CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1502 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31502A1502VA2320VnonsyngCtgTt406340620.9997547223-7225

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31502A1502VgCtgTt40624063All0.000777
ORF1ab/nsp31502A1502VgCtgTt19601960Q.40.891314
ORF1ab/nsp31502A1502VgCtgTt602602B.1.258.160.98527
ORF1ab/nsp31502A1502VgCtgTt409409B.1.1.70.000366
ORF1ab/nsp31502A1502VgCtgTt193193AY.40.0003
ORF1ab/nsp31502A1502VgCtgTt7878B.1.617.20.000294
ORF1ab/nsp31502A1502VgCtgTt7373B.1.110.30.052443
ORF1ab/nsp31502A1502VgCtgTt5152B.1.10.000925
ORF1ab/nsp31502A1502VgCtgTt4747AY.440.000286
ORF1ab/nsp31502A1502VgCtgTt4141AY.200.001593
ORF1ab/nsp31502A1502VgCtgTt3535AY.430.000155
ORF1ab/nsp31502A1502VgCtgTt3434B.1.20.000299
ORF1ab/nsp31502A1502VgCtgTt3333B.1.1600.001029
ORF1ab/nsp31502A1502VgCtgTt3333Q.80.005442
ORF1ab/nsp31502A1502VgCtgTt3131AY.1030.000192
ORF1ab/nsp31502A1502VgCtgTt2424AY.470.000747
ORF1ab/nsp31502A1502VgCtgTt2323B.10.000211
ORF1ab/nsp31502A1502VgCtgTt2020B.1.1770.000263
ORF1ab/nsp31502A1502VgCtgTt1919AY.1020.000504
ORF1ab/nsp31502A1502VgCtgTt1919AY.250.000114
ORF1ab/nsp31502A1502VgCtgTt1616AY.30.000159
ORF1ab/nsp31502A1502VgCtgTt1616B.1.2340.002111
ORF1ab/nsp31502A1502VgCtgTt1414AY.720.019048
ORF1ab/nsp31502A1502VgCtgTt1212P.1.70.003831
ORF1ab/nsp31502A1502VgCtgTt1111B.1.6370.000804
ORF1ab/nsp31502A1502VgCtgTt1010B.1.1.700.003411
ORF1ab/nsp31502A1502VgCtgTt99AY.1110.001648
ORF1ab/nsp31502A1502VgCtgTt99AY.9.20.000331
ORF1ab/nsp31502A1502VgCtgTt99B.1.2580.000599
ORF1ab/nsp31502A1502VgCtgTt99B.1.4820.75
ORF1ab/nsp31502A1502VgCtgTt88AY.420.000322
ORF1ab/nsp31502A1502VgCtgTt77AY.300.00277
ORF1ab/nsp31502A1502VgCtgTt77AY.810.013944
ORF1ab/nsp31502A1502VgCtgTt77B.1.1.3970.015766
ORF1ab/nsp31502A1502VgCtgTt77C.160.007423
ORF1ab/nsp31502A1502VgCtgTt66AY.1170.000507
ORF1ab/nsp31502A1502VgCtgTt66AY.290.000095
ORF1ab/nsp31502A1502VgCtgTt66AY.980.000474
ORF1ab/nsp31502A1502VgCtgTt66B.1.2360.01232
ORF1ab/nsp31502A1502VgCtgTt66P.10.000095
ORF1ab/nsp31502A1502VgCtgTt55AY.50.000103
ORF1ab/nsp31502A1502VgCtgTt55B.1.1.2840.000537
ORF1ab/nsp31502A1502VgCtgTt55B.1.2210.000355
ORF1ab/nsp31502A1502VgCtgTt55B.1.2430.000348
ORF1ab/nsp31502A1502VgCtgTt55B.1.3510.000149
ORF1ab/nsp31502A1502VgCtgTt55B.1.5260.000118
ORF1ab/nsp31502A1502VgCtgTt44AY.16.10.00188
ORF1ab/nsp31502A1502VgCtgTt44AY.46.60.000289
ORF1ab/nsp31502A1502VgCtgTt44AY.590.002119
ORF1ab/nsp31502A1502VgCtgTt44B.1.5250.000453
ORF1ab/nsp31502A1502VgCtgTt44B.1.6210.000354
ORF1ab/nsp31502A1502VgCtgTt33AY.1190.000106
ORF1ab/nsp31502A1502VgCtgTt33AY.120.10.000963
ORF1ab/nsp31502A1502VgCtgTt33AY.390.000074
ORF1ab/nsp31502A1502VgCtgTt33AY.4.20.000065
ORF1ab/nsp31502A1502VgCtgTt33AY.740.000347
ORF1ab/nsp31502A1502VgCtgTt33B.1.1.280.000934
ORF1ab/nsp31502A1502VgCtgTt33B.1.4290.000071
ORF1ab/nsp31502A1502VgCtgTt22AY.1000.000092
ORF1ab/nsp31502A1502VgCtgTt22AY.1050.001286
ORF1ab/nsp31502A1502VgCtgTt22AY.320.001065
ORF1ab/nsp31502A1502VgCtgTt22AY.450.000243
ORF1ab/nsp31502A1502VgCtgTt22AY.620.000871
ORF1ab/nsp31502A1502VgCtgTt22AY.7.10.000225
ORF1ab/nsp31502A1502VgCtgTt22AY.75.10.000361
ORF1ab/nsp31502A1502VgCtgTt22B.1.1.1740.006757
ORF1ab/nsp31502A1502VgCtgTt22B.1.1.510.003436
