CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1502

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31502A1502VA2320VnonsyngCtgTt406340620.9997547223-7225
ORF1ab/nsp31502A1502VA2320VnonsyngCTgTG406310.0002461247223-7225
ORF1ab/nsp31502A1502TA2320TnonsynGctAct30230217223-7225
ORF1ab/nsp31502A1502AA2320AsyngcTgcC2351810.7702137223-7225
ORF1ab/nsp31502A1502AA2320AsyngcTgcG235400.1702137223-7225
ORF1ab/nsp31502A1502AA2320AsyngcTgcA235140.05957457223-7225
ORF1ab/nsp31502A1502delA2320deldelGCT---868617223-7225
ORF1ab/nsp31502A1502SA2320SnonsynGctTct39380.9743597223-7225
ORF1ab/nsp31502A1502SA2320SnonsynGcTTcA3910.0256417223-7225
ORF1ab/nsp31502A1502del1A2320del1delgcTgc-24220.9166677223-7225
ORF1ab/nsp31502A1502del1A2320del1delGCt-Tt2410.04166677223-7225
ORF1ab/nsp31502A1502del1A2320del1delGcTRc-2410.04166677223-7225
ORF1ab/nsp31502A1502DA2320DnonsyngCtgAt212117223-7225
ORF1ab/nsp31502A1502NA2320NnonsynGCtAAt101017223-7225
ORF1ab/nsp31502A1502GA2320GnonsyngCtgGt980.8888897223-7225
ORF1ab/nsp31502A1502GA2320GnonsyngCTgGC910.1111117223-7225
ORF1ab/nsp31502A1502PA2320PnonsynGctCct6617223-7225
ORF1ab/nsp31502A1502YA2320YnonsynGCtTAt5517223-7225
ORF1ab/nsp31502A1502EA2320EnonsyngCTgAA210.57223-7225
ORF1ab/nsp31502A1502EA2320EnonsyngCTgAG210.57223-7225
ORF1ab/nsp31502A1502RA2320RnonsynGCtCGt1117223-7225
ORF1ab/nsp31502A1502XA2320XnonsynGCTTAA1117223-7225

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31502A1502VgCtgTt40624063All0.000777
ORF1ab/nsp31502A1502VgCTgTG14063All0
ORF1ab/nsp31502A1502VgCtgTt19601960Q.40.891314
ORF1ab/nsp31502A1502VgCtgTt602602B.1.258.160.98527
ORF1ab/nsp31502A1502VgCtgTt409409B.1.1.70.000366
ORF1ab/nsp31502A1502TGctAct302302All0.000058
ORF1ab/nsp31502A1502AgcTgcC181235All0.000035
ORF1ab/nsp31502A1502AgcTgcG40235All0.000008
ORF1ab/nsp31502A1502AgcTgcA14235All0.000003
ORF1ab/nsp31502A1502VgCtgTt193193AY.40.0003
ORF1ab/nsp31502A1502delGCT---8686All0.000016
ORF1ab/nsp31502A1502VgCtgTt7878B.1.617.20.000294
ORF1ab/nsp31502A1502VgCtgTt7373B.1.110.30.052443
ORF1ab/nsp31502A1502TGctAct5959B.1.1.3281
ORF1ab/nsp31502A1502VgCtgTt5152B.1.10.000925
ORF1ab/nsp31502A1502VgCTgTG152B.1.10.000018
ORF1ab/nsp31502A1502VgCtgTt4747AY.440.000286
ORF1ab/nsp31502A1502AgcTgcC4747B.4.40.886792
ORF1ab/nsp31502A1502TGctAct4444B.1.4060.266667
ORF1ab/nsp31502A1502VgCtgTt4141AY.200.001593
ORF1ab/nsp31502A1502SGctTct3839All0.000007
