CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1481

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31481D1481DD2299DsyngaCgaT5166516617160-7162
ORF1ab/nsp31481D1481ED2299EnonsyngaCgaA110010670.977160-7162
ORF1ab/nsp31481D1481ED2299EnonsyngaCgaG1100330.037160-7162
ORF1ab/nsp31481D1481ND2299NnonsynGacAac6646630.9984947160-7162
ORF1ab/nsp31481D1481ND2299NnonsynGaCAaT66410.001506027160-7162
ORF1ab/nsp31481D1481GD2299GnonsyngAcgGc1601580.98757160-7162
ORF1ab/nsp31481D1481GD2299GnonsyngACgGT16020.01257160-7162
ORF1ab/nsp31481D1481YD2299YnonsynGacTac1541510.9805197160-7162
ORF1ab/nsp31481D1481YD2299YnonsynGaCTaT15430.01948057160-7162
ORF1ab/nsp31481D1481HD2299HnonsynGacCac13113117160-7162
ORF1ab/nsp31481D1481delD2299deldelGAC---10310317160-7162
ORF1ab/nsp31481D1481AD2299AnonsyngAcgCc18170.9444447160-7162
ORF1ab/nsp31481D1481AD2299AnonsyngACgCT1810.05555567160-7162
ORF1ab/nsp31481D1481VD2299VnonsyngAcgTc980.8888897160-7162
ORF1ab/nsp31481D1481VD2299VnonsyngACgTT910.1111117160-7162
ORF1ab/nsp31481D1481SD2299SnonsynGAcAGc640.6666677160-7162
ORF1ab/nsp31481D1481SD2299SnonsynGACTCT610.1666677160-7162
ORF1ab/nsp31481D1481SD2299SnonsynGAcTCc610.1666677160-7162
ORF1ab/nsp31481D1481ID2299InonsynGAcATc2217160-7162
ORF1ab/nsp31481D1481FD2299FnonsynGACTTT210.57160-7162
ORF1ab/nsp31481D1481FD2299FnonsynGAcTTc210.57160-7162
ORF1ab/nsp31481D1481CD2299CnonsynGACTGT210.57160-7162
ORF1ab/nsp31481D1481CD2299CnonsynGAcTGc210.57160-7162
ORF1ab/nsp31481D1481del2D2299del2delgACg--210.57160-7162
ORF1ab/nsp31481D1481del2D2299del2delGAc--c210.57160-7162
ORF1ab/nsp31481D1481del1D2299del1delgaCga-210.57160-7162
ORF1ab/nsp31481D1481del1D2299del1delGac-ac210.57160-7162
ORF1ab/nsp31481D1481XD2299XnonsynGaCTaA1117160-7162
ORF1ab/nsp31481D1481KD2299KnonsynGaCAaA1117160-7162
ORF1ab/nsp31481D1481TD2299TnonsynGAcACc1117160-7162

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31481D1481DgaCgaT51665166All0.000988
ORF1ab/nsp31481D1481EgaCgaA10671100All0.000204
ORF1ab/nsp31481D1481EgaCgaG331100All0.000006
ORF1ab/nsp31481D1481DgaCgaT10071007B.1.1.70.000901
ORF1ab/nsp31481D1481EgaCgaA886886AY.430.003925
ORF1ab/nsp31481D1481NGacAac663664All0.000127
ORF1ab/nsp31481D1481NGaCAaT1664All0
ORF1ab/nsp31481D1481DgaCgaT427427AY.40.000665
ORF1ab/nsp31481D1481NGacAac348348B.1.4290.008188
ORF1ab/nsp31481D1481DgaCgaT330330B.1.360.048147
ORF1ab/nsp31481D1481DgaCgaT260260B.1.20.002289
ORF1ab/nsp31481D1481DgaCgaT237237D.20.017785
ORF1ab/nsp31481D1481DgaCgaT197197AY.430.000873
ORF1ab/nsp31481D1481DgaCgaT194194B.1.617.20.00073
ORF1ab/nsp31481D1481DgaCgaT170170AY.250.001023
ORF1ab/nsp31481D1481DgaCgaT169169B.1.258.170.017571
ORF1ab/nsp31481D1481DgaCgaT163163AY.420.006558
ORF1ab/nsp31481D1481GgAcgGc158160All0.00003
ORF1ab/nsp31481D1481GgACgGT2160All0
ORF1ab/nsp31481D1481YGacTac151154All0.000029
ORF1ab/nsp31481D1481YGaCTaT3154All0.000001
ORF1ab/nsp31481D1481HGacCac131131All0.000025
ORF1ab/nsp31481D1481EgaCgaA90120AY.40.00014
ORF1ab/nsp31481D1481EgaCgaG30120AY.40.000047
ORF1ab/nsp31481D1481delGAC---103103All0.00002
ORF1ab/nsp31481D1481GgAcgGc103103AY.40.00016
ORF1ab/nsp31481D1481DgaCgaT9393AY.440.000566
ORF1ab/nsp31481D1481DgaCgaT9090P.1.140.004302
ORF1ab/nsp31481D1481DgaCgaT8383AY.1020.002201
ORF1ab/nsp31481D1481DgaCgaT8282AY.1030.000509
ORF1ab/nsp31481D1481DgaCgaT7171AY.46.40.01168
