CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1526

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31526A1526TA2344TnonsynGctAct216421590.9976897295-7297
ORF1ab/nsp31526A1526TA2344TnonsynGcTAcA216450.002310547295-7297
ORF1ab/nsp31526A1526VA2344VnonsyngCtgTt176217610.9994327295-7297
ORF1ab/nsp31526A1526VA2344VnonsyngCTgTA176210.0005675377295-7297
ORF1ab/nsp31526A1526SA2344SnonsynGctTct4934910.9959437295-7297
ORF1ab/nsp31526A1526SA2344SnonsynGcTTcG49310.00202847295-7297
ORF1ab/nsp31526A1526SA2344SnonsynGCtAGt49310.00202847295-7297
ORF1ab/nsp31526A1526AA2344AsyngcTgcC2501710.6847295-7297
ORF1ab/nsp31526A1526AA2344AsyngcTgcA250660.2647295-7297
ORF1ab/nsp31526A1526AA2344AsyngcTgcG250130.0527295-7297
ORF1ab/nsp31526A1526delA2344deldelGCT---13313317295-7297
ORF1ab/nsp31526A1526PA2344PnonsynGctCct6617295-7297
ORF1ab/nsp31526A1526del1A2344del1delgcTgc-640.6666677295-7297
ORF1ab/nsp31526A1526GA2344GnonsyngCtgGt640.6666677295-7297
ORF1ab/nsp31526A1526del1A2344del1delgCtg-t620.3333337295-7297
ORF1ab/nsp31526A1526GA2344GnonsyngCTgGA610.1666677295-7297
ORF1ab/nsp31526A1526GA2344GnonsyngCTgGC610.1666677295-7297
ORF1ab/nsp31526A1526DA2344DnonsyngCtgAt5517295-7297
ORF1ab/nsp31526A1526NA2344NnonsynGCTAAC2217295-7297
ORF1ab/nsp31526A1526del2A2344del2delGCT--N1117295-7297
ORF1ab/nsp31526A1526MA2344MnonsynGCTATG1117295-7297
ORF1ab/nsp31526A1526KA2344KnonsynGCTAAA1117295-7297
ORF1ab/nsp31526A1526IA2344InonsynGCtATt1117295-7297
ORF1ab/nsp31526A1526FA2344FnonsynGCtTTt1117295-7297

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31526A1526TGctAct21592164All0.000413
ORF1ab/nsp31526A1526TGcTAcA52164All0.000001
ORF1ab/nsp31526A1526VgCtgTt17611762All0.000337
ORF1ab/nsp31526A1526VgCTgTA11762All0
ORF1ab/nsp31526A1526TGctAct16631663B.1.1.70.001489
ORF1ab/nsp31526A1526SGctTct491493All0.000094
ORF1ab/nsp31526A1526SGCtAGt1493All0
ORF1ab/nsp31526A1526SGcTTcG1493All0
ORF1ab/nsp31526A1526VgCtgTt421421AY.30.004187
ORF1ab/nsp31526A1526VgCtgTt299299B.1.617.30.892537
ORF1ab/nsp31526A1526AgcTgcC171250All0.000033
ORF1ab/nsp31526A1526AgcTgcA66250All0.000013
ORF1ab/nsp31526A1526AgcTgcG13250All0.000002
ORF1ab/nsp31526A1526SGctTct157157AY.1000.007223
ORF1ab/nsp31526A1526SGctTct157157B.1.617.20.000591
ORF1ab/nsp31526A1526TGctAct134134B.1.4290.003153
ORF1ab/nsp31526A1526delGCT---133133All0.000025
ORF1ab/nsp31526A1526VgCtgTt105105B.1.1.70.000094
ORF1ab/nsp31526A1526TGctAct8383B.1.1.5180.525316
ORF1ab/nsp31526A1526VgCtgTt6969B.1.2340.009104
ORF1ab/nsp31526A1526VgCtgTt6565B.1.243.20.942029