ORF1ab/nsp31502A1502SGcTTcA139All0
ORF1ab/nsp31502A1502VgCtgTt3535AY.430.000155
ORF1ab/nsp31502A1502VgCtgTt3434B.1.20.000299
ORF1ab/nsp31502A1502TGctAct3434B.1.5260.000799
ORF1ab/nsp31502A1502VgCtgTt3333B.1.1600.001029
ORF1ab/nsp31502A1502VgCtgTt3333Q.80.005442
ORF1ab/nsp31502A1502VgCtgTt3131AY.1030.000192
ORF1ab/nsp31502A1502AgcTgcC1525B.1.1.70.000013
ORF1ab/nsp31502A1502AgcTgcA825B.1.1.70.000007
ORF1ab/nsp31502A1502AgcTgcG225B.1.1.70.000002
ORF1ab/nsp31502A1502TGctAct2525C.350.01935
ORF1ab/nsp31502A1502del1gcTgc-2224All0.000004
ORF1ab/nsp31502A1502del1GcTRc-124All0
ORF1ab/nsp31502A1502del1GCt-Tt124All0
ORF1ab/nsp31502A1502VgCtgTt2424AY.470.000747
ORF1ab/nsp31502A1502TGctAct2424B.1.617.20.00009
ORF1ab/nsp31502A1502VgCtgTt2323B.10.000211
ORF1ab/nsp31502A1502DgCtgAt2121All0.000004
ORF1ab/nsp31502A1502VgCtgTt2020B.1.1770.000263
ORF1ab/nsp31502A1502VgCtgTt1919AY.1020.000504
ORF1ab/nsp31502A1502VgCtgTt1919AY.250.000114
ORF1ab/nsp31502A1502AgcTgcC1019AY.40.000016
ORF1ab/nsp31502A1502AgcTgcG719AY.40.000011
ORF1ab/nsp31502A1502AgcTgcA219AY.40.000003
ORF1ab/nsp31502A1502delGCT---1919B.1.1.70.000017
ORF1ab/nsp31502A1502VgCtgTt1616AY.30.000159
ORF1ab/nsp31502A1502VgCtgTt1616B.1.2340.002111
ORF1ab/nsp31502A1502VgCtgTt1414AY.720.019048
ORF1ab/nsp31502A1502TGctAct1313AY.430.000058
ORF1ab/nsp31502A1502AgcTgcC1212AY.440.000073
ORF1ab/nsp31502A1502AgcTgcC1112B.1.617.20.000041
ORF1ab/nsp31502A1502AgcTgcG112B.1.617.20.000004
ORF1ab/nsp31502A1502VgCtgTt1212P.1.70.003831
ORF1ab/nsp31502A1502TGctAct1111AY.40.000017
ORF1ab/nsp31502A1502VgCtgTt1111B.1.6370.000804
ORF1ab/nsp31502A1502NGCtAAt1010All0.000002
ORF1ab/nsp31502A1502AgcTgcC910B.10.000082
ORF1ab/nsp31502A1502AgcTgcG110B.10.000009
ORF1ab/nsp31502A1502VgCtgTt1010B.1.1.700.003411
ORF1ab/nsp31502A1502GgCtgGt89All0.000002
ORF1ab/nsp31502A1502GgCTgGC19All0
ORF1ab/nsp31502A1502VgCtgTt99AY.1110.001648
ORF1ab/nsp31502A1502VgCtgTt99AY.9.20.000331
ORF1ab/nsp31502A1502TGctAct99B.1.1.70.000008
ORF1ab/nsp31502A1502VgCtgTt99B.1.2580.000599
ORF1ab/nsp31502A1502VgCtgTt99B.1.4820.75
ORF1ab/nsp31502A1502VgCtgTt88AY.420.000322
ORF1ab/nsp31502A1502delGCT---88B.10.000073
ORF1ab/nsp31502A1502AgcTgcG88B.1.1600.00025
ORF1ab/nsp31502A1502TGctAct88B.1.1770.000105
ORF1ab/nsp31502A1502AgcTgcC78B.1.20.000062
ORF1ab/nsp31502A1502AgcTgcG18B.1.20.000009
ORF1ab/nsp31502A1502AgcTgcG77AY.260.000198
