CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1525 & Codon = ttA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31525L1525LL2343LsynttGttA27855090.1827657292-7294

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31525L1525LttGttA5092785All0.000097
ORF1ab/nsp31525L1525LttGttA131711AY.260.000368
ORF1ab/nsp31525L1525LttGttA26252B.1.1.70.000023
ORF1ab/nsp31525L1525LttGttA106113AY.40.000165
ORF1ab/nsp31525L1525LttGttA9898AY.250.000589
ORF1ab/nsp31525L1525LttGttA1246AY.30.000119
ORF1ab/nsp31525L1525LttGttA2737B.1.617.20.000102
ORF1ab/nsp31525L1525LttGttA332B.10.000027
ORF1ab/nsp31525L1525LttGttA2731B.1.4290.000635
ORF1ab/nsp31525L1525LttGttA2324B.1.3510.000684
ORF1ab/nsp31525L1525LttGttA1923B.1.1770.00025
ORF1ab/nsp31525L1525LttGttA1215P.10.000189
ORF1ab/nsp31525L1525LttGttA1214AY.440.000073
ORF1ab/nsp31525L1525LttGttA1214B.1.20.000106
ORF1ab/nsp31525L1525LttGttA1011B.1.258.170.00104
ORF1ab/nsp31525L1525LttGttA910AY.430.00004
ORF1ab/nsp31525L1525LttGttA1010AY.98.10.000484
ORF1ab/nsp31525L1525LttGttA38B.1.360.000438
ORF1ab/nsp31525L1525LttGttA46B.1.5260.000094
ORF1ab/nsp31525L1525LttGttA25AY.1030.000012
ORF1ab/nsp31525L1525LttGttA55B.1.1.500.003394
ORF1ab/nsp31525L1525LttGttA45B.1.1600.000125
ORF1ab/nsp31525L1525LttGttA44AY.1190.000141
ORF1ab/nsp31525L1525LttGttA44AY.470.000124
ORF1ab/nsp31525L1525LttGttA44B.1.36.290.002069
ORF1ab/nsp31525L1525LttGttA44P.1.20.004624
ORF1ab/nsp31525L1525LttGttA33AY.1020.00008
ORF1ab/nsp31525L1525LttGttA13AY.330.000067
ORF1ab/nsp31525L1525LttGttA13B.1.1.3260.001761
ORF1ab/nsp31525L1525LttGttA23B.1.2340.000264
ORF1ab/nsp31525L1525LttGttA33B.1.240.20.090909
ORF1ab/nsp31525L1525LttGttA33B.1.4270.000151
ORF1ab/nsp31525L1525LttGttA12AY.1180.000063
ORF1ab/nsp31525L1525LttGttA12AY.200.000039
ORF1ab/nsp31525L1525LttGttA12AY.230.00007
ORF1ab/nsp31525L1525LttGttA12AY.390.000025
ORF1ab/nsp31525L1525LttGttA12AY.50.000021
ORF1ab/nsp31525L1525LttGttA22AY.980.000158
ORF1ab/nsp31525L1525LttGttA22B.1.1.5190.000079
ORF1ab/nsp31525L1525LttGttA22B.1.177.150.001262
ORF1ab/nsp31525L1525LttGttA22B.1.177.70.00033
ORF1ab/nsp31525L1525LttGttA12C.370.000116
ORF1ab/nsp31525L1525LttGttA22P.1.140.000096
ORF1ab/nsp31525L1525LttGttA11AY.1090.00074
ORF1ab/nsp31525L1525LttGttA11AY.1170.000085
ORF1ab/nsp31525L1525LttGttA11AY.1200.000037
ORF1ab/nsp31525L1525LttGttA11AY.120.20.001285
ORF1ab/nsp31525L1525LttGttA11AY.23.10.000417
ORF1ab/nsp31525L1525LttGttA11AY.290.000016
ORF1ab/nsp31525L1525LttGttA11AY.34.10.00051
ORF1ab/nsp31525L1525LttGttA11AY.39.10.00004
ORF1ab/nsp31525L1525LttGttA11AY.450.000122
ORF1ab/nsp31525L1525LttGttA11AY.460.000104
ORF1ab/nsp31525L1525LttGttA11AY.46.40.000165
ORF1ab/nsp31525L1525LttGttA11AY.46.60.000072
ORF1ab/nsp31525L1525LttGttA11AY.5.40.000277
ORF1ab/nsp31525L1525LttGttA11AY.530.000288
ORF1ab/nsp31525L1525LttGttA11AY.690.000187
ORF1ab/nsp31525L1525LttGttA11AY.9.10.000084
ORF1ab/nsp31525L1525LttGttA11B.1.10.000018
ORF1ab/nsp31525L1525LttGttA11B.1.1.1890.001513
ORF1ab/nsp31525L1525LttGttA11B.1.1.5260.003546
ORF1ab/nsp31525L1525LttGttA11B.1.1.80.003584
ORF1ab/nsp31525L1525LttGttA11B.1.177.730.000566
ORF1ab/nsp31525L1525LttGttA11B.1.1890.004292
ORF1ab/nsp31525L1525LttGttA11B.1.258.120.007874
ORF1ab/nsp31525L1525LttGttA11B.1.5600.00463
ORF1ab/nsp31525L1525LttGttA11B.30.000831
ORF1ab/nsp31525L1525LttGttA11C.160.00106
ORF1ab/nsp31525L1525LttGttA11P.1.150.000232