CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1449 & Codon = --a

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31449R1449del2R2267del2delAGa--a22210.9545457064-7066

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31449R1449del2AGa--a2122All0.000004
ORF1ab/nsp31449R1449del2AGa--a44P.10.000063
ORF1ab/nsp31449R1449del2AGa--a33B.1.20.000026
ORF1ab/nsp31449R1449del2AGa--a220.111111
ORF1ab/nsp31449R1449del2AGa--a22AY.440.000012
ORF1ab/nsp31449R1449del2AGa--a22B.1.1.70.000002
ORF1ab/nsp31449R1449del2AGa--a11AY.1030.000006
ORF1ab/nsp31449R1449del2AGa--a11AY.120.10.000321
ORF1ab/nsp31449R1449del2AGa--a11AY.260.000028
ORF1ab/nsp31449R1449del2AGa--a11AY.30.00001
ORF1ab/nsp31449R1449del2AGa--a11AY.40.000002
ORF1ab/nsp31449R1449del2AGa--a11B.1.36.290.000517
ORF1ab/nsp31449R1449del2AGa--a11B.1.617.20.000004
ORF1ab/nsp31449R1449del2AGa--a11P.1.140.000048