CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1441 & Codon = atT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31441M1441IM2259InonsynatGatT71109708490.9963447040-7042

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31441M1441IatGatT7084971109All0.013551
ORF1ab/nsp31441M1441IatGatT6306263100B.1.1.70.056455
ORF1ab/nsp31441M1441IatGatT12011201Q.80.198054
ORF1ab/nsp31441M1441IatGatT674674B.1.4040.877604
ORF1ab/nsp31441M1441IatGatT564573B.1.617.20.002124
ORF1ab/nsp31441M1441IatGatT479481B.1.10.00869
ORF1ab/nsp31441M1441IatGatT403422AY.40.000627
ORF1ab/nsp31441M1441IatGatT415419B.10.003801
ORF1ab/nsp31441M1441IatGatT414414AY.4.10.30531
ORF1ab/nsp31441M1441IatGatT303306AY.430.001342
ORF1ab/nsp31441M1441IatGatT271272B.1.1770.003568
ORF1ab/nsp31441M1441IatGatT158188AY.440.000962
ORF1ab/nsp31441M1441IatGatT185185B.1.2180.953608
ORF1ab/nsp31441M1441IatGatT153156AY.90.010342
ORF1ab/nsp31441M1441IatGatT138138AY.46.30.128852
ORF1ab/nsp31441M1441IatGatT119128P.10.001875
ORF1ab/nsp31441M1441IatGatT115116AY.260.003256
ORF1ab/nsp31441M1441IatGatT110110B.1.5010.808824
ORF1ab/nsp31441M1441IatGatT93103AY.250.000559
ORF1ab/nsp31441M1441IatGatT96101AY.1030.000596
ORF1ab/nsp31441M1441IatGatT9399B.1.20.000819
ORF1ab/nsp31441M1441IatGatT9191AY.1180.005701
ORF1ab/nsp31441M1441IatGatT9191AY.4.20.001974
ORF1ab/nsp31441M1441IatGatT8888AY.1020.002333
ORF1ab/nsp31441M1441IatGatT1184AY.1200.000409
ORF1ab/nsp31441M1441IatGatT8182AY.390.002002
ORF1ab/nsp31441M1441IatGatT7272AY.50.001487
ORF1ab/nsp31441M1441IatGatT5959B.1.177.730.033409
ORF1ab/nsp31441M1441IatGatT5858Q.10.007327
ORF1ab/nsp31441M1441IatGatT4949AY.60.002015
ORF1ab/nsp31441M1441IatGatT4848B.1.1600.001497
ORF1ab/nsp31441M1441IatGatT3737B.1.1.2140.002052
ORF1ab/nsp31441M1441IatGatT3434B.1.3510.001011
ORF1ab/nsp31441M1441IatGatT3131AY.420.001247
ORF1ab/nsp31441M1441IatGatT3030B.1.1.2290.172414
ORF1ab/nsp31441M1441IatGatT2627B.1.617.10.003353
ORF1ab/nsp31441M1441IatGatT2626B.1.1.3180.007846
ORF1ab/nsp31441M1441IatGatT2425AY.1190.000847
ORF1ab/nsp31441M1441IatGatT2424AY.610.002515
ORF1ab/nsp31441M1441IatGatT2323B.1.1.280.007158
ORF1ab/nsp31441M1441IatGatT2222AY.39.10.000871
ORF1ab/nsp31441M1441IatGatT2121AY.520.017101
ORF1ab/nsp31441M1441IatGatT2121B.1.360.003064
ORF1ab/nsp31441M1441IatGatT2020B.1.220.02635
ORF1ab/nsp31441M1441IatGatT1819B.1.2340.002375
ORF1ab/nsp31441M1441IatGatT1616AY.98.10.000775
ORF1ab/nsp31441M1441IatGatT1515AY.16.10.007049