ORF1ab/nsp31481D1481DgaCgaT6666B.10.000605
ORF1ab/nsp31481D1481DgaCgaT6666B.1.1.5190.002621
ORF1ab/nsp31481D1481NGacAac5960B.1.1.70.000053
ORF1ab/nsp31481D1481NGaCAaT160B.1.1.70.000001
ORF1ab/nsp31481D1481DgaCgaT5959B.1.10.00107
ORF1ab/nsp31481D1481DgaCgaT5252B.1.2230.144444
ORF1ab/nsp31481D1481DgaCgaT5151P.10.000803
ORF1ab/nsp31481D1481DgaCgaT5050AY.30.000497
ORF1ab/nsp31481D1481DgaCgaT4949B.1.5260.001152
ORF1ab/nsp31481D1481DgaCgaT4646B.1.177.540.027896
ORF1ab/nsp31481D1481DgaCgaT4646B.1.2580.003061
ORF1ab/nsp31481D1481DgaCgaT4444B.1.1770.000579
ORF1ab/nsp31481D1481DgaCgaT3939AY.4.50.004192
ORF1ab/nsp31481D1481DgaCgaT3939B.1.1.1700.048628
ORF1ab/nsp31481D1481DgaCgaT3535B.1.177.40.007387
ORF1ab/nsp31481D1481NGacAac3434B.1.177.160.022591
ORF1ab/nsp31481D1481DgaCgaT3131AY.1000.001426
ORF1ab/nsp31481D1481NGacAac3131AY.290.000489
ORF1ab/nsp31481D1481DgaCgaT3030AY.290.000473
ORF1ab/nsp31481D1481YGacTac2929AY.40.000045
ORF1ab/nsp31481D1481delGAC---2828B.1.1.70.000025
ORF1ab/nsp31481D1481HGacCac2525AY.360.003705
ORF1ab/nsp31481D1481DgaCgaT2323AY.5.30.00776
ORF1ab/nsp31481D1481GgAcgGc2323B.1.1.70.000021
ORF1ab/nsp31481D1481DgaCgaT2222AD.20.004817
ORF1ab/nsp31481D1481YGacTac2222AY.250.000132
ORF1ab/nsp31481D1481NGacAac2222AY.39.10.000871
ORF1ab/nsp31481D1481DgaCgaT2222AY.4.20.000477
ORF1ab/nsp31481D1481DgaCgaT2222AY.5.40.006087
ORF1ab/nsp31481D1481DgaCgaT2222C.370.002553
ORF1ab/nsp31481D1481DgaCgaT2121B.1.4290.000494
ORF1ab/nsp31481D1481YGacTac2121B.1.4290.000494
ORF1ab/nsp31481D1481DgaCgaT2020AY.1200.000744
ORF1ab/nsp31481D1481DgaCgaT2020AY.9.20.000735
ORF1ab/nsp31481D1481NGacAac2020B.1.617.20.000075
ORF1ab/nsp31481D1481DgaCgaT1919B.1.1.2220.003876
ORF1ab/nsp31481D1481DgaCgaT1919B.1.1600.000593
ORF1ab/nsp31481D1481AgAcgCc1718All0.000003
ORF1ab/nsp31481D1481AgACgCT118All0
ORF1ab/nsp31481D1481DgaCgaT1818AY.260.00051
ORF1ab/nsp31481D1481DgaCgaT1818B.1.3510.000535
ORF1ab/nsp31481D1481DgaCgaT1818B.1.5960.001568
ORF1ab/nsp31481D1481DgaCgaT1818C.360.016393
ORF1ab/nsp31481D1481EgaCgaA1717AY.1030.000106
ORF1ab/nsp31481D1481NGacAac1717AY.29.10.003749
ORF1ab/nsp31481D1481DgaCgaT1717AY.750.000952
ORF1ab/nsp31481D1481DgaCgaT1717B.1.1.2140.000943
ORF1ab/nsp31481D1481DgaCgaT1717B.1.1.2690.023004
ORF1ab/nsp31481D1481DgaCgaT1616AY.240.006897
ORF1ab/nsp31481D1481YGacTac1616B.1.1.70.000014
ORF1ab/nsp31481D1481DgaCgaT1414AY.1190.000494
ORF1ab/nsp31481D1481DgaCgaT1414AY.200.000544
ORF1ab/nsp31481D1481HGacCac1414AY.50.000289
ORF1ab/nsp31481D1481DgaCgaT1414AY.60.000576
ORF1ab/nsp31481D1481DgaCgaT1414B.1.2430.000974
ORF1ab/nsp31481D1481HGacCac1313B.1.1.70.000012
ORF1ab/nsp31481D1481DgaCgaT1313B.1.2210.000923
ORF1ab/nsp31481D1481DgaCgaT1212AY.850.005126
ORF1ab/nsp31481D1481DgaCgaT1212B.1.177.350.008293
ORF1ab/nsp31481D1481DgaCgaT1212B.1.6120.03183
ORF1ab/nsp31481D1481DgaCgaT1111AY.470.000342
ORF1ab/nsp31481D1481EgaCgaA911B.1.617.20.000034
ORF1ab/nsp31481D1481EgaCgaG211B.1.617.20.000008
ORF1ab/nsp31481D1481DgaCgaT1010AY.120.10.00321
ORF1ab/nsp31481D1481DgaCgaT1010AY.390.000247
ORF1ab/nsp31481D1481DgaCgaT1010B.1.1.3920.526316
ORF1ab/nsp31481D1481DgaCgaT1010B.1.3910.011274
ORF1ab/nsp31481D1481VgAcgTc89All0.000002
ORF1ab/nsp31481D1481VgACgTT19All0
ORF1ab/nsp31481D1481NGacAac99AY.250.000054
ORF1ab/nsp31481D1481NGacAac99AY.40.000014
ORF1ab/nsp31481D1481NGacAac99B.1.1600.000281