ORF1ab/nsp31502A1502VgCtgTt77AY.300.00277
ORF1ab/nsp31502A1502DgCtgAt77AY.40.000011
ORF1ab/nsp31502A1502SGctTct77AY.40.000011
ORF1ab/nsp31502A1502TGctAct77AY.440.000043
ORF1ab/nsp31502A1502VgCtgTt77AY.810.013944
ORF1ab/nsp31502A1502VgCtgTt77B.1.1.3970.015766
ORF1ab/nsp31502A1502VgCtgTt77C.160.007423
ORF1ab/nsp31502A1502PGctCct66All0.000001
ORF1ab/nsp31502A1502VgCtgTt66AY.1170.000507
ORF1ab/nsp31502A1502VgCtgTt66AY.290.000095
ORF1ab/nsp31502A1502AgcTgcC66AY.750.000336
ORF1ab/nsp31502A1502VgCtgTt66AY.980.000474
ORF1ab/nsp31502A1502SGctTct66B.1.1.70.000005
ORF1ab/nsp31502A1502VgCtgTt66B.1.2360.01232
ORF1ab/nsp31502A1502AgcTgcC66B.1.360.000875
ORF1ab/nsp31502A1502NGCtAAt66B.1.4270.000303
ORF1ab/nsp31502A1502VgCtgTt66P.10.000095
ORF1ab/nsp31502A1502YGCtTAt55All0.000001
ORF1ab/nsp31502A1502delGCT---55AY.430.000022
ORF1ab/nsp31502A1502VgCtgTt55AY.50.000103
ORF1ab/nsp31502A1502TGctAct55AY.540.000477
ORF1ab/nsp31502A1502VgCtgTt55B.1.1.2840.000537
ORF1ab/nsp31502A1502TGctAct55B.1.1.5190.000199
ORF1ab/nsp31502A1502VgCtgTt55B.1.2210.000355
ORF1ab/nsp31502A1502VgCtgTt55B.1.2430.000348
ORF1ab/nsp31502A1502VgCtgTt55B.1.3510.000149
ORF1ab/nsp31502A1502VgCtgTt55B.1.5260.000118
ORF1ab/nsp31502A1502AgcTgcC55B.40.011038
ORF1ab/nsp31502A1502delGCT---440.222222
ORF1ab/nsp31502A1502DgCtgAt44AY.1030.000025
ORF1ab/nsp31502A1502TGctAct44AY.1030.000025
ORF1ab/nsp31502A1502VgCtgTt44AY.16.10.00188
ORF1ab/nsp31502A1502AgcTgcG44AY.30.00004
ORF1ab/nsp31502A1502AgcTgcC44AY.430.000018
ORF1ab/nsp31502A1502VgCtgTt44AY.46.60.000289
ORF1ab/nsp31502A1502VgCtgTt44AY.590.002119
ORF1ab/nsp31502A1502TGctAct44AY.9.20.000147
ORF1ab/nsp31502A1502TGctAct44AY.98.10.000194
ORF1ab/nsp31502A1502AgcTgcC44B.1.10.000073
ORF1ab/nsp31502A1502GgCtgGt44B.1.1.70.000004
ORF1ab/nsp31502A1502del1gcTgc-44B.1.1.70.000004
ORF1ab/nsp31502A1502SGctTct44B.1.1600.000125
ORF1ab/nsp31502A1502TGctAct44B.1.20.000035
ORF1ab/nsp31502A1502VgCtgTt44B.1.5250.000453
ORF1ab/nsp31502A1502AgcTgcC44B.1.6210.000354
ORF1ab/nsp31502A1502VgCtgTt44B.1.6210.000354
ORF1ab/nsp31502A1502TGctAct44C.370.000464
ORF1ab/nsp31502A1502VgCtgTt33AY.1190.000106
ORF1ab/nsp31502A1502VgCtgTt33AY.120.10.000963
ORF1ab/nsp31502A1502TGctAct33AY.250.000018
ORF1ab/nsp31502A1502VgCtgTt33AY.390.000074
ORF1ab/nsp31502A1502PGctCct33AY.40.000005
ORF1ab/nsp31502A1502VgCtgTt33AY.4.20.000065
ORF1ab/nsp31502A1502AgcTgcG13AY.4.20.000022
