CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1525 & Codon = Ctg

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31525L1525LL2343LsynTtgCtg278522740.8165177292-7294

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31525L1525LTtgCtg22742785All0.000435
ORF1ab/nsp31525L1525LTtgCtg16981711AY.260.048071
ORF1ab/nsp31525L1525LTtgCtg226252B.1.1.70.000202
ORF1ab/nsp31525L1525LTtgCtg166166B.1.36.280.954023
ORF1ab/nsp31525L1525LTtgCtg7113AY.40.000011
ORF1ab/nsp31525L1525LTtgCtg3446AY.30.000338
ORF1ab/nsp31525L1525LTtgCtg1037B.1.617.20.000038
ORF1ab/nsp31525L1525LTtgCtg2832B.10.000256
ORF1ab/nsp31525L1525LTtgCtg431B.1.4290.000094
ORF1ab/nsp31525L1525LTtgCtg2929B.1.4970.009128
ORF1ab/nsp31525L1525LTtgCtg124B.1.3510.00003
ORF1ab/nsp31525L1525LTtgCtg423B.1.1770.000053
ORF1ab/nsp31525L1525LTtgCtg315P.10.000047
ORF1ab/nsp31525L1525LTtgCtg214AY.440.000012
ORF1ab/nsp31525L1525LTtgCtg214B.1.20.000018
ORF1ab/nsp31525L1525LTtgCtg111B.1.258.170.000104
ORF1ab/nsp31525L1525LTtgCtg110AY.430.000004
ORF1ab/nsp31525L1525LTtgCtg58B.1.360.00073
ORF1ab/nsp31525L1525LTtgCtg26B.1.5260.000047
ORF1ab/nsp31525L1525LTtgCtg35AY.1030.000019
ORF1ab/nsp31525L1525LTtgCtg15B.1.1600.000031
ORF1ab/nsp31525L1525LTtgCtg55B.1.517.10.026316
ORF1ab/nsp31525L1525LTtgCtg23AY.330.000134
ORF1ab/nsp31525L1525LTtgCtg33AY.610.000314
ORF1ab/nsp31525L1525LTtgCtg33B.1.1.2140.000166
ORF1ab/nsp31525L1525LTtgCtg13B.1.1.3260.001761
ORF1ab/nsp31525L1525LTtgCtg13B.1.2340.000132
ORF1ab/nsp31525L1525LTtgCtg12AY.1180.000063
ORF1ab/nsp31525L1525LTtgCtg12AY.200.000039
ORF1ab/nsp31525L1525LTtgCtg12AY.230.00007
ORF1ab/nsp31525L1525LTtgCtg12AY.390.000025
ORF1ab/nsp31525L1525LTtgCtg22AY.4.20.000043
ORF1ab/nsp31525L1525LTtgCtg12AY.50.000021
ORF1ab/nsp31525L1525LTtgCtg22B.1.2430.000139
ORF1ab/nsp31525L1525LTtgCtg12C.370.000116
ORF1ab/nsp31525L1525LTtgCtg22P.1.170.000324
ORF1ab/nsp31525L1525LTtgCtg22Q.60.013245
ORF1ab/nsp31525L1525LTtgCtg11A.210.00277
ORF1ab/nsp31525L1525LTtgCtg11AF.10.037037
ORF1ab/nsp31525L1525LTtgCtg11AY.1130.000142
ORF1ab/nsp31525L1525LTtgCtg11AY.4.50.000107
ORF1ab/nsp31525L1525LTtgCtg11AY.540.000095
ORF1ab/nsp31525L1525LTtgCtg11AY.620.000436
ORF1ab/nsp31525L1525LTtgCtg11AY.99.20.000092
ORF1ab/nsp31525L1525LTtgCtg11B.1.1.2840.000107
ORF1ab/nsp31525L1525LTtgCtg11B.1.1.5070.008696
ORF1ab/nsp31525L1525LTtgCtg11B.1.1260.001276
ORF1ab/nsp31525L1525LTtgCtg11B.1.177.210.000076
ORF1ab/nsp31525L1525LTtgCtg11B.1.2600.003344
ORF1ab/nsp31525L1525LTtgCtg11B.1.3290.000608
ORF1ab/nsp31525L1525LTtgCtg11B.1.5960.000087
ORF1ab/nsp31525L1525LTtgCtg11B.1.6180.004032
ORF1ab/nsp31525L1525LTtgCtg11B.300.014706
ORF1ab/nsp31525L1525LTtgCtg11Q.10.000126
ORF1ab/nsp31525L1525LTtgCtg11Q.80.000165