CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1475 & Codon = agA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31475S1475RS2293RnonsynagTagA31180.5806457142-7144

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31475S1475RagTagA1831All0.000003
ORF1ab/nsp31475S1475RagTagA1212AY.20.004274
ORF1ab/nsp31475S1475RagTagA29B.1.1.70.000002
ORF1ab/nsp31475S1475RagTagA11AY.610.000105
ORF1ab/nsp31475S1475RagTagA11B0.000128
ORF1ab/nsp31475S1475RagTagA11B.1.3620.001541
ORF1ab/nsp31475S1475RagTagA11B.1.6210.000089