcT13AY.30.00001
ORF1ab/nsp31527A1527AgcAgcT33AY.3.10.000256
ORF1ab/nsp31527A1527AgcAgcT12AY.1020.000027
ORF1ab/nsp31527A1527AgcAgcT12AY.430.000004
ORF1ab/nsp31527A1527AgcAgcT22B.1.1.390.001019
ORF1ab/nsp31527A1527AgcAgcT11AY.1180.000063
ORF1ab/nsp31527A1527AgcAgcT11AY.330.000067
ORF1ab/nsp31527A1527AgcAgcT11AY.7.10.000113
ORF1ab/nsp31527A1527AgcAgcT11AY.840.000437
ORF1ab/nsp31527A1527AgcAgcT11AY.9.20.000037
ORF1ab/nsp31527A1527AgcAgcT11B.1.1600.000031
ORF1ab/nsp31527A1527AgcAgcT11B.1.2340.000132
ORF1ab/nsp31527A1527AgcAgcT11D.20.000075