ORF1ab/nsp31526A1526VgCtgTt6464B.1.617.20.000241
ORF1ab/nsp31526A1526TGctAct6161AY.40.000095
ORF1ab/nsp31526A1526VgCtgTt5959AY.330.00394
ORF1ab/nsp31526A1526VgCtgTt5757B.1.1.5190.002264
ORF1ab/nsp31526A1526VgCtgTt4141AY.40.000064
ORF1ab/nsp31526A1526VgCtgTt3939B.1.10.000707
ORF1ab/nsp31526A1526VgCtgTt3939B.1.1.3730.928571
ORF1ab/nsp31526A1526VgCtgTt3737B.10.000339
ORF1ab/nsp31526A1526SGctTct3737B.1.1150.804348
ORF1ab/nsp31526A1526VgCtgTt3434AY.1020.000901
ORF1ab/nsp31526A1526AgcTgcC3434AY.200.001321
ORF1ab/nsp31526A1526AgcTgcC1531B.1.1.70.000013
ORF1ab/nsp31526A1526AgcTgcA1031B.1.1.70.000009
ORF1ab/nsp31526A1526AgcTgcG631B.1.1.70.000005
ORF1ab/nsp31526A1526delGCT---2828B.1.1.70.000025
ORF1ab/nsp31526A1526TGctAct2626AY.1180.001629
ORF1ab/nsp31526A1526VgCtgTt2626AY.430.000115
ORF1ab/nsp31526A1526VgCtgTt2626B.1.214.20.015588
ORF1ab/nsp31526A1526AgcTgcC2222AY.1000.001012
ORF1ab/nsp31526A1526TGctAct2121AY.440.000128
ORF1ab/nsp31526A1526TGctAct2121B.1.1.4200.021127
ORF1ab/nsp31526A1526AgcTgcC1621B.1.617.20.00006
ORF1ab/nsp31526A1526AgcTgcA521B.1.617.20.000019
ORF1ab/nsp31526A1526AgcTgcC2020B.1.1600.000624
ORF1ab/nsp31526A1526VgCtgTt2020B.1.5960.001743
ORF1ab/nsp31526A1526SGctTct1616AY.440.000097
ORF1ab/nsp31526A1526VgCtgTt1616B.1.2210.001137
ORF1ab/nsp31526A1526VgCtgTt1515AY.200.000583
ORF1ab/nsp31526A1526SGctTct1515B.1.1.70.000013
ORF1ab/nsp31526A1526VgCtgTt1414B.1.1650.166667
ORF1ab/nsp31526A1526VgCtgTt1313B.1.177.600.00284
ORF1ab/nsp31526A1526SGctTct1212AY.40.000019
ORF1ab/nsp31526A1526TGctAct1212B.10.00011
ORF1ab/nsp31526A1526VgCtgTt1212B.1.5260.000282
ORF1ab/nsp31526A1526TGctAct1212B.1.617.20.000045
ORF1ab/nsp31526A1526TGctAct1212Q.80.001979
ORF1ab/nsp31526A1526VgCtgTt1111AY.1210.001488
ORF1ab/nsp31526A1526delGCT---1111AY.430.000049
ORF1ab/nsp31526A1526VgCtgTt1111B.1.1.4220.5
ORF1ab/nsp31526A1526VgCtgTt1111B.1.20.000097
ORF1ab/nsp31526A1526VgCtgTt1010AY.140.00088
ORF1ab/nsp31526A1526VgCtgTt1010AY.440.000061
ORF1ab/nsp31526A1526AgcTgcA910B.1.1770.000119
ORF1ab/nsp31526A1526AgcTgcC110B.1.1770.000013
ORF1ab/nsp31526A1526SGctTct1010B.1.2340.001319
ORF1ab/nsp31526A1526delGCT---1010B.1.617.20.000038
ORF1ab/nsp31526A1526VgCtgTt1010B.1.6390.217391
ORF1ab/nsp31526A1526VgCtgTt99AY.260.000255
ORF1ab/nsp31526A1526TGctAct99AY.30.00009
ORF1ab/nsp31526A1526VgCtgTt99AY.390.000222
ORF1ab/nsp31526A1526AgcTgcC79AY.440.000043
ORF1ab/nsp31526A1526AgcTgcA29AY.440.000012
ORF1ab/nsp31526A1526VgCtgTt99AY.60.00037
ORF1ab/nsp31526A1526AgcTgcC99AY.7.10.001014
