CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1469 & Codon = TcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31469P1469SP2287SnonsynCcTTcC23650291640.00006934387124-7126

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31469P1469SCcTTcC1642365029All0.000031
ORF1ab/nsp31469P1469SCcTTcC36633589AY.40.000056
ORF1ab/nsp31469P1469SCcTTcC91221435B.1.617.20.000343
ORF1ab/nsp31469P1469SCcTTcC1159885AY.250.000006
ORF1ab/nsp31469P1469SCcTTcC11154517AY.440.000067
ORF1ab/nsp31469P1469SCcTTcC1153497AY.1030.000006
ORF1ab/nsp31469P1469SCcTTcC196246AY.30.00001
ORF1ab/nsp31469P1469SCcTTcC436976AY.1020.000106
ORF1ab/nsp31469P1469SCcTTcC127086AY.1190.000035
ORF1ab/nsp31469P1469SCcTTcC324645AY.200.000117
ORF1ab/nsp31469P1469SCcTTcC119905AY.98.10.000048
ORF1ab/nsp31469P1469SCcTTcC414349AY.330.000267
ORF1ab/nsp31469P1469SCcTTcC18308AY.460.000104
ORF1ab/nsp31469P1469SCcTTcC16913AY.450.000122
ORF1ab/nsp31469P1469SCcTTcC15929AY.46.40.000165
ORF1ab/nsp31469P1469SCcTTcC14015AY.1100.000113
ORF1ab/nsp31469P1469SCcTTcC13309AY.410.000294
ORF1ab/nsp31469P1469SCcTTcC13293AY.1160.000287
ORF1ab/nsp31469P1469SCcTTcC2807AY.790.002421
ORF1ab/nsp31469P1469SCcTTcC135P.10.000016
ORF1ab/nsp31469P1469SCcTTcC134AY.500.000799