ORF1ab/nsp31481D1481YGacTac99B.1.1770.000119
ORF1ab/nsp31481D1481EgaCgaA99B.1.2210.000639
ORF1ab/nsp31481D1481NGacAac99B.1.4270.000454
ORF1ab/nsp31481D1481HGacCac99B.1.4290.000212
ORF1ab/nsp31481D1481DgaCgaT99Q.10.001137
ORF1ab/nsp31481D1481YGacTac88B.10.000073
ORF1ab/nsp31481D1481NGacAac88B.1.20.00007
ORF1ab/nsp31481D1481DgaCgaT88B.1.2340.001056
ORF1ab/nsp31481D1481DgaCgaT88P.1.10.002541
ORF1ab/nsp31481D1481EgaCgaA77AY.250.000042
ORF1ab/nsp31481D1481DgaCgaT77AY.330.000467
ORF1ab/nsp31481D1481HGacCac77AY.40.000011
ORF1ab/nsp31481D1481DgaCgaT77AY.46.60.000505
ORF1ab/nsp31481D1481delGAC---77B.10.000064
ORF1ab/nsp31481D1481NGacAac77B.10.000064
ORF1ab/nsp31481D1481HGacCac77B.1.1.630.002701
ORF1ab/nsp31481D1481EgaCgaA77B.1.1.70.000006
ORF1ab/nsp31481D1481delGAC---77B.1.1770.000092
ORF1ab/nsp31481D1481DgaCgaT77B.1.177.210.000535
ORF1ab/nsp31481D1481DgaCgaT77B.1.177.420.006261
ORF1ab/nsp31481D1481DgaCgaT77B.1.177.620.008343
ORF1ab/nsp31481D1481DgaCgaT77B.1.4270.000353
ORF1ab/nsp31481D1481SGAcAGc460.222222
ORF1ab/nsp31481D1481SGACTCT160.055556
ORF1ab/nsp31481D1481SGAcTCc160.055556
ORF1ab/nsp31481D1481SGAcAGc46All0.000001
ORF1ab/nsp31481D1481SGAcTCc16All0
ORF1ab/nsp31481D1481SGACTCT16All0
ORF1ab/nsp31481D1481NGacAac66AY.1030.000037
ORF1ab/nsp31481D1481DgaCgaT66AY.1170.000507
ORF1ab/nsp31481D1481DgaCgaT66AY.98.10.000291
ORF1ab/nsp31481D1481DgaCgaT66B.1.2320.003224
ORF1ab/nsp31481D1481HGacCac66B.1.4270.000303
ORF1ab/nsp31481D1481NGacAac66B.1.5510.007742
ORF1ab/nsp31481D1481NGacAac66P.10.000095
ORF1ab/nsp31481D1481YGacTac350.166667
ORF1ab/nsp31481D1481YGaCTaT250.111111
ORF1ab/nsp31481D1481EgaCgaA55AY.23.10.002087
ORF1ab/nsp31481D1481NGacAac55AY.30.00005
ORF1ab/nsp31481D1481DgaCgaT55AY.3.10.000426
ORF1ab/nsp31481D1481DgaCgaT55AY.340.000485
ORF1ab/nsp31481D1481NGacAac55AY.440.00003
ORF1ab/nsp31481D1481HGacCac55AY.440.00003
ORF1ab/nsp31481D1481NGacAac55B.1.177.430.007386
ORF1ab/nsp31481D1481DgaCgaT55B.1.177.450.001906
ORF1ab/nsp31481D1481DgaCgaT55B.1.177.600.001092
ORF1ab/nsp31481D1481DgaCgaT55B.1.2060.004078
ORF1ab/nsp31481D1481DgaCgaT55B.1.36.100.023923
ORF1ab/nsp31481D1481GgAcgGc340.166667
ORF1ab/nsp31481D1481GgACgGT140.055556
ORF1ab/nsp31481D1481DgaCgaT44AY.1210.000541
ORF1ab/nsp31481D1481DgaCgaT44AY.270.000259
ORF1ab/nsp31481D1481HGacCac44AY.30.00004
ORF1ab/nsp31481D1481delGAC---44AY.40.000006
ORF1ab/nsp31481D1481NGacAac44AY.430.000018
ORF1ab/nsp31481D1481DgaCgaT44AY.50.000083
ORF1ab/nsp31481D1481DgaCgaT44AY.9.10.000335
ORF1ab/nsp31481D1481EgaCgaA34B.10.000027
ORF1ab/nsp31481D1481EgaCgaG14B.10.000009
ORF1ab/nsp31481D1481DgaCgaT44B.1.1.10.001307
ORF1ab/nsp31481D1481delGAC---44B.1.1.2180.030769
ORF1ab/nsp31481D1481DgaCgaT44B.1.1.3480.003185
ORF1ab/nsp31481D1481DgaCgaT44B.1.1280.002541
ORF1ab/nsp31481D1481DgaCgaT44B.1.1460.016949
ORF1ab/nsp31481D1481NGacAac44B.1.1770.000053
ORF1ab/nsp31481D1481NGacAac44B.1.2790.002054
ORF1ab/nsp31481D1481NGacAac44B.1.360.000584
ORF1ab/nsp31481D1481NGacAac44B.1.36.70.016
ORF1ab/nsp31481D1481DgaCgaT44B.1.3990.007737
ORF1ab/nsp31481D1481HGacCac44B.1.438.10.000429
ORF1ab/nsp31481D1481DgaCgaT44B.1.6370.000292
ORF1ab/nsp31481D1481DgaCgaT44P.20.000747
ORF1ab/nsp31481D1481DgaCgaT44R.10.00036
ORF1ab/nsp31481D1481GgAcgGc33A0.001161
ORF1ab/nsp31481D1481EgaCgaA33AY.1020.00008
ORF1ab/nsp31481D1481HGacCac33AY.1030.000019