ORF1ab/nsp31526A1526SGctTct99B.10.000082
ORF1ab/nsp31526A1526VgCtgTt99B.1.1770.000119
ORF1ab/nsp31526A1526AgcTgcA88A.23.10.005634
ORF1ab/nsp31526A1526TGctAct88B.1.2430.000557
ORF1ab/nsp31526A1526SGctTct77AY.1020.000186
ORF1ab/nsp31526A1526SGctTct77AY.790.008475
ORF1ab/nsp31526A1526VgCtgTt77AY.930.001912
ORF1ab/nsp31526A1526TGctAct77B.1.20.000062
ORF1ab/nsp31526A1526PGctCct66All0.000001
ORF1ab/nsp31526A1526del1gcTgc-46All0.000001
ORF1ab/nsp31526A1526GgCtgGt46All0.000001
ORF1ab/nsp31526A1526del1gCtg-t26All0
ORF1ab/nsp31526A1526GgCTgGC16All0
ORF1ab/nsp31526A1526GgCTgGA16All0
ORF1ab/nsp31526A1526AgcTgcC56AY.1030.000031
ORF1ab/nsp31526A1526AgcTgcA16AY.1030.000006
ORF1ab/nsp31526A1526VgCtgTt66AY.470.000187
ORF1ab/nsp31526A1526TGctAct66AY.60.000247
ORF1ab/nsp31526A1526delGCT---66B.1.10.000109
ORF1ab/nsp31526A1526AgcTgcA66B.1.466.20.002347
ORF1ab/nsp31526A1526VgCtgTt66B.1.5950.001566
ORF1ab/nsp31526A1526SGctTct66C.10.014354
ORF1ab/nsp31526A1526VgCtgTt66C.370.000696
ORF1ab/nsp31526A1526TGcTAcA56P.1.160.001871
ORF1ab/nsp31526A1526TGctAct16P.1.160.000374
ORF1ab/nsp31526A1526DgCtgAt55All0.000001
ORF1ab/nsp31526A1526SGctTct55AY.1030.000031
ORF1ab/nsp31526A1526VgCtgTt55AY.1030.000031
ORF1ab/nsp31526A1526VgCtgTt55AY.230.000349
ORF1ab/nsp31526A1526VgCtgTt55AY.250.00003
ORF1ab/nsp31526A1526AgcTgcC45AY.40.000006
ORF1ab/nsp31526A1526AgcTgcG15AY.40.000002
ORF1ab/nsp31526A1526VgCtgTt55AY.610.000524
ORF1ab/nsp31526A1526VgCtgTt55AY.9.20.000184
ORF1ab/nsp31526A1526delGCT---55B.10.000046
ORF1ab/nsp31526A1526TGctAct55B.1.1770.000066
ORF1ab/nsp31526A1526AgcTgcC35B.1.20.000026
ORF1ab/nsp31526A1526AgcTgcA25B.1.20.000018
ORF1ab/nsp31526A1526VgCtgTt55P.10.000079
ORF1ab/nsp31526A1526TGctAct55P.50.068493
ORF1ab/nsp31526A1526delGCT---440.222222
ORF1ab/nsp31526A1526TGctAct44AD.2.10.181818
ORF1ab/nsp31526A1526TGctAct44AY.1020.000106
ORF1ab/nsp31526A1526VgCtgTt44AY.1170.000338
ORF1ab/nsp31526A1526VgCtgTt44AY.1190.000141
ORF1ab/nsp31526A1526VgCtgTt44AY.1200.000149
ORF1ab/nsp31526A1526SGctTct44AY.230.000279
ORF1ab/nsp31526A1526VgCtgTt44AY.320.00213
ORF1ab/nsp31526A1526AgcTgcC34AY.4.20.000065
ORF1ab/nsp31526A1526AgcTgcG14AY.4.20.000022
ORF1ab/nsp31526A1526SGctTct44AY.420.000161
ORF1ab/nsp31526A1526TGctAct44AY.470.000124
ORF1ab/nsp31526A1526AgcTgcC24B.10.000018
ORF1ab/nsp31526A1526AgcTgcG24B.10.000018
ORF1ab/nsp31526A1526VgCtgTt44B.1.1.1920.009238
ORF1ab/nsp31526A1526VgCtgTt44B.1.2400.000862
ORF1ab/nsp31526A1526VgCtgTt44B.1.5510.005161
ORF1ab/nsp31526A1526TGctAct33AY.1000.000138
ORF1ab/nsp31526A1526AgcTgcC23AY.1170.000169
