CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1469 & Codon = -ct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31469P1469del1P2287del1delCct-ct17130.7647067124-7126

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31469P1469del1Cct-ct1317All0.000002
ORF1ab/nsp31469P1469del1Cct-ct22AY.40.000003
ORF1ab/nsp31469P1469del1Cct-ct22AY.4.50.000215
ORF1ab/nsp31469P1469del1Cct-ct11AY.1020.000027
ORF1ab/nsp31469P1469del1Cct-ct11AY.1030.000006
ORF1ab/nsp31469P1469del1Cct-ct11AY.200.000039
ORF1ab/nsp31469P1469del1Cct-ct11AY.250.000006
ORF1ab/nsp31469P1469del1Cct-ct11AY.4.2.10.000149
ORF1ab/nsp31469P1469del1Cct-ct11AY.430.000004
ORF1ab/nsp31469P1469del1Cct-ct11AY.440.000006
ORF1ab/nsp31469P1469del1Cct-ct11B.1.177.110.001698
ORF1ab/nsp31469P1469del1Cct-ct11B.1.177.160.000664