ORF1ab/nsp31481D1481EgaCgaA33AY.1180.000188
ORF1ab/nsp31481D1481DgaCgaT33AY.230.000209
ORF1ab/nsp31481D1481DgaCgaT33AY.39.10.000119
ORF1ab/nsp31481D1481YGacTac33AY.430.000013
ORF1ab/nsp31481D1481AgAcgCc33AY.430.000013
ORF1ab/nsp31481D1481DgaCgaT33AY.460.000312
ORF1ab/nsp31481D1481DgaCgaT33AY.510.002727
ORF1ab/nsp31481D1481DgaCgaT33AY.610.000314
ORF1ab/nsp31481D1481DgaCgaT33AY.730.001996
ORF1ab/nsp31481D1481DgaCgaT33AY.840.001312
ORF1ab/nsp31481D1481DgaCgaT33AY.880.002653
ORF1ab/nsp31481D1481DgaCgaT33AY.90.000203
ORF1ab/nsp31481D1481DgaCgaT33AY.980.000237
ORF1ab/nsp31481D1481HGacCac33B.10.000027
ORF1ab/nsp31481D1481delGAC---33B.1.10.000054
ORF1ab/nsp31481D1481DgaCgaT33B.1.1.1280.021277
ORF1ab/nsp31481D1481AgAcgCc33B.1.1.2140.000166
ORF1ab/nsp31481D1481DgaCgaT33B.1.1.3690.001339
ORF1ab/nsp31481D1481DgaCgaT33B.1.1.710.018182
ORF1ab/nsp31481D1481DgaCgaT33B.1.177.800.005736
ORF1ab/nsp31481D1481DgaCgaT33B.1.177.860.00055
ORF1ab/nsp31481D1481YGacTac33B.1.20.000026
ORF1ab/nsp31481D1481DgaCgaT33B.1.36.170.001482
ORF1ab/nsp31481D1481GgAcgGc33B.1.4290.000071
ORF1ab/nsp31481D1481DgaCgaT33B.1.466.20.001174
ORF1ab/nsp31481D1481HGacCac33B.1.5260.000071
ORF1ab/nsp31481D1481EgaCgaA33B.1.5700.008824
ORF1ab/nsp31481D1481DgaCgaT33B.1.5950.000783
ORF1ab/nsp31481D1481DgaCgaT33B.1.6090.001438
ORF1ab/nsp31481D1481GgAcgGc33B.1.617.20.000011
ORF1ab/nsp31481D1481delGAC---33B.1.617.20.000011
ORF1ab/nsp31481D1481DgaCgaT33C.140.012987
ORF1ab/nsp31481D1481YGacTac33P.10.000047
ORF1ab/nsp31481D1481HGacCac33P.10.000047
ORF1ab/nsp31481D1481DgaCgaT33Q.80.000495
ORF1ab/nsp31481D1481DgaCgaT220.111111
ORF1ab/nsp31481D1481delGAC---220.111111
ORF1ab/nsp31481D1481NGacAac220.111111
ORF1ab/nsp31481D1481AgACgCT120.055556
ORF1ab/nsp31481D1481VgACgTT120.055556
ORF1ab/nsp31481D1481FGAcTTc120.055556
ORF1ab/nsp31481D1481FGACTTT120.055556
ORF1ab/nsp31481D1481CGAcTGc120.055556
ORF1ab/nsp31481D1481VgAcgTc120.055556
ORF1ab/nsp31481D1481AgAcgCc120.055556
ORF1ab/nsp31481D1481CGACTGT120.055556
ORF1ab/nsp31481D1481NGacAac22AD.20.000438
ORF1ab/nsp31481D1481IGAcATc22All0
ORF1ab/nsp31481D1481FGACTTT12All0
ORF1ab/nsp31481D1481CGACTGT12All0
ORF1ab/nsp31481D1481CGAcTGc12All0
ORF1ab/nsp31481D1481del2gACg--12All0
ORF1ab/nsp31481D1481del2GAc--c12All0
ORF1ab/nsp31481D1481del1gaCga-12All0
ORF1ab/nsp31481D1481del1Gac-ac12All0
ORF1ab/nsp31481D1481FGAcTTc12All0
ORF1ab/nsp31481D1481NGacAac22AY.1060.00067
ORF1ab/nsp31481D1481DgaCgaT22AY.1130.000285
ORF1ab/nsp31481D1481DgaCgaT22AY.1140.000462
ORF1ab/nsp31481D1481DgaCgaT22AY.34.10.00102
ORF1ab/nsp31481D1481DgaCgaT22AY.350.000466
ORF1ab/nsp31481D1481DgaCgaT22AY.360.000296
ORF1ab/nsp31481D1481GgAcgGc22AY.4.50.000215
ORF1ab/nsp31481D1481delGAC---22AY.4.50.000215
ORF1ab/nsp31481D1481delGAC---22AY.430.000009
ORF1ab/nsp31481D1481YGacTac22AY.440.000012
ORF1ab/nsp31481D1481EgaCgaA22AY.440.000012
ORF1ab/nsp31481D1481DgaCgaT22AY.46.10.002053
ORF1ab/nsp31481D1481DgaCgaT22AY.540.000191
ORF1ab/nsp31481D1481DgaCgaT22AY.690.000373
ORF1ab/nsp31481D1481DgaCgaT22AY.70.000392
ORF1ab/nsp31481D1481DgaCgaT22AY.700.000417
ORF1ab/nsp31481D1481NGacAac22AY.9.10.000167
ORF1ab/nsp31481D1481EgaCgaA22AY.99.20.000184
ORF1ab/nsp31481D1481YGacTac22B0.000256
ORF1ab/nsp31481D1481GgAcgGc22B.10.000018
ORF1ab/nsp31481D1481NGacAac22B.1.10.000036
ORF1ab/nsp31481D1481NGacAac22B.1.1.1640.010309