ORF1ab/nsp31526A1526AgcTgcA13AY.1170.000085
ORF1ab/nsp31526A1526delGCT---33AY.250.000018
ORF1ab/nsp31526A1526TGctAct33AY.250.000018
ORF1ab/nsp31526A1526SGctTct33AY.30.00003
ORF1ab/nsp31526A1526AgcTgcC33AY.390.000074
ORF1ab/nsp31526A1526delGCT---33AY.40.000005
ORF1ab/nsp31526A1526AgcTgcC33AY.4.2.10.000447
ORF1ab/nsp31526A1526delGCT---33AY.420.000121
ORF1ab/nsp31526A1526TGctAct33AY.430.000013
ORF1ab/nsp31526A1526AgcTgcG23AY.430.000009
ORF1ab/nsp31526A1526AgcTgcA13AY.430.000004
ORF1ab/nsp31526A1526delGCT---33AY.440.000018
ORF1ab/nsp31526A1526VgCtgTt33AY.750.000168
ORF1ab/nsp31526A1526TGctAct33AY.98.10.000145
ORF1ab/nsp31526A1526TGctAct33B.1.10.000054
ORF1ab/nsp31526A1526VgCtgTt33B.1.1.2140.000166
ORF1ab/nsp31526A1526TGctAct33B.1.1.2160.002671
ORF1ab/nsp31526A1526VgCtgTt33B.1.1.3060.001315
ORF1ab/nsp31526A1526TGctAct33B.1.1.5190.000119
ORF1ab/nsp31526A1526TGctAct33B.1.2580.0002
ORF1ab/nsp31526A1526VgCtgTt33B.1.36.290.001552
ORF1ab/nsp31526A1526TGctAct33B.1.4160.003807
ORF1ab/nsp31526A1526SGctTct33B.40.006623
ORF1ab/nsp31526A1526VgCtgTt33D.20.000225
ORF1ab/nsp31526A1526TGctAct33P.20.00056
ORF1ab/nsp31526A1526del1gcTgc-220.111111
ORF1ab/nsp31526A1526GgCtgGt220.111111
ORF1ab/nsp31526A1526VgCtgTt120.055556
ORF1ab/nsp31526A1526VgCTgTA120.055556
ORF1ab/nsp31526A1526NGCTAAC22All0
ORF1ab/nsp31526A1526VgCtgTt22AY.1000.000092
ORF1ab/nsp31526A1526VgCtgTt22AY.1180.000125
ORF1ab/nsp31526A1526TGctAct22AY.1190.000071
ORF1ab/nsp31526A1526delGCT---22AY.120.20.002571
ORF1ab/nsp31526A1526VgCtgTt22AY.280.003781
ORF1ab/nsp31526A1526VgCtgTt22AY.290.000032
ORF1ab/nsp31526A1526AgcTgcA22AY.330.000134
ORF1ab/nsp31526A1526TGctAct22AY.370.000632
ORF1ab/nsp31526A1526VgCtgTt22AY.39.10.000079
ORF1ab/nsp31526A1526PGctCct22AY.40.000003
ORF1ab/nsp31526A1526del1gcTgc-22AY.430.000009
ORF1ab/nsp31526A1526VgCtgTt22AY.46.60.000144
ORF1ab/nsp31526A1526VgCtgTt22AY.5.30.000675
ORF1ab/nsp31526A1526VgCtgTt22AY.590.001059
ORF1ab/nsp31526A1526TGctAct22AY.640.00119
ORF1ab/nsp31526A1526AgcTgcC22AY.660.002139
ORF1ab/nsp31526A1526VgCtgTt22AY.720.002721
ORF1ab/nsp31526A1526VgCtgTt22AY.840.000875
ORF1ab/nsp31526A1526SGctTct22AY.890.009804
ORF1ab/nsp31526A1526DgCtgAt22B.10.000018
ORF1ab/nsp31526A1526GgCtgGt12B.10.000009
ORF1ab/nsp31526A1526GgCTgGC12B.10.000009
ORF1ab/nsp31526A1526SGctTct12B.1.10.000018
ORF1ab/nsp31526A1526SGCtAGt12B.1.10.000018
ORF1ab/nsp31526A1526AgcTgcC22B.1.1.2220.000408
ORF1ab/nsp31526A1526VgCtgTt22B.1.1.2530.005013
ORF1ab/nsp31526A1526VgCtgTt22B.1.1.330.000842