ORF1ab/nsp31441M1441IatGatT1515AY.460.001561
ORF1ab/nsp31441M1441IatGatT1515B.1.5960.001307
ORF1ab/nsp31441M1441IatGatT1414B.1.1.5070.121739
ORF1ab/nsp31441M1441IatGatT1314B.1.177.600.00284
ORF1ab/nsp31441M1441IatGatT1313AY.450.001582
ORF1ab/nsp31441M1441IatGatT1313AY.980.001027
ORF1ab/nsp31441M1441IatGatT1313B.1.1.5190.000516
ORF1ab/nsp31441M1441IatGatT1313B.1.5260.000306
ORF1ab/nsp31441M1441IatGatT1313P.1.140.000621
ORF1ab/nsp31441M1441IatGatT1212AY.230.000837
ORF1ab/nsp31441M1441IatGatT1212B.1.1.3190.210526
ORF1ab/nsp31441M1441IatGatT1212P.1.150.002788
ORF1ab/nsp31441M1441IatGatT1011AY.30.000099
ORF1ab/nsp31441M1441IatGatT1111B.1.2580.000732
ORF1ab/nsp31441M1441IatGatT710AY.470.000218
ORF1ab/nsp31441M1441IatGatT1010AY.750.00056
ORF1ab/nsp31441M1441IatGatT1010AY.9.20.000367
ORF1ab/nsp31441M1441IatGatT1010B.1.2890.026596
ORF1ab/nsp31441M1441IatGatT910B.1.4290.000212
ORF1ab/nsp31441M1441IatGatT99AY.200.00035
ORF1ab/nsp31441M1441IatGatT78AY.1000.000322
ORF1ab/nsp31441M1441IatGatT38AY.130.000483
ORF1ab/nsp31441M1441IatGatT88B.1.1.2220.001632
ORF1ab/nsp31441M1441IatGatT88B.1.177.70.001319
ORF1ab/nsp31441M1441IatGatT88B.1.2430.000557
ORF1ab/nsp31441M1441IatGatT88B.1.3490.005718
ORF1ab/nsp31441M1441IatGatT88B.1.3750.006557
ORF1ab/nsp31441M1441IatGatT88B.1.5950.002088
ORF1ab/nsp31441M1441IatGatT77AY.1130.000997
ORF1ab/nsp31441M1441IatGatT77AY.290.00011
ORF1ab/nsp31441M1441IatGatT77AY.340.000679
ORF1ab/nsp31441M1441IatGatT77AY.920.002011
ORF1ab/nsp31441M1441IatGatT77AZ.20.005747
ORF1ab/nsp31441M1441IatGatT77B.1.2210.000497
ORF1ab/nsp31441M1441IatGatT77B.1.6370.000512
ORF1ab/nsp31441M1441IatGatT77C.350.005418
ORF1ab/nsp31441M1441IatGatT66AY.1060.002009
ORF1ab/nsp31441M1441IatGatT66B.1.1.3060.00263
ORF1ab/nsp31441M1441IatGatT66B.1.2060.004894
ORF1ab/nsp31441M1441IatGatT66B.1.4270.000303
ORF1ab/nsp31441M1441IatGatT66B.1.5760.00544
ORF1ab/nsp31441M1441IatGatT66N.40.025532
ORF1ab/nsp31441M1441IatGatT46P.20.000747
ORF1ab/nsp31441M1441IatGatT66R.10.00054
ORF1ab/nsp31441M1441IatGatT55AY.1010.002452
ORF1ab/nsp31441M1441IatGatT55AY.1070.00233
ORF1ab/nsp31441M1441IatGatT55AY.320.002662
ORF1ab/nsp31441M1441IatGatT55B.1.1.2200.009294
ORF1ab/nsp31441M1441IatGatT55B.1.177.440.002595
ORF1ab/nsp31441M1441IatGatT55B.1.36.290.002587
ORF1ab/nsp31441M1441IatGatT55B.1.5800.020325
ORF1ab/nsp31441M1441IatGatT55P.1.120.00242
ORF1ab/nsp31441M1441IatGatT44AY.1170.000338
ORF1ab/nsp31441M1441IatGatT34AY.1210.000406
ORF1ab/nsp31441M1441IatGatT44AY.140.000352