ORF1ab/nsp31502A1502AgcTgcA13AY.4.20.000022
ORF1ab/nsp31502A1502AgcTgcC13AY.4.20.000022
ORF1ab/nsp31502A1502AgcTgcG33AY.520.002443
ORF1ab/nsp31502A1502VgCtgTt33AY.740.000347
ORF1ab/nsp31502A1502del1gcTgc-33B.10.000027
ORF1ab/nsp31502A1502SGctTct33B.10.000027
ORF1ab/nsp31502A1502TGctAct33B.1.10.000054
ORF1ab/nsp31502A1502delGCT---33B.1.1.2180.023077
ORF1ab/nsp31502A1502VgCtgTt33B.1.1.280.000934
ORF1ab/nsp31502A1502delGCT---33B.1.1770.00004
ORF1ab/nsp31502A1502delGCT---33B.1.4110.011111
ORF1ab/nsp31502A1502VgCtgTt33B.1.4290.000071
ORF1ab/nsp31502A1502GgCtgGt23B.1.617.20.000008
ORF1ab/nsp31502A1502GgCTgGC13B.1.617.20.000004
ORF1ab/nsp31502A1502TGctAct220.111111
ORF1ab/nsp31502A1502SGctTct120.055556
ORF1ab/nsp31502A1502SGcTTcA120.055556
ORF1ab/nsp31502A1502EgCTgAA12All0
ORF1ab/nsp31502A1502EgCTgAG12All0
ORF1ab/nsp31502A1502VgCtgTt22AY.1000.000092
ORF1ab/nsp31502A1502AgcTgcG12AY.1030.000006
ORF1ab/nsp31502A1502AgcTgcC12AY.1030.000006
ORF1ab/nsp31502A1502VgCtgTt22AY.1050.001286
ORF1ab/nsp31502A1502TGctAct22AY.1190.000071
ORF1ab/nsp31502A1502delGCT---22AY.250.000012
ORF1ab/nsp31502A1502TGctAct22AY.260.000057
ORF1ab/nsp31502A1502AgcTgcC22AY.270.000129
ORF1ab/nsp31502A1502VgCtgTt22AY.320.001065
ORF1ab/nsp31502A1502del1gcTgc-22AY.40.000003
ORF1ab/nsp31502A1502NGCtAAt22AY.40.000003
ORF1ab/nsp31502A1502delGCT---22AY.40.000003
ORF1ab/nsp31502A1502delGCT---22AY.4.50.000215
ORF1ab/nsp31502A1502VgCtgTt22AY.450.000243
ORF1ab/nsp31502A1502AgcTgcG12AY.50.000021
ORF1ab/nsp31502A1502AgcTgcC12AY.50.000021
ORF1ab/nsp31502A1502VgCtgTt22AY.620.000871
ORF1ab/nsp31502A1502VgCtgTt22AY.7.10.000225
ORF1ab/nsp31502A1502VgCtgTt22AY.75.10.000361
ORF1ab/nsp31502A1502TGctAct22AY.9.10.000167
ORF1ab/nsp31502A1502SGctTct22B.1.10.000036
ORF1ab/nsp31502A1502VgCtgTt22B.1.1.1740.006757
ORF1ab/nsp31502A1502VgCtgTt22B.1.1.510.003436
ORF1ab/nsp31502A1502AgcTgcC22B.1.177.530.004785
ORF1ab/nsp31502A1502delGCT---22B.1.177.620.002384
ORF1ab/nsp31502A1502del1gcTgc-12B.1.20.000009
ORF1ab/nsp31502A1502del1GCt-Tt12B.1.20.000009
ORF1ab/nsp31502A1502VgCtgTt22B.1.428.30.025641
ORF1ab/nsp31502A1502AgcTgcC22B.1.4290.000047
ORF1ab/nsp31502A1502VgCtgTt22B.1.4710.005464
ORF1ab/nsp31502A1502del1gcTgc-22B.1.5960.000174
ORF1ab/nsp31502A1502TGctAct22B.1.5960.000174
ORF1ab/nsp31502A1502delGCT---22B.1.617.20.000008
ORF1ab/nsp31502A1502DgCtgAt22B.1.6210.000177