ORF1ab/nsp31481D1481DgaCgaT22B.1.1.2160.001781
ORF1ab/nsp31481D1481DgaCgaT22B.1.1.2410.004141
ORF1ab/nsp31481D1481DgaCgaT22B.1.1.2790.002242
ORF1ab/nsp31481D1481DgaCgaT22B.1.1.3540.008772
ORF1ab/nsp31481D1481DgaCgaT22B.1.1.3750.02381
ORF1ab/nsp31481D1481HGacCac22B.1.1.5190.000079
ORF1ab/nsp31481D1481DgaCgaT22B.1.1.610.017544
ORF1ab/nsp31481D1481DgaCgaT22B.1.1.630.000772
ORF1ab/nsp31481D1481AgAcgCc22B.1.1.70.000002
ORF1ab/nsp31481D1481YGacTac22B.1.1600.000062
ORF1ab/nsp31481D1481DgaCgaT22B.1.177.560.001335
ORF1ab/nsp31481D1481delGAC---22B.1.177.620.002384
ORF1ab/nsp31481D1481DgaCgaT22B.1.177.810.000379
ORF1ab/nsp31481D1481GgAcgGc22B.1.20.000018
ORF1ab/nsp31481D1481DgaCgaT22B.1.36.220.002415
ORF1ab/nsp31481D1481DgaCgaT22B.1.36.290.001035
ORF1ab/nsp31481D1481EgaCgaA22B.1.3690.00057
ORF1ab/nsp31481D1481delGAC---22B.1.4110.007407
ORF1ab/nsp31481D1481GgAcgGc22B.1.4270.000101
ORF1ab/nsp31481D1481NGacAac22B.1.4280.002041
ORF1ab/nsp31481D1481DgaCgaT22B.1.5250.000226
ORF1ab/nsp31481D1481DgaCgaT22B.1.5460.007407
ORF1ab/nsp31481D1481DgaCgaT22B.1.5750.000607
ORF1ab/nsp31481D1481delGAC---22B.1.5960.000174
ORF1ab/nsp31481D1481DgaCgaT22B.1.617.10.000258
ORF1ab/nsp31481D1481YGacTac22B.1.617.20.000008
ORF1ab/nsp31481D1481DgaCgaT22B.1.6210.000177
ORF1ab/nsp31481D1481YGacTac22B.1.6210.000177
ORF1ab/nsp31481D1481HGacCac22B.1.6370.000146
ORF1ab/nsp31481D1481delGAC---22C.350.001548
ORF1ab/nsp31481D1481GgAcgGc22P.1.10.000635
ORF1ab/nsp31481D1481DgaCgaT22P.1.150.000465
ORF1ab/nsp31481D1481DgaCgaT22P.1.170.000324
ORF1ab/nsp31481D1481EgaCgaA110.055556
ORF1ab/nsp31481D1481XGaCTaA110.055556
ORF1ab/nsp31481D1481DgaCgaT11A0.000387
ORF1ab/nsp31481D1481del2GAc--c11A0.000387
ORF1ab/nsp31481D1481DgaCgaT11A.10.000282
ORF1ab/nsp31481D1481YGacTac11A.20.000662
ORF1ab/nsp31481D1481DgaCgaT11A.2.50.000499
ORF1ab/nsp31481D1481DgaCgaT11A.280.002646
ORF1ab/nsp31481D1481delGAC---11AD.20.000219
ORF1ab/nsp31481D1481HGacCac11AE.80.000489
ORF1ab/nsp31481D1481TGAcACc11All0
ORF1ab/nsp31481D1481KGaCAaA11All0
ORF1ab/nsp31481D1481XGaCTaA11All0
ORF1ab/nsp31481D1481delGAC---11AY.1010.00049
ORF1ab/nsp31481D1481AgAcgCc11AY.1030.000006
ORF1ab/nsp31481D1481delGAC---11AY.1030.000006
ORF1ab/nsp31481D1481YGacTac11AY.1030.000006
ORF1ab/nsp31481D1481DgaCgaT11AY.1060.000335
ORF1ab/nsp31481D1481delGAC---11AY.1080.001103
ORF1ab/nsp31481D1481YGacTac11AY.1100.000113
ORF1ab/nsp31481D1481GgAcgGc11AY.1110.000183
ORF1ab/nsp31481D1481YGacTac11AY.1110.000183
ORF1ab/nsp31481D1481AgAcgCc11AY.1110.000183
ORF1ab/nsp31481D1481DgaCgaT11AY.116.10.000311
ORF1ab/nsp31481D1481NGacAac11AY.1170.000085
ORF1ab/nsp31481D1481EgaCgaA11AY.1170.000085
ORF1ab/nsp31481D1481DgaCgaT11AY.1180.000063
ORF1ab/nsp31481D1481NGacAac11AY.1180.000063
ORF1ab/nsp31481D1481HGacCac11AY.1180.000063
ORF1ab/nsp31481D1481delGAC---11AY.1190.000035
ORF1ab/nsp31481D1481EgaCgaA11AY.1190.000035
ORF1ab/nsp31481D1481DgaCgaT11AY.120.000316
ORF1ab/nsp31481D1481delGAC---11AY.1200.000037
ORF1ab/nsp31481D1481EgaCgaA11AY.130.000161
ORF1ab/nsp31481D1481DgaCgaT11AY.130.000161
ORF1ab/nsp31481D1481EgaCgaA11AY.140.000088
ORF1ab/nsp31481D1481DgaCgaT11AY.160.00038
ORF1ab/nsp31481D1481HGacCac11AY.200.000039
ORF1ab/nsp31481D1481EgaCgaA11AY.200.000039
ORF1ab/nsp31481D1481DgaCgaT11AY.220.002092
ORF1ab/nsp31481D1481DgaCgaT11AY.23.10.000417
ORF1ab/nsp31481D1481GgAcgGc11AY.240.000431