ORF1ab/nsp31441M1441IatGatT44AY.160.001519
ORF1ab/nsp31441M1441IatGatT44AY.4.50.00043
ORF1ab/nsp31441M1441IatGatT44AY.70.000784
ORF1ab/nsp31441M1441IatGatT44AY.75.10.000721
ORF1ab/nsp31441M1441IatGatT44AY.890.019608
ORF1ab/nsp31441M1441IatGatT44B.1.1.3150.033898
ORF1ab/nsp31441M1441IatGatT44B.1.1.4360.102564
ORF1ab/nsp31441M1441IatGatT44B.1.214.20.002398
ORF1ab/nsp31441M1441IatGatT34B.1.36.80.003
ORF1ab/nsp31441M1441IatGatT44B.1.4650.015209
ORF1ab/nsp31441M1441IatGatT44B.1.5170.001708
ORF1ab/nsp31441M1441IatGatT44B.1.6090.001918
ORF1ab/nsp31441M1441IatGatT44B.1.6210.000354
ORF1ab/nsp31441M1441IatGatT44C.37.10.010471
ORF1ab/nsp31441M1441IatGatT44N.30.023256
ORF1ab/nsp31441M1441IatGatT33AY.10.001187
ORF1ab/nsp31441M1441IatGatT33AY.1080.003308
ORF1ab/nsp31441M1441IatGatT33AY.1160.00086
ORF1ab/nsp31441M1441IatGatT33AY.220.006276
ORF1ab/nsp31441M1441IatGatT23AY.270.000129
ORF1ab/nsp31441M1441IatGatT33AY.770.003382
ORF1ab/nsp31441M1441IatGatT33AY.840.001312
ORF1ab/nsp31441M1441IatGatT33B.1.1.2530.007519
ORF1ab/nsp31441M1441IatGatT33B.1.1.3120.005736
ORF1ab/nsp31441M1441IatGatT33B.1.1.3680.009259
ORF1ab/nsp31441M1441IatGatT33B.1.1.4120.022901
ORF1ab/nsp31441M1441IatGatT33B.1.1.5280.014423
ORF1ab/nsp31441M1441IatGatT33B.1.1.630.001157
ORF1ab/nsp31441M1441IatGatT33B.1.2360.00616
ORF1ab/nsp31441M1441IatGatT33B.1.2400.000647
ORF1ab/nsp31441M1441IatGatT33B.1.3800.019868
ORF1ab/nsp31441M1441IatGatT33B.1.3960.002117
ORF1ab/nsp31441M1441IatGatT33B.1.4590.012245
ORF1ab/nsp31441M1441IatGatT33B.1.466.20.001174
ORF1ab/nsp31441M1441IatGatT33B.1.5640.001278
ORF1ab/nsp31441M1441IatGatT33B.1.5750.00091
ORF1ab/nsp31441M1441IatGatT33B.1.5770.002062
ORF1ab/nsp31441M1441IatGatT33B.1.5990.010949
ORF1ab/nsp31441M1441IatGatT33B.1.88.10.014423
ORF1ab/nsp31441M1441IatGatT33C.180.007772
ORF1ab/nsp31441M1441IatGatT33N.50.0053
ORF1ab/nsp31441M1441IatGatT33P.1.10.000953
ORF1ab/nsp31441M1441IatGatT22A.23.10.001408
ORF1ab/nsp31441M1441IatGatT22AY.1140.000462
ORF1ab/nsp31441M1441IatGatT22AY.116.10.000623
ORF1ab/nsp31441M1441IatGatT22AY.300.000791
ORF1ab/nsp31441M1441IatGatT22AY.360.000296
ORF1ab/nsp31441M1441IatGatT22AY.370.000632
ORF1ab/nsp31441M1441IatGatT22AY.480.00093
ORF1ab/nsp31441M1441IatGatT22AY.5.40.000553
ORF1ab/nsp31441M1441IatGatT22AY.540.000191
ORF1ab/nsp31441M1441IatGatT22AY.550.001835
ORF1ab/nsp31441M1441IatGatT22AY.900.001369
ORF1ab/nsp31441M1441IatGatT22B.1.1.10.000653
ORF1ab/nsp31441M1441IatGatT22B.1.1.2190.01
ORF1ab/nsp31441M1441IatGatT22B.1.1.2840.000215
