CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1525 & Codon = ttT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31525L1525FL2343FnonsynttGttT2021970.9752487292-7294

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31525L1525FttGttT197202All0.000038
ORF1ab/nsp31525L1525FttGttT5757AY.98.10.002761
ORF1ab/nsp31525L1525FttGttT3131AY.700.006464
ORF1ab/nsp31525L1525FttGttT1515AY.99.20.001382
ORF1ab/nsp31525L1525FttGttT810B.10.000073
ORF1ab/nsp31525L1525FttGttT910B.1.1.70.000008
ORF1ab/nsp31525L1525FttGttT1010B.1.1770.000132
ORF1ab/nsp31525L1525FttGttT88B.1.214.20.004796
ORF1ab/nsp31525L1525FttGttT77P.10.00011
ORF1ab/nsp31525L1525FttGttT45B.1.20.000035
ORF1ab/nsp31525L1525FttGttT44B.1.617.20.000015
ORF1ab/nsp31525L1525FttGttT33AY.260.000085
ORF1ab/nsp31525L1525FttGttT33AY.40.000005
ORF1ab/nsp31525L1525FttGttT33AY.430.000013
ORF1ab/nsp31525L1525FttGttT33B.1.1.2840.000322
ORF1ab/nsp31525L1525FttGttT33B.1.1600.000094
ORF1ab/nsp31525L1525FttGttT22AY.1030.000012
ORF1ab/nsp31525L1525FttGttT22AY.440.000012
ORF1ab/nsp31525L1525FttGttT22AY.920.000575
ORF1ab/nsp31525L1525FttGttT12B.1.10.000018
ORF1ab/nsp31525L1525FttGttT110.055556
ORF1ab/nsp31525L1525FttGttT11AY.1020.000027
ORF1ab/nsp31525L1525FttGttT11AY.1190.000035
ORF1ab/nsp31525L1525FttGttT11AY.120.20.001285
ORF1ab/nsp31525L1525FttGttT11AY.240.000431
ORF1ab/nsp31525L1525FttGttT11AY.390.000025
ORF1ab/nsp31525L1525FttGttT11AY.4.20.000022
ORF1ab/nsp31525L1525FttGttT11AY.4.30.000842
ORF1ab/nsp31525L1525FttGttT11AY.470.000031
ORF1ab/nsp31525L1525FttGttT11AY.980.000079
ORF1ab/nsp31525L1525FttGttT11B.1.1.2790.001121
ORF1ab/nsp31525L1525FttGttT11B.1.1.280.000311
ORF1ab/nsp31525L1525FttGttT11B.1.1610.017241
ORF1ab/nsp31525L1525FttGttT11B.1.177.520.001757
ORF1ab/nsp31525L1525FttGttT11B.1.2370.004975
ORF1ab/nsp31525L1525FttGttT11B.1.3510.00003
ORF1ab/nsp31525L1525FttGttT11B.1.4270.00005
ORF1ab/nsp31525L1525FttGttT11B.1.4290.000024
ORF1ab/nsp31525L1525FttGttT11B.1.5640.000426
ORF1ab/nsp31525L1525FttGttT11B.1.5950.000261
ORF1ab/nsp31525L1525FttGttT11B.1.617.10.000129
ORF1ab/nsp31525L1525FttGttT11P.1.10.000318