ORF1ab/nsp31481D1481YGacTac11AY.240.000431
ORF1ab/nsp31481D1481AgAcgCc11AY.250.000006
ORF1ab/nsp31481D1481delGAC---11AY.250.000006
ORF1ab/nsp31481D1481EgaCgaA11AY.260.000028
ORF1ab/nsp31481D1481YGacTac11AY.270.000065
ORF1ab/nsp31481D1481HGacCac11AY.290.000016
ORF1ab/nsp31481D1481DgaCgaT11AY.29.10.000221
ORF1ab/nsp31481D1481YGacTac11AY.30.00001
ORF1ab/nsp31481D1481EgaCgaA11AY.30.00001
ORF1ab/nsp31481D1481DgaCgaT11AY.320.000532
ORF1ab/nsp31481D1481GgAcgGc11AY.330.000067
ORF1ab/nsp31481D1481YGacTac11AY.34.10.00051
ORF1ab/nsp31481D1481delGAC---11AY.360.000148
ORF1ab/nsp31481D1481YGacTac11AY.360.000148
ORF1ab/nsp31481D1481DgaCgaT11AY.370.000316
ORF1ab/nsp31481D1481DgaCgaT11AY.380.000499
ORF1ab/nsp31481D1481YGacTac11AY.390.000025
ORF1ab/nsp31481D1481EgaCgaA11AY.390.000025
ORF1ab/nsp31481D1481YGacTac11AY.39.10.00004
ORF1ab/nsp31481D1481AgAcgCc11AY.40.000002
ORF1ab/nsp31481D1481delGAC---11AY.4.30.000842
ORF1ab/nsp31481D1481DgaCgaT11AY.4.40.000409
ORF1ab/nsp31481D1481del1gaCga-11AY.4.50.000107
ORF1ab/nsp31481D1481HGacCac11AY.410.000294
ORF1ab/nsp31481D1481DgaCgaT11AY.410.000294
ORF1ab/nsp31481D1481del1Gac-ac11AY.430.000004
ORF1ab/nsp31481D1481GgAcgGc11AY.430.000004
ORF1ab/nsp31481D1481VgAcgTc11AY.430.000004
ORF1ab/nsp31481D1481HGacCac11AY.430.000004
ORF1ab/nsp31481D1481VgAcgTc11AY.440.000006
ORF1ab/nsp31481D1481GgAcgGc11AY.440.000006
ORF1ab/nsp31481D1481DgaCgaT11AY.450.000122
ORF1ab/nsp31481D1481NGacAac11AY.460.000104
ORF1ab/nsp31481D1481DgaCgaT11AY.46.20.000635
ORF1ab/nsp31481D1481DgaCgaT11AY.46.50.000198
ORF1ab/nsp31481D1481DgaCgaT11AY.480.000465
ORF1ab/nsp31481D1481NGacAac11AY.50.000021
ORF1ab/nsp31481D1481NGacAac11AY.540.000095
ORF1ab/nsp31481D1481delGAC---11AY.540.000095
ORF1ab/nsp31481D1481DgaCgaT11AY.550.000917
ORF1ab/nsp31481D1481delGAC---11AY.590.00053
ORF1ab/nsp31481D1481delGAC---11AY.600.000938
ORF1ab/nsp31481D1481DgaCgaT11AY.650.000533
ORF1ab/nsp31481D1481delGAC---11AY.660.00107
ORF1ab/nsp31481D1481YGacTac11AY.670.000464
ORF1ab/nsp31481D1481DgaCgaT11AY.670.000464
ORF1ab/nsp31481D1481DgaCgaT11AY.680.000274
ORF1ab/nsp31481D1481DgaCgaT11AY.7.10.000113
ORF1ab/nsp31481D1481GgAcgGc11AY.710.000475
ORF1ab/nsp31481D1481NGacAac11AY.730.000665
ORF1ab/nsp31481D1481HGacCac11AY.740.000116
ORF1ab/nsp31481D1481DgaCgaT11AY.780.001541
ORF1ab/nsp31481D1481YGaCTaT11AY.840.000437
ORF1ab/nsp31481D1481HGacCac11AY.90.000068
ORF1ab/nsp31481D1481delGAC---11AY.90.000068
ORF1ab/nsp31481D1481EgaCgaA11AY.9.20.000037
ORF1ab/nsp31481D1481GgAcgGc11AY.9.20.000037
ORF1ab/nsp31481D1481TGAcACc11AY.9.20.000037
ORF1ab/nsp31481D1481EgaCgaA11AY.9.2.10.001976
ORF1ab/nsp31481D1481YGacTac11AY.950.000761
ORF1ab/nsp31481D1481HGacCac11AY.950.000761
ORF1ab/nsp31481D1481EgaCgaA11AY.98.10.000048
ORF1ab/nsp31481D1481DgaCgaT11AY.990.001049
ORF1ab/nsp31481D1481HGacCac11AY.990.001049
ORF1ab/nsp31481D1481DgaCgaT11AY.99.10.001553
ORF1ab/nsp31481D1481DgaCgaT11AZ.20.000821
ORF1ab/nsp31481D1481DgaCgaT11B0.000128
ORF1ab/nsp31481D1481AgAcgCc11B0.000128
ORF1ab/nsp31481D1481NGacAac11B0.000128
ORF1ab/nsp31481D1481KGaCAaA11B.10.000009
ORF1ab/nsp31481D1481AgAcgCc11B.10.000009
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.1290.009174
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.1630.007634
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.1640.005155
