CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1516 & Codon = Ctc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31516F1516LF2334LnonsynTtcCtc5394970.9220787265-7267

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31516F1516LTtcCtc497539All0.000095
ORF1ab/nsp31516F1516LTtcCtc313313B.1.5880.284804
ORF1ab/nsp31516F1516LTtcCtc4953B.10.000449
ORF1ab/nsp31516F1516LTtcCtc4448B.1.20.000387
ORF1ab/nsp31516F1516LTtcCtc1926B.1.1.70.000017
ORF1ab/nsp31516F1516LTtcCtc2626B.1.5950.006785
ORF1ab/nsp31516F1516LTtcCtc911B.1.617.20.000034
ORF1ab/nsp31516F1516LTtcCtc79AY.40.000011
ORF1ab/nsp31516F1516LTtcCtc55AY.540.000477
ORF1ab/nsp31516F1516LTtcCtc25B.1.5610.000794
ORF1ab/nsp31516F1516LTtcCtc44B.1.5670.013333
ORF1ab/nsp31516F1516LTtcCtc23AY.440.000012
ORF1ab/nsp31516F1516LTtcCtc33B.1.1.3760.017857
ORF1ab/nsp31516F1516LTtcCtc22B.1.1.2770.001517
ORF1ab/nsp31516F1516LTtcCtc12B.1.5960.000087
ORF1ab/nsp31516F1516LTtcCtc11AY.270.000065
ORF1ab/nsp31516F1516LTtcCtc11AY.290.000016
ORF1ab/nsp31516F1516LTtcCtc11AY.360.000148
ORF1ab/nsp31516F1516LTtcCtc11AY.430.000004
ORF1ab/nsp31516F1516LTtcCtc11B.1.1.3060.000438
ORF1ab/nsp31516F1516LTtcCtc11B.1.1.3680.003086
ORF1ab/nsp31516F1516LTtcCtc11B.1.1.3770.001381
ORF1ab/nsp31516F1516LTtcCtc11B.1.177.70.000165
ORF1ab/nsp31516F1516LTtcCtc11B.1.3510.00003
ORF1ab/nsp31516F1516LTtcCtc11B.1.360.000146
ORF1ab/nsp31516F1516LTtcCtc11B.1.5260.000024