ORF1ab/nsp31441M1441IatGatT22B.1.1.330.000842
ORF1ab/nsp31441M1441IatGatT22B.1.1.3390.021053
ORF1ab/nsp31441M1441IatGatT22B.1.1.3480.001592
ORF1ab/nsp31441M1441IatGatT22B.1.1.370.000386
ORF1ab/nsp31441M1441IatGatT22B.1.1.4090.005666
ORF1ab/nsp31441M1441IatGatT22B.1.1.4200.002012
ORF1ab/nsp31441M1441IatGatT22B.1.1.4640.002946
ORF1ab/nsp31441M1441IatGatT22B.1.1.700.000682
ORF1ab/nsp31441M1441IatGatT22B.1.110.30.001437
ORF1ab/nsp31441M1441IatGatT22B.1.1460.008475
ORF1ab/nsp31441M1441IatGatT22B.1.160.260.004843
ORF1ab/nsp31441M1441IatGatT22B.1.258.140.001961
ORF1ab/nsp31441M1441IatGatT22B.1.30.005236
ORF1ab/nsp31441M1441IatGatT22B.1.3110.000549
ORF1ab/nsp31441M1441IatGatT22B.1.351.50.001199
ORF1ab/nsp31441M1441IatGatT22B.1.36.100.009569
ORF1ab/nsp31441M1441IatGatT22B.1.36.310.003503
ORF1ab/nsp31441M1441IatGatT22B.1.4260.002018
ORF1ab/nsp31441M1441IatGatT22B.1.6230.001073
ORF1ab/nsp31441M1441IatGatT22B.1.9.50.011364
ORF1ab/nsp31441M1441IatGatT22B.400.000729
ORF1ab/nsp31441M1441IatGatT22C.360.001821
ORF1ab/nsp31441M1441IatGatT22C.36.30.001134
ORF1ab/nsp31441M1441IatGatT12C.370.000116
ORF1ab/nsp31441M1441IatGatT22C.380.016129
ORF1ab/nsp31441M1441IatGatT22P.1.160.000748
ORF1ab/nsp31441M1441IatGatT22Q.30.00029
ORF1ab/nsp31441M1441IatGatT11A0.000387
ORF1ab/nsp31441M1441IatGatT11A.10.000282
ORF1ab/nsp31441M1441IatGatT11A.50.001923
ORF1ab/nsp31441M1441IatGatT11AD.20.000219
ORF1ab/nsp31441M1441IatGatT11AY.100.00053
ORF1ab/nsp31441M1441IatGatT11AY.1050.000643
ORF1ab/nsp31441M1441IatGatT11AY.110.001339
ORF1ab/nsp31441M1441IatGatT11AY.120.000316
ORF1ab/nsp31441M1441IatGatT11AY.120.10.000321
ORF1ab/nsp31441M1441IatGatT11AY.120.2.10.000498
ORF1ab/nsp31441M1441IatGatT11AY.240.000431
ORF1ab/nsp31441M1441IatGatT11AY.3.10.000085
ORF1ab/nsp31441M1441IatGatT11AY.330.000067
ORF1ab/nsp31441M1441IatGatT11AY.380.000499
ORF1ab/nsp31441M1441IatGatT11AY.4.30.000842
ORF1ab/nsp31441M1441IatGatT11AY.46.10.001027
ORF1ab/nsp31441M1441IatGatT11AY.46.40.000165
ORF1ab/nsp31441M1441IatGatT11AY.46.50.000198
ORF1ab/nsp31441M1441IatGatT11AY.530.000288
ORF1ab/nsp31441M1441IatGatT11AY.590.00053
ORF1ab/nsp31441M1441IatGatT11AY.640.000595
ORF1ab/nsp31441M1441IatGatT11AY.670.000464
ORF1ab/nsp31441M1441IatGatT11AY.700.000209
ORF1ab/nsp31441M1441IatGatT11AY.710.000475
ORF1ab/nsp31441M1441IatGatT11AY.730.000665
ORF1ab/nsp31441M1441IatGatT11AY.9.10.000084
ORF1ab/nsp31441M1441IatGatT11AY.9.2.10.001976
ORF1ab/nsp31441M1441IatGatT11AY.910.00073