ORF1ab/nsp31481D1481YGacTac11B.1.1.1740.003378
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.1860.003436
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.2050.003717
ORF1ab/nsp31481D1481HGacCac11B.1.1.250.000569
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.250.000569
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.2660.012195
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.280.000311
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.2940.001266
ORF1ab/nsp31481D1481NGacAac11B.1.1.2940.001266
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.2980.000862
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.30.008696
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.3030.002762
ORF1ab/nsp31481D1481YGacTac11B.1.1.3040.002809
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.3050.003861
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.3060.000438
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.3110.000358
ORF1ab/nsp31481D1481NGacAac11B.1.1.3180.000302
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.3280.016949
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.3390.010526
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.3550.015385
ORF1ab/nsp31481D1481YGacTac11B.1.1.3690.000446
ORF1ab/nsp31481D1481delGAC---11B.1.1.370.000193
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.390.00051
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.3970.002252
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.4340.000349
ORF1ab/nsp31481D1481delGAC---11B.1.1.460.004367
ORF1ab/nsp31481D1481delGAC---11B.1.1.4640.001473
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.4860.001577
ORF1ab/nsp31481D1481YGacTac11B.1.1.5190.00004
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.5230.001563
ORF1ab/nsp31481D1481delGAC---11B.1.1.5250.005464
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.580.005376
ORF1ab/nsp31481D1481DgaCgaT11B.1.1.670.004566
ORF1ab/nsp31481D1481VgAcgTc11B.1.1.70.000001
ORF1ab/nsp31481D1481IGAcATc11B.1.1.70.000001
ORF1ab/nsp31481D1481delGAC---11B.1.1.700.000341
ORF1ab/nsp31481D1481EgaCgaA11B.1.1.700.000341
ORF1ab/nsp31481D1481DgaCgaT11B.1.1260.001276
ORF1ab/nsp31481D1481DgaCgaT11B.1.1490.003425
ORF1ab/nsp31481D1481YGacTac11B.1.1570.002985
ORF1ab/nsp31481D1481YGacTac11B.1.160.140.002119
ORF1ab/nsp31481D1481DgaCgaT11B.1.160.160.000929
ORF1ab/nsp31481D1481GgAcgGc11B.1.1770.000013
ORF1ab/nsp31481D1481EgaCgaA11B.1.1770.000013
ORF1ab/nsp31481D1481del2gACg--11B.1.1770.000013
ORF1ab/nsp31481D1481DgaCgaT11B.1.177.160.000664
ORF1ab/nsp31481D1481DgaCgaT11B.1.177.170.000821
ORF1ab/nsp31481D1481NGacAac11B.1.177.200.001517
ORF1ab/nsp31481D1481YGacTac11B.1.177.40.000211
ORF1ab/nsp31481D1481DgaCgaT11B.1.177.430.001477
ORF1ab/nsp31481D1481DgaCgaT11B.1.177.440.000519
ORF1ab/nsp31481D1481HGacCac11B.1.177.440.000519
ORF1ab/nsp31481D1481delGAC---11B.1.177.530.002392
ORF1ab/nsp31481D1481NGacAac11B.1.177.570.000281
ORF1ab/nsp31481D1481delGAC---11B.1.177.60.000977
ORF1ab/nsp31481D1481DgaCgaT11B.1.177.750.001041
ORF1ab/nsp31481D1481DgaCgaT11B.1.177.770.000726
ORF1ab/nsp31481D1481NGacAac11B.1.177.810.000189
ORF1ab/nsp31481D1481EgaCgaA11B.1.177.810.000189
ORF1ab/nsp31481D1481DgaCgaT11B.1.177.820.000477
ORF1ab/nsp31481D1481delGAC---11B.1.177.90.001332
ORF1ab/nsp31481D1481delGAC---11B.1.20.000009