ORF1ab/nsp31502A1502VgCtgTt22P.70.008734
ORF1ab/nsp31502A1502YGCtTAt110.055556
ORF1ab/nsp31502A1502XGCTTAA110.055556
ORF1ab/nsp31502A1502EgCTgAA110.055556
ORF1ab/nsp31502A1502DgCtgAt110.055556
ORF1ab/nsp31502A1502AgcTgcA110.055556
ORF1ab/nsp31502A1502AgcTgcC11A0.000387
ORF1ab/nsp31502A1502AgcTgcC11A.2.50.000499
ORF1ab/nsp31502A1502VgCtgTt11A.2.5.10.004808
ORF1ab/nsp31502A1502VgCtgTt11A.280.002646
ORF1ab/nsp31502A1502VgCtgTt11A.300.142857
ORF1ab/nsp31502A1502delGCT---11AD.20.000219
ORF1ab/nsp31502A1502RGCtCGt11All0
ORF1ab/nsp31502A1502XGCTTAA11All0
ORF1ab/nsp31502A1502delGCT---11AY.1010.00049
ORF1ab/nsp31502A1502del1gcTgc-11AY.1030.000006
ORF1ab/nsp31502A1502SGctTct11AY.1030.000006
ORF1ab/nsp31502A1502VgCtgTt11AY.1060.000335
ORF1ab/nsp31502A1502delGCT---11AY.1080.001103
ORF1ab/nsp31502A1502AgcTgcC11AY.1080.001103
ORF1ab/nsp31502A1502AgcTgcC11AY.1140.000231
ORF1ab/nsp31502A1502PGctCct11AY.1180.000063
ORF1ab/nsp31502A1502AgcTgcC11AY.1180.000063
ORF1ab/nsp31502A1502AgcTgcG11AY.1190.000035
ORF1ab/nsp31502A1502GgCtgGt11AY.120.000316
ORF1ab/nsp31502A1502VgCtgTt11AY.120.000316
ORF1ab/nsp31502A1502VgCtgTt11AY.1200.000037
ORF1ab/nsp31502A1502DgCtgAt11AY.1200.000037
ORF1ab/nsp31502A1502delGCT---11AY.1200.000037
ORF1ab/nsp31502A1502AgcTgcC11AY.1210.000135
ORF1ab/nsp31502A1502VgCtgTt11AY.1210.000135
ORF1ab/nsp31502A1502VgCtgTt11AY.140.000088
ORF1ab/nsp31502A1502TGctAct11AY.230.00007
ORF1ab/nsp31502A1502VgCtgTt11AY.230.00007
ORF1ab/nsp31502A1502AgcTgcG11AY.250.000006
ORF1ab/nsp31502A1502del1gcTgc-11AY.250.000006
ORF1ab/nsp31502A1502VgCtgTt11AY.260.000028
ORF1ab/nsp31502A1502VgCtgTt11AY.270.000065
ORF1ab/nsp31502A1502delGCT---11AY.30.00001
ORF1ab/nsp31502A1502DgCtgAt11AY.320.000532
ORF1ab/nsp31502A1502AgcTgcC11AY.330.000067
ORF1ab/nsp31502A1502delGCT---11AY.330.000067
ORF1ab/nsp31502A1502VgCtgTt11AY.340.000097
ORF1ab/nsp31502A1502delGCT---11AY.360.000148
ORF1ab/nsp31502A1502VgCtgTt11AY.360.000148
ORF1ab/nsp31502A1502AgcTgcC11AY.360.000148
ORF1ab/nsp31502A1502DgCtgAt11AY.380.000499
ORF1ab/nsp31502A1502AgcTgcC11AY.380.000499
ORF1ab/nsp31502A1502TGctAct11AY.390.000025
ORF1ab/nsp31502A1502TGctAct11AY.39.10.00004
ORF1ab/nsp31502A1502VgCtgTt11AY.39.10.00004
ORF1ab/nsp31502A1502VgCtgTt11AY.4.2.10.000149
ORF1ab/nsp31502A1502delGCT---11AY.4.30.000842
ORF1ab/nsp31502A1502VgCtgTt11AY.4.40.000409
ORF1ab/nsp31502A1502VgCtgTt11AY.4.50.000107
