CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1522 & Codon = Cta

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31522V1522LV2340LnonsynGtaCta3813530.9265097283-7285

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31522V1522LGtaCta353381All0.000068
ORF1ab/nsp31522V1522LGtaCta9797B.1.20.000854
ORF1ab/nsp31522V1522LGtaCta9191B.1.4290.002141
ORF1ab/nsp31522V1522LGtaCta3333B.1.4270.001666
ORF1ab/nsp31522V1522LGtaCta1621B.1.1.70.000014
ORF1ab/nsp31522V1522LGtaCta1919B.1.2430.001322
ORF1ab/nsp31522V1522LGtaCta1415B.1.5960.00122
ORF1ab/nsp31522V1522LGtaCta1010B.1.1.5190.000397
ORF1ab/nsp31522V1522LGtaCta78B.10.000064
ORF1ab/nsp31522V1522LGtaCta66B.1.2390.007326
ORF1ab/nsp31522V1522LGtaCta66B.1.243.10.133333
ORF1ab/nsp31522V1522LGtaCta55B.1.5510.006452
ORF1ab/nsp31522V1522LGtaCta55R.10.00045
ORF1ab/nsp31522V1522LGtaCta44P.20.000747
ORF1ab/nsp31522V1522LGtaCta33B.1.1.3480.002389
ORF1ab/nsp31522V1522LGtaCta33B.1.4040.003906
ORF1ab/nsp31522V1522LGtaCta33B.1.6090.001438
ORF1ab/nsp31522V1522LGtaCta12B.1.10.000018
ORF1ab/nsp31522V1522LGtaCta22B.1.1.2220.000408
ORF1ab/nsp31522V1522LGtaCta22B.1.2320.001075
ORF1ab/nsp31522V1522LGtaCta22B.1.2340.000264
ORF1ab/nsp31522V1522LGtaCta22B.1.3960.001411
ORF1ab/nsp31522V1522LGtaCta22B.1.4000.000858
ORF1ab/nsp31522V1522LGtaCta22B.1.5610.000794
ORF1ab/nsp31522V1522LGtaCta12B.1.617.20.000004
ORF1ab/nsp31522V1522LGtaCta12D.20.000075
ORF1ab/nsp31522V1522LGtaCta11AY.390.000025
ORF1ab/nsp31522V1522LGtaCta11AY.430.000004
ORF1ab/nsp31522V1522LGtaCta11AZ.30.00152
ORF1ab/nsp31522V1522LGtaCta11B.1.1.3160.000925
ORF1ab/nsp31522V1522LGtaCta11B.1.2400.000216
ORF1ab/nsp31522V1522LGtaCta11B.1.2650.001271
ORF1ab/nsp31522V1522LGtaCta11B.1.3110.000275
ORF1ab/nsp31522V1522LGtaCta11B.1.3510.00003
ORF1ab/nsp31522V1522LGtaCta11B.1.3690.000285
ORF1ab/nsp31522V1522LGtaCta11B.1.4080.00369
ORF1ab/nsp31522V1522LGtaCta11B.1.4230.010204
ORF1ab/nsp31522V1522LGtaCta11B.1.5670.003333
ORF1ab/nsp31522V1522LGtaCta11B.1.5680.001111
ORF1ab/nsp31522V1522LGtaCta11B.1.5750.000303
ORF1ab/nsp31522V1522LGtaCta11B.1.5950.000261
ORF1ab/nsp31522V1522LGtaCta11B.1.810.021277