ORF1ab/nsp31526A1526VgCtgTt22B.1.1.3980.006452
ORF1ab/nsp31526A1526VgCtgTt22B.1.1.4340.000697
ORF1ab/nsp31526A1526TGctAct22B.1.1150.043478
ORF1ab/nsp31526A1526VgCtgTt22B.1.1600.000062
ORF1ab/nsp31526A1526delGCT---22B.1.1770.000026
ORF1ab/nsp31526A1526SGctTct22B.1.20.000018
ORF1ab/nsp31526A1526TGctAct22B.1.2400.000431
ORF1ab/nsp31526A1526AgcTgcA22B.1.2580.000133
ORF1ab/nsp31526A1526AgcTgcC22B.1.2700.011236
ORF1ab/nsp31526A1526SGctTct22B.1.3110.000549
ORF1ab/nsp31526A1526VgCtgTt22B.1.3510.000059
ORF1ab/nsp31526A1526VgCtgTt22B.1.36.190.018519
ORF1ab/nsp31526A1526delGCT---22B.1.4110.007407
ORF1ab/nsp31526A1526AgcTgcC12B.1.4270.00005
ORF1ab/nsp31526A1526AgcTgcA12B.1.4270.00005
ORF1ab/nsp31526A1526VgCtgTt22B.1.428.30.025641
ORF1ab/nsp31526A1526VgCtgTt22B.1.466.20.000782
ORF1ab/nsp31526A1526delGCT---22B.1.4970.00063
ORF1ab/nsp31526A1526VgCtgTt22B.1.617.10.000258
ORF1ab/nsp31526A1526delGCT---22B.1.617.10.000258
ORF1ab/nsp31526A1526NGCTAAC22B.1.617.20.000008
ORF1ab/nsp31526A1526VgCtgTt22C.140.008658
ORF1ab/nsp31526A1526SGctTct22C.360.001821
ORF1ab/nsp31526A1526TGctAct22P.10.000032
ORF1ab/nsp31526A1526delGCT---22P.10.000032
ORF1ab/nsp31526A1526VgCtgTt22P.1.10.000635
ORF1ab/nsp31526A1526VgCtgTt22R.10.00018
ORF1ab/nsp31526A1526AgcTgcA110.055556
ORF1ab/nsp31526A1526TGctAct11A0.000387
ORF1ab/nsp31526A1526SGctTct11A.20.000662
ORF1ab/nsp31526A1526VgCtgTt11A.20.000662
ORF1ab/nsp31526A1526SGctTct11A.2.20.001689
ORF1ab/nsp31526A1526delGCT---11A.280.002646
ORF1ab/nsp31526A1526delGCT---11AD.20.000219
ORF1ab/nsp31526A1526MGCTATG11All0
ORF1ab/nsp31526A1526del2GCT--N11All0
ORF1ab/nsp31526A1526IGCtATt11All0
ORF1ab/nsp31526A1526KGCTAAA11All0
ORF1ab/nsp31526A1526FGCtTTt11All0
ORF1ab/nsp31526A1526delGCT---11AY.1010.00049
ORF1ab/nsp31526A1526TGctAct11AY.1030.000006
ORF1ab/nsp31526A1526delGCT---11AY.1030.000006
ORF1ab/nsp31526A1526AgcTgcC11AY.1060.000335
ORF1ab/nsp31526A1526VgCtgTt11AY.1070.000466
ORF1ab/nsp31526A1526AgcTgcC11AY.1110.000183
ORF1ab/nsp31526A1526AgcTgcA11AY.1130.000142
ORF1ab/nsp31526A1526GgCTgGA11AY.1130.000142
ORF1ab/nsp31526A1526SGctTct11AY.1190.000035
ORF1ab/nsp31526A1526AgcTgcA11AY.1190.000035
ORF1ab/nsp31526A1526IGCtATt11AY.1200.000037
ORF1ab/nsp31526A1526AgcTgcC11AY.1200.000037
ORF1ab/nsp31526A1526delGCT---11AY.1200.000037
ORF1ab/nsp31526A1526SGctTct11AY.120.10.000321
ORF1ab/nsp31526A1526VgCtgTt11AY.120.10.000321
ORF1ab/nsp31526A1526SGctTct11AY.140.000088
ORF1ab/nsp31526A1526VgCtgTt11AY.16.10.00047
ORF1ab/nsp31526A1526SGctTct11AY.250.000006
ORF1ab/nsp31526A1526AgcTgcA11AY.260.000028