ORF1ab/nsp31502A1502delGCT---11AY.420.00004
ORF1ab/nsp31502A1502TGctAct11AY.420.00004
ORF1ab/nsp31502A1502AgcTgcC11AY.420.00004
ORF1ab/nsp31502A1502DgCtgAt11AY.420.00004
ORF1ab/nsp31502A1502del1gcTgc-11AY.430.000004
ORF1ab/nsp31502A1502delGCT---11AY.440.000006
ORF1ab/nsp31502A1502AgcTgcC11AY.550.000917
ORF1ab/nsp31502A1502TGctAct11AY.60.000041
ORF1ab/nsp31502A1502VgCtgTt11AY.60.000041
ORF1ab/nsp31502A1502NGCtAAt11AY.600.000938
ORF1ab/nsp31502A1502GgCtgGt11AY.610.000105
ORF1ab/nsp31502A1502VgCtgTt11AY.610.000105
ORF1ab/nsp31502A1502AgcTgcA11AY.650.000533
ORF1ab/nsp31502A1502delGCT---11AY.660.00107
ORF1ab/nsp31502A1502delGCT---11AY.670.000464
ORF1ab/nsp31502A1502VgCtgTt11AY.70.000196
ORF1ab/nsp31502A1502AgcTgcC11AY.70.000196
ORF1ab/nsp31502A1502TGctAct11AY.75.10.00018
ORF1ab/nsp31502A1502delGCT---11AY.760.004831
ORF1ab/nsp31502A1502VgCtgTt11AY.770.001127
ORF1ab/nsp31502A1502SGctTct11AY.830.001724
ORF1ab/nsp31502A1502RGCtCGt11AY.840.000437
ORF1ab/nsp31502A1502VgCtgTt11AY.9.10.000084
ORF1ab/nsp31502A1502NGCtAAt11AY.9.20.000037
ORF1ab/nsp31502A1502AgcTgcC11AY.9.20.000037
ORF1ab/nsp31502A1502delGCT---11AY.9.20.000037
ORF1ab/nsp31502A1502VgCtgTt11AY.940.000443
ORF1ab/nsp31502A1502del1gcTgc-11AY.960.002075
ORF1ab/nsp31502A1502delGCT---11AY.990.001049
ORF1ab/nsp31502A1502delGCT---11AY.99.10.001553
ORF1ab/nsp31502A1502SGctTct11AY.99.20.000092
ORF1ab/nsp31502A1502TGctAct11B0.000128
ORF1ab/nsp31502A1502VgCtgTt11B0.000128
ORF1ab/nsp31502A1502delGCT---11B0.000128
ORF1ab/nsp31502A1502TGctAct11B.10.000009
ORF1ab/nsp31502A1502delGCT---11B.1.10.000018
ORF1ab/nsp31502A1502del1gcTgc-11B.1.10.000018
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.1410.002012
ORF1ab/nsp31502A1502PGctCct11B.1.1.1570.000913
ORF1ab/nsp31502A1502AgcTgcC11B.1.1.1770.019231
ORF1ab/nsp31502A1502TGctAct11B.1.1.2140.000055
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.2140.000055
ORF1ab/nsp31502A1502TGctAct11B.1.1.2220.000204
ORF1ab/nsp31502A1502SGctTct11B.1.1.2410.00207
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.2660.012195
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.2890.002083
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.3060.000438
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.3120.001912
ORF1ab/nsp31502A1502SGctTct11B.1.1.3550.015385
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.3690.000446