ORF1ab/nsp31502A1502VgCtgTt22B.1.428.30.025641
ORF1ab/nsp31502A1502VgCtgTt22B.1.4710.005464
ORF1ab/nsp31502A1502VgCtgTt22P.70.008734
ORF1ab/nsp31502A1502VgCtgTt11A.2.5.10.004808
ORF1ab/nsp31502A1502VgCtgTt11A.280.002646
ORF1ab/nsp31502A1502VgCtgTt11A.300.142857
ORF1ab/nsp31502A1502VgCtgTt11AY.1060.000335
ORF1ab/nsp31502A1502VgCtgTt11AY.120.000316
ORF1ab/nsp31502A1502VgCtgTt11AY.1200.000037
ORF1ab/nsp31502A1502VgCtgTt11AY.1210.000135
ORF1ab/nsp31502A1502VgCtgTt11AY.140.000088
ORF1ab/nsp31502A1502VgCtgTt11AY.230.00007
ORF1ab/nsp31502A1502VgCtgTt11AY.260.000028
ORF1ab/nsp31502A1502VgCtgTt11AY.270.000065
ORF1ab/nsp31502A1502VgCtgTt11AY.340.000097
ORF1ab/nsp31502A1502VgCtgTt11AY.360.000148
ORF1ab/nsp31502A1502VgCtgTt11AY.39.10.00004
ORF1ab/nsp31502A1502VgCtgTt11AY.4.2.10.000149
ORF1ab/nsp31502A1502VgCtgTt11AY.4.40.000409
ORF1ab/nsp31502A1502VgCtgTt11AY.4.50.000107
ORF1ab/nsp31502A1502VgCtgTt11AY.60.000041
ORF1ab/nsp31502A1502VgCtgTt11AY.610.000105
ORF1ab/nsp31502A1502VgCtgTt11AY.70.000196
ORF1ab/nsp31502A1502VgCtgTt11AY.770.001127
ORF1ab/nsp31502A1502VgCtgTt11AY.9.10.000084
ORF1ab/nsp31502A1502VgCtgTt11AY.940.000443
ORF1ab/nsp31502A1502VgCtgTt11B0.000128
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.1410.002012
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.2140.000055
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.2660.012195
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.2890.002083
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.3060.000438
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.3120.001912
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.3690.000446
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.370.000193
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.4320.001266
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.4340.000349
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.4860.001577
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.5190.00004
ORF1ab/nsp31502A1502VgCtgTt11B.1.160.160.000929
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.430.001477
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.450.000381
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.70.000165
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.730.000566
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.770.000726
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.80.000752
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.810.000189
ORF1ab/nsp31502A1502VgCtgTt11B.1.2320.000537
ORF1ab/nsp31502A1502VgCtgTt11B.1.2400.000216
ORF1ab/nsp31502A1502VgCtgTt11B.1.258.110.000396
ORF1ab/nsp31502A1502VgCtgTt11B.1.351.20.000303
ORF1ab/nsp31502A1502VgCtgTt11B.1.360.000146
ORF1ab/nsp31502A1502VgCtgTt11B.1.36.180.00042
ORF1ab/nsp31502A1502VgCtgTt11B.1.4560.003268
ORF1ab/nsp31502A1502VgCtgTt11B.1.4990.00105
ORF1ab/nsp31502A1502VgCtgTt11B.1.564.10.001577
ORF1ab/nsp31502A1502VgCtgTt11B.1.5960.000087
ORF1ab/nsp31502A1502VgCtgTt11B.1.617.10.000129
ORF1ab/nsp31502A1502VgCtgTt11B.1.6280.000352
ORF1ab/nsp31502A1502VgCtgTt11C.350.000774
ORF1ab/nsp31502A1502VgCtgTt11N.100.029412
ORF1ab/nsp31502A1502VgCtgTt11P.1.150.000232
ORF1ab/nsp31502A1502VgCtgTt11Q.10.000126
ORF1ab/nsp31502A1502VgCtgTt11Q.70.001111