ORF1ab/nsp31526A1526AgcTgcA11AY.270.000065
ORF1ab/nsp31526A1526AgcTgcC11AY.290.000016
ORF1ab/nsp31526A1526SGctTct11AY.290.000016
ORF1ab/nsp31526A1526delGCT---11AY.30.00001
ORF1ab/nsp31526A1526AgcTgcC11AY.30.00001
ORF1ab/nsp31526A1526SGctTct11AY.3.10.000085
ORF1ab/nsp31526A1526TGctAct11AY.300.000396
ORF1ab/nsp31526A1526SGctTct11AY.330.000067
ORF1ab/nsp31526A1526delGCT---11AY.330.000067
ORF1ab/nsp31526A1526VgCtgTt11AY.340.000097
ORF1ab/nsp31526A1526delGCT---11AY.34.10.00051
ORF1ab/nsp31526A1526delGCT---11AY.360.000148
ORF1ab/nsp31526A1526SGctTct11AY.360.000148
ORF1ab/nsp31526A1526TGctAct11AY.360.000148
ORF1ab/nsp31526A1526VgCtgTt11AY.380.000499
ORF1ab/nsp31526A1526SGctTct11AY.390.000025
ORF1ab/nsp31526A1526delGCT---11AY.4.30.000842
ORF1ab/nsp31526A1526VgCtgTt11AY.4.30.000842
ORF1ab/nsp31526A1526delGCT---11AY.4.50.000107
ORF1ab/nsp31526A1526AgcTgcC11AY.420.00004
ORF1ab/nsp31526A1526TGctAct11AY.420.00004
ORF1ab/nsp31526A1526DgCtgAt11AY.430.000004
ORF1ab/nsp31526A1526VgCtgTt11AY.450.000122
ORF1ab/nsp31526A1526AgcTgcA11AY.460.000104
ORF1ab/nsp31526A1526VgCtgTt11AY.46.10.001027
ORF1ab/nsp31526A1526TGctAct11AY.46.40.000165
ORF1ab/nsp31526A1526PGctCct11AY.46.50.000198
ORF1ab/nsp31526A1526delGCT---11AY.46.60.000072
ORF1ab/nsp31526A1526AgcTgcA11AY.50.000021
ORF1ab/nsp31526A1526delGCT---11AY.50.000021
ORF1ab/nsp31526A1526VgCtgTt11AY.5.20.002463
ORF1ab/nsp31526A1526TGctAct11AY.5.30.000337
ORF1ab/nsp31526A1526VgCtgTt11AY.540.000095
ORF1ab/nsp31526A1526VgCtgTt11AY.550.000917
ORF1ab/nsp31526A1526VgCtgTt11AY.580.000907
ORF1ab/nsp31526A1526TGctAct11AY.630.000387
ORF1ab/nsp31526A1526SGctTct11AY.640.000595
ORF1ab/nsp31526A1526delGCT---11AY.660.00107
ORF1ab/nsp31526A1526GgCtgGt11AY.670.000464
ORF1ab/nsp31526A1526AgcTgcA11AY.670.000464
ORF1ab/nsp31526A1526delGCT---11AY.670.000464
ORF1ab/nsp31526A1526AgcTgcA11AY.680.000274
ORF1ab/nsp31526A1526SGctTct11AY.690.000187
ORF1ab/nsp31526A1526VgCtgTt11AY.740.000116
ORF1ab/nsp31526A1526delGCT---11AY.750.000056
ORF1ab/nsp31526A1526SGctTct11AY.750.000056
ORF1ab/nsp31526A1526delGCT---11AY.760.004831
ORF1ab/nsp31526A1526AgcTgcC11AY.840.000437
ORF1ab/nsp31526A1526delGCT---11AY.840.000437
ORF1ab/nsp31526A1526delGCT---11AY.90.000068
ORF1ab/nsp31526A1526SGctTct11AY.9.20.000037
ORF1ab/nsp31526A1526delGCT---11AY.9.20.000037
ORF1ab/nsp31526A1526VgCtgTt11AY.920.000287
ORF1ab/nsp31526A1526VgCtgTt11AY.980.000079
ORF1ab/nsp31526A1526VgCtgTt11AY.98.10.000048
ORF1ab/nsp31526A1526AgcTgcA11AY.98.10.000048
ORF1ab/nsp31526A1526SGcTTcG11AY.990.001049