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.370.000193
ORF1ab/nsp31502A1502delGCT---11B.1.1.370.000193
ORF1ab/nsp31502A1502TGctAct11B.1.1.3890.006061
ORF1ab/nsp31502A1502del1GcTRc-11B.1.1.4110.014706
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.4320.001266
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.4340.000349
ORF1ab/nsp31502A1502delGCT---11B.1.1.460.004367
ORF1ab/nsp31502A1502delGCT---11B.1.1.4640.001473
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.4860.001577
ORF1ab/nsp31502A1502VgCtgTt11B.1.1.5190.00004
ORF1ab/nsp31502A1502AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp31502A1502YGCtTAt11B.1.1.5190.00004
ORF1ab/nsp31502A1502delGCT---11B.1.1.5250.005464
ORF1ab/nsp31502A1502PGctCct11B.1.1.70.000001
ORF1ab/nsp31502A1502AgcTgcC11B.1.1.700.000341
ORF1ab/nsp31502A1502AgcTgcC11B.1.160.150.00495
ORF1ab/nsp31502A1502VgCtgTt11B.1.160.160.000929
ORF1ab/nsp31502A1502AgcTgcC11B.1.1770.000013
ORF1ab/nsp31502A1502SGctTct11B.1.1770.000013
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.430.001477
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.450.000381
ORF1ab/nsp31502A1502TGctAct11B.1.177.500.004695
ORF1ab/nsp31502A1502AgcTgcC11B.1.177.600.000218
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.70.000165
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.730.000566
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.770.000726
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.80.000752
ORF1ab/nsp31502A1502VgCtgTt11B.1.177.810.000189
ORF1ab/nsp31502A1502AgcTgcC11B.1.177.90.001332
ORF1ab/nsp31502A1502SGctTct11B.1.20.000009
ORF1ab/nsp31502A1502DgCtgAt11B.1.20.000009
ORF1ab/nsp31502A1502EgCTgAG11B.1.20.000009
ORF1ab/nsp31502A1502TGctAct11B.1.2210.000071
ORF1ab/nsp31502A1502del1gcTgc-11B.1.2210.000071
ORF1ab/nsp31502A1502VgCtgTt11B.1.2320.000537
ORF1ab/nsp31502A1502AgcTgcC11B.1.2320.000537
ORF1ab/nsp31502A1502SGctTct11B.1.2340.000132
ORF1ab/nsp31502A1502AgcTgcC11B.1.2340.000132
ORF1ab/nsp31502A1502VgCtgTt11B.1.2400.000216
ORF1ab/nsp31502A1502TGctAct11B.1.2430.00007
ORF1ab/nsp31502A1502del1gcTgc-11B.1.2430.00007
ORF1ab/nsp31502A1502AgcTgcC11B.1.2580.000067
ORF1ab/nsp31502A1502VgCtgTt11B.1.258.110.000396
ORF1ab/nsp31502A1502delGCT---11B.1.2650.001271
ORF1ab/nsp31502A1502del1gcTgc-11B.1.3290.000608
ORF1ab/nsp31502A1502AgcTgcC11B.1.3490.000715
ORF1ab/nsp31502A1502TGctAct11B.1.3510.00003