ORF1ab/nsp31481D1481EgaCgaA11B.1.20.000009
ORF1ab/nsp31481D1481VgAcgTc11B.1.20.000009
ORF1ab/nsp31481D1481DgaCgaT11B.1.2140.003663
ORF1ab/nsp31481D1481DgaCgaT11B.1.2180.005155
ORF1ab/nsp31481D1481delGAC---11B.1.2210.000071
ORF1ab/nsp31481D1481GgAcgGc11B.1.2220.001692
ORF1ab/nsp31481D1481DgaCgaT11B.1.2360.002053
ORF1ab/nsp31481D1481NGacAac11B.1.2390.001221
ORF1ab/nsp31481D1481HGacCac11B.1.2430.00007
ORF1ab/nsp31481D1481delGAC---11B.1.2580.000067
ORF1ab/nsp31481D1481DgaCgaT11B.1.258.220.002667
ORF1ab/nsp31481D1481DgaCgaT11B.1.258.240.010753
ORF1ab/nsp31481D1481delGAC---11B.1.2650.001271
ORF1ab/nsp31481D1481DgaCgaT11B.1.3140.007519
ORF1ab/nsp31481D1481DgaCgaT11B.1.3200.001245
ORF1ab/nsp31481D1481AgAcgCc11B.1.3200.001245
ORF1ab/nsp31481D1481VgAcgTc11B.1.3380.008621
ORF1ab/nsp31481D1481EgaCgaA11B.1.3510.00003
ORF1ab/nsp31481D1481HGacCac11B.1.3510.00003
ORF1ab/nsp31481D1481VgAcgTc11B.1.351.30.000876
ORF1ab/nsp31481D1481DgaCgaT11B.1.351.50.0006
ORF1ab/nsp31481D1481DgaCgaT11B.1.36.190.009259
ORF1ab/nsp31481D1481DgaCgaT11B.1.3690.000285
ORF1ab/nsp31481D1481DgaCgaT11B.1.3750.00082
ORF1ab/nsp31481D1481DgaCgaT11B.1.3850.010638
ORF1ab/nsp31481D1481DgaCgaT11B.1.3960.000706
ORF1ab/nsp31481D1481DgaCgaT11B.1.3980.002976
ORF1ab/nsp31481D1481HGacCac11B.1.4000.000429
ORF1ab/nsp31481D1481DgaCgaT11B.1.4090.000781
ORF1ab/nsp31481D1481delGAC---11B.1.416.10.001563
ORF1ab/nsp31481D1481DgaCgaT11B.1.4220.000812
ORF1ab/nsp31481D1481DgaCgaT11B.1.428.30.012821
ORF1ab/nsp31481D1481EgaCgaA11B.1.4290.000024
ORF1ab/nsp31481D1481DgaCgaT11B.1.438.10.000107
ORF1ab/nsp31481D1481DgaCgaT11B.1.4480.002625
ORF1ab/nsp31481D1481VgAcgTc11B.1.466.20.000391
ORF1ab/nsp31481D1481DgaCgaT11B.1.4950.009091
ORF1ab/nsp31481D1481DgaCgaT11B.1.4990.00105
ORF1ab/nsp31481D1481HGacCac11B.1.5250.000113
ORF1ab/nsp31481D1481NGacAac11B.1.5260.000024
ORF1ab/nsp31481D1481delGAC---11B.1.5260.000024
ORF1ab/nsp31481D1481DgaCgaT11B.1.5270.003704
ORF1ab/nsp31481D1481delGAC---11B.1.5330.009615
ORF1ab/nsp31481D1481DgaCgaT11B.1.5400.009709
ORF1ab/nsp31481D1481YGacTac11B.1.5640.000426
ORF1ab/nsp31481D1481DgaCgaT11B.1.575.10.002439
ORF1ab/nsp31481D1481DgaCgaT11B.1.5760.000907
ORF1ab/nsp31481D1481delGAC---11B.1.5770.000687
ORF1ab/nsp31481D1481DgaCgaT11B.1.5820.000491
ORF1ab/nsp31481D1481HGacCac11B.1.5960.000087
ORF1ab/nsp31481D1481GgAcgGc11B.1.5960.000087
ORF1ab/nsp31481D1481AgAcgCc11B.1.5960.000087
ORF1ab/nsp31481D1481HGacCac11B.1.617.20.000004
ORF1ab/nsp31481D1481HGacCac11B.1.6200.000946
ORF1ab/nsp31481D1481EgaCgaA11B.1.6210.000089
ORF1ab/nsp31481D1481delGAC---11B.1.6210.000089
ORF1ab/nsp31481D1481DgaCgaT11B.1.6250.002353
ORF1ab/nsp31481D1481DgaCgaT11B.1.80.001972
ORF1ab/nsp31481D1481YGacTac11B.100.008264
ORF1ab/nsp31481D1481HGacCac11B.600.015873
ORF1ab/nsp31481D1481DgaCgaT11C.36.30.000567
ORF1ab/nsp31481D1481DgaCgaT11C.390.018868
ORF1ab/nsp31481D1481GgACgGT11D.20.000075
ORF1ab/nsp31481D1481YGacTac11D.20.000075
ORF1ab/nsp31481D1481HGacCac11D.20.000075
ORF1ab/nsp31481D1481delGAC---11P.10.000016
ORF1ab/nsp31481D1481IGAcATc11P.10.000016
ORF1ab/nsp31481D1481DgaCgaT11P.1.120.000484
ORF1ab/nsp31481D1481YGacTac11P.1.150.000232
ORF1ab/nsp31481D1481delGAC---11P.1.150.000232
ORF1ab/nsp31481D1481DgaCgaT11P.1.70.000319
ORF1ab/nsp31481D1481DgaCgaT11Q.30.000145
ORF1ab/nsp31481D1481DgaCgaT11W.40.001351