ORF1ab/nsp31526A1526TGctAct11AY.99.10.001553
ORF1ab/nsp31526A1526AgcTgcA11B0.000128
ORF1ab/nsp31526A1526PGctCct11B.10.000009
ORF1ab/nsp31526A1526FGCtTTt11B.10.000009
ORF1ab/nsp31526A1526AgcTgcC11B.1.10.000018
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.10.000327
ORF1ab/nsp31526A1526delGCT---11B.1.1.1590.004673
ORF1ab/nsp31526A1526delGCT---11B.1.1.2210.010101
ORF1ab/nsp31526A1526PGctCct11B.1.1.2220.000204
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.2740.005051
ORF1ab/nsp31526A1526AgcTgcA11B.1.1.280.000311
ORF1ab/nsp31526A1526AgcTgcC11B.1.1.2840.000107
ORF1ab/nsp31526A1526delGCT---11B.1.1.3060.000438
ORF1ab/nsp31526A1526TGctAct11B.1.1.3170.000412
ORF1ab/nsp31526A1526AgcTgcA11B.1.1.3260.001761
ORF1ab/nsp31526A1526AgcTgcA11B.1.1.330.000421
ORF1ab/nsp31526A1526delGCT---11B.1.1.3540.004386
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.3850.004464
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.3970.002252
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.4090.002833
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.4140.142857
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.4520.111111
ORF1ab/nsp31526A1526delGCT---11B.1.1.460.004367
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.4850.016667
ORF1ab/nsp31526A1526delGCT---11B.1.1.5190.00004
ORF1ab/nsp31526A1526VgCtgTt11B.1.1.630.000386
ORF1ab/nsp31526A1526delGCT---11B.1.1150.021739
ORF1ab/nsp31526A1526VgCtgTt11B.1.1340.005464
ORF1ab/nsp31526A1526VgCtgTt11B.1.1390.000733
ORF1ab/nsp31526A1526delGCT---11B.1.1600.000031
ORF1ab/nsp31526A1526SGctTct11B.1.1600.000031
ORF1ab/nsp31526A1526AgcTgcC11B.1.160.140.002119
ORF1ab/nsp31526A1526VgCtgTt11B.1.160.260.002421
ORF1ab/nsp31526A1526VgCtgTt11B.1.1610.017241
ORF1ab/nsp31526A1526SGctTct11B.1.1670.007812
ORF1ab/nsp31526A1526PGctCct11B.1.177.170.000821
ORF1ab/nsp31526A1526delGCT---11B.1.177.620.001192
ORF1ab/nsp31526A1526delGCT---11B.1.20.000009
ORF1ab/nsp31526A1526delGCT---11B.1.2100.002132
ORF1ab/nsp31526A1526TGctAct11B.1.2150.009615
ORF1ab/nsp31526A1526DgCtgAt11B.1.2210.000071
ORF1ab/nsp31526A1526TGctAct11B.1.2340.000132
ORF1ab/nsp31526A1526AgcTgcC11B.1.2430.00007
ORF1ab/nsp31526A1526VgCtgTt11B.1.2470.014925
ORF1ab/nsp31526A1526delGCT---11B.1.2580.000067
ORF1ab/nsp31526A1526DgCtgAt11B.1.2580.000067
ORF1ab/nsp31526A1526SGctTct11B.1.2580.000067
ORF1ab/nsp31526A1526VgCtgTt11B.1.258.160.001637
ORF1ab/nsp31526A1526VgCtgTt11B.1.3110.000275
ORF1ab/nsp31526A1526AgcTgcA11B.1.3340.018182
ORF1ab/nsp31526A1526delGCT---11B.1.3510.00003