ORF1ab/nsp31502A1502SGctTct11B.1.3510.00003
ORF1ab/nsp31502A1502VgCtgTt11B.1.351.20.000303
ORF1ab/nsp31502A1502VgCtgTt11B.1.360.000146
ORF1ab/nsp31502A1502VgCtgTt11B.1.36.180.00042
ORF1ab/nsp31502A1502TGctAct11B.1.36.350.002604
ORF1ab/nsp31502A1502AgcTgcC11B.1.36.80.001
ORF1ab/nsp31502A1502AgcTgcA11B.1.3670.000792
ORF1ab/nsp31502A1502delGCT---11B.1.416.10.001563
ORF1ab/nsp31502A1502YGCtTAt11B.1.4270.00005
ORF1ab/nsp31502A1502TGctAct11B.1.4270.00005
ORF1ab/nsp31502A1502SGctTct11B.1.4290.000024
ORF1ab/nsp31502A1502TGctAct11B.1.4290.000024
ORF1ab/nsp31502A1502YGCtTAt11B.1.4290.000024
ORF1ab/nsp31502A1502delGCT---11B.1.4530.003236
ORF1ab/nsp31502A1502VgCtgTt11B.1.4560.003268
ORF1ab/nsp31502A1502SGctTct11B.1.4560.003268
ORF1ab/nsp31502A1502del1gcTgc-11B.1.466.20.000391
ORF1ab/nsp31502A1502AgcTgcC11B.1.4970.000315
ORF1ab/nsp31502A1502VgCtgTt11B.1.4990.00105
ORF1ab/nsp31502A1502DgCtgAt11B.1.5250.000113
ORF1ab/nsp31502A1502delGCT---11B.1.5260.000024
ORF1ab/nsp31502A1502delGCT---11B.1.5330.009615
ORF1ab/nsp31502A1502AgcTgcC11B.1.5510.00129
ORF1ab/nsp31502A1502VgCtgTt11B.1.564.10.001577
ORF1ab/nsp31502A1502delGCT---11B.1.5770.000687
ORF1ab/nsp31502A1502VgCtgTt11B.1.5960.000087
ORF1ab/nsp31502A1502VgCtgTt11B.1.617.10.000129
ORF1ab/nsp31502A1502delGCT---11B.1.617.10.000129
ORF1ab/nsp31502A1502DgCtgAt11B.1.617.20.000004
ORF1ab/nsp31502A1502SGctTct11B.1.617.20.000004
ORF1ab/nsp31502A1502SGctTct11B.1.619.10.000641
ORF1ab/nsp31502A1502SGctTct11B.1.6210.000089
ORF1ab/nsp31502A1502delGCT---11B.1.6210.000089
ORF1ab/nsp31502A1502VgCtgTt11B.1.6280.000352
ORF1ab/nsp31502A1502TGctAct11B.1.6310.003367
ORF1ab/nsp31502A1502TGctAct11B.400.000364
ORF1ab/nsp31502A1502VgCtgTt11C.350.000774
ORF1ab/nsp31502A1502TGctAct11D.20.000075
ORF1ab/nsp31502A1502AgcTgcC11D.20.000075
ORF1ab/nsp31502A1502AgcTgcC11N.10.016949
ORF1ab/nsp31502A1502VgCtgTt11N.100.029412
ORF1ab/nsp31502A1502del1gcTgc-11P.10.000016
ORF1ab/nsp31502A1502AgcTgcC11P.10.000016
ORF1ab/nsp31502A1502delGCT---11P.1.150.000232
ORF1ab/nsp31502A1502VgCtgTt11P.1.150.000232
ORF1ab/nsp31502A1502VgCtgTt11Q.10.000126
ORF1ab/nsp31502A1502YGCtTAt11Q.30.000145
ORF1ab/nsp31502A1502AgcTgcC11Q.30.000145
ORF1ab/nsp31502A1502TGctAct11Q.30.000145
ORF1ab/nsp31502A1502VgCtgTt11Q.70.001111
ORF1ab/nsp31502A1502SGctTct11Q.70.001111
ORF1ab/nsp31502A1502AgcTgcG11Q.80.000165
ORF1ab/nsp31502A1502AgcTgcC11R.10.00009