ORF1ab/nsp31526A1526TGctAct11B.1.3510.00003
ORF1ab/nsp31526A1526SGctTct11B.1.3510.00003
ORF1ab/nsp31526A1526AgcTgcC11B.1.351.20.000303
ORF1ab/nsp31526A1526TGctAct11B.1.351.20.000303
ORF1ab/nsp31526A1526VgCtgTt11B.1.360.000146
ORF1ab/nsp31526A1526VgCtgTt11B.1.36.310.001751
ORF1ab/nsp31526A1526SGctTct11B.1.3620.001541
ORF1ab/nsp31526A1526SGctTct11B.1.3690.000285
ORF1ab/nsp31526A1526VgCtgTt11B.1.3690.000285
ORF1ab/nsp31526A1526TGctAct11B.1.4000.000429
ORF1ab/nsp31526A1526TGctAct11B.1.4090.000781
ORF1ab/nsp31526A1526delGCT---11B.1.4150.014286
ORF1ab/nsp31526A1526delGCT---11B.1.416.10.001563
ORF1ab/nsp31526A1526VgCtgTt11B.1.4270.00005
ORF1ab/nsp31526A1526SGctTct11B.1.4270.00005
ORF1ab/nsp31526A1526SGctTct11B.1.4290.000024
ORF1ab/nsp31526A1526AgcTgcC11B.1.4290.000024
ORF1ab/nsp31526A1526delGCT---11B.1.4530.003236
ORF1ab/nsp31526A1526VgCtgTt11B.1.4590.004082
ORF1ab/nsp31526A1526VgCtgTt11B.1.4660.023256
ORF1ab/nsp31526A1526TGctAct11B.1.466.20.000391
ORF1ab/nsp31526A1526VgCtgTt11B.1.4740.001901
ORF1ab/nsp31526A1526delGCT---11B.1.5250.000113
ORF1ab/nsp31526A1526del2GCT--N11B.1.5260.000024
ORF1ab/nsp31526A1526delGCT---11B.1.5260.000024
ORF1ab/nsp31526A1526VgCtgTt11B.1.5610.000397
ORF1ab/nsp31526A1526VgCtgTt11B.1.5700.002941
ORF1ab/nsp31526A1526delGCT---11B.1.575.10.002439
ORF1ab/nsp31526A1526AgcTgcC11B.1.5760.000907
ORF1ab/nsp31526A1526SGctTct11B.1.5900.004545
ORF1ab/nsp31526A1526delGCT---11B.1.5950.000261
ORF1ab/nsp31526A1526TGctAct11B.1.6090.000479
ORF1ab/nsp31526A1526MGCTATG11B.1.617.20.000004
ORF1ab/nsp31526A1526KGCTAAA11B.1.617.20.000004
ORF1ab/nsp31526A1526del1gCtg-t11B.1.617.30.002985
ORF1ab/nsp31526A1526AgcTgcG11B.1.619.10.000641
ORF1ab/nsp31526A1526del1gCtg-t11B.1.619.10.000641
ORF1ab/nsp31526A1526VgCtgTt11B.1.6200.000946
ORF1ab/nsp31526A1526delGCT---11B.1.6210.000089
ORF1ab/nsp31526A1526SGctTct11B.1.6230.000536
ORF1ab/nsp31526A1526delGCT---11B.1.6280.000352
ORF1ab/nsp31526A1526VgCtgTt11B.30.000831
ORF1ab/nsp31526A1526VgCtgTt11C.1.10.076923
ORF1ab/nsp31526A1526delGCT---11C.350.000774
ORF1ab/nsp31526A1526SGctTct11C.370.000116
ORF1ab/nsp31526A1526AgcTgcC11D.20.000075
ORF1ab/nsp31526A1526SGctTct11D.20.000075
ORF1ab/nsp31526A1526TGctAct11P.1.110.010204
ORF1ab/nsp31526A1526SGctTct11P.1.150.000232
ORF1ab/nsp31526A1526delGCT---11P.1.150.000232
ORF1ab/nsp31526A1526SGctTct11P.30.001595
ORF1ab/nsp31526A1526AgcTgcA11P.60.003145
ORF1ab/nsp31526A1526VgCtgTt11Q.30.000145
ORF1ab/nsp31526A1526delGCT---11Q.80.000165
ORF1ab/nsp31526A1526SGctTct11Q.80.000165