ORF1ab/nsp31441M1441IatGatT11AY.950.000761
ORF1ab/nsp31441M1441IatGatT11AY.99.10.001553
ORF1ab/nsp31441M1441IatGatT11AY.99.20.000092
ORF1ab/nsp31441M1441IatGatT11B0.000128
ORF1ab/nsp31441M1441IatGatT11B.1.1.1220.045455
ORF1ab/nsp31441M1441IatGatT11B.1.1.1610.003534
ORF1ab/nsp31441M1441IatGatT11B.1.1.1620.029412
ORF1ab/nsp31441M1441IatGatT11B.1.1.1890.001513
ORF1ab/nsp31441M1441IatGatT11B.1.1.250.000569
ORF1ab/nsp31441M1441IatGatT11B.1.1.2730.006757
ORF1ab/nsp31441M1441IatGatT11B.1.1.2790.001121
ORF1ab/nsp31441M1441IatGatT11B.1.1.2890.002083
ORF1ab/nsp31441M1441IatGatT11B.1.1.3110.000358
ORF1ab/nsp31441M1441IatGatT11B.1.1.3250.025641
ORF1ab/nsp31441M1441IatGatT11B.1.1.3400.045455
ORF1ab/nsp31441M1441IatGatT11B.1.1.3890.006061
ORF1ab/nsp31441M1441IatGatT11B.1.1.390.00051
ORF1ab/nsp31441M1441IatGatT11B.1.1.4190.007407
ORF1ab/nsp31441M1441IatGatT11B.1.1.4340.000349
ORF1ab/nsp31441M1441IatGatT11B.1.1.4620.008621
ORF1ab/nsp31441M1441IatGatT11B.1.1.500.000679
ORF1ab/nsp31441M1441IatGatT11B.1.1.540.003021
ORF1ab/nsp31441M1441IatGatT11B.1.1.830.00271
ORF1ab/nsp31441M1441IatGatT11B.1.1110.001175
ORF1ab/nsp31441M1441IatGatT11B.1.130.002375
ORF1ab/nsp31441M1441IatGatT11B.1.1470.000756
ORF1ab/nsp31441M1441IatGatT11B.1.177.170.000821
ORF1ab/nsp31441M1441IatGatT11B.1.177.210.000076
ORF1ab/nsp31441M1441IatGatT11B.1.177.40.000211
ORF1ab/nsp31441M1441IatGatT11B.1.177.530.002392
ORF1ab/nsp31441M1441IatGatT11B.1.177.540.000606
ORF1ab/nsp31441M1441IatGatT11B.1.177.650.000665
ORF1ab/nsp31441M1441IatGatT11B.1.177.750.001041
ORF1ab/nsp31441M1441IatGatT11B.1.2140.003663
ORF1ab/nsp31441M1441IatGatT11B.1.214.30.007143
ORF1ab/nsp31441M1441IatGatT11B.1.2220.001692
ORF1ab/nsp31441M1441IatGatT11B.1.2410.000812
ORF1ab/nsp31441M1441IatGatT11B.1.2470.014925
ORF1ab/nsp31441M1441IatGatT11B.1.3240.001605
ORF1ab/nsp31441M1441IatGatT11B.1.351.30.000876
ORF1ab/nsp31441M1441IatGatT11B.1.36.170.000494
ORF1ab/nsp31441M1441IatGatT11B.1.3780.006849
ORF1ab/nsp31441M1441IatGatT11B.1.3970.004854
ORF1ab/nsp31441M1441IatGatT11B.1.4000.000429
ORF1ab/nsp31441M1441IatGatT11B.1.4280.00102
ORF1ab/nsp31441M1441IatGatT11B.1.438.10.000107
ORF1ab/nsp31441M1441IatGatT11B.1.5030.002488
ORF1ab/nsp31441M1441IatGatT11B.1.5090.000866
ORF1ab/nsp31441M1441IatGatT11B.1.5210.004975
ORF1ab/nsp31441M1441IatGatT11B.1.5240.001406
ORF1ab/nsp31441M1441IatGatT11B.1.5270.003704
ORF1ab/nsp31441M1441IatGatT11B.1.5600.00463
ORF1ab/nsp31441M1441IatGatT11B.1.5610.000397
ORF1ab/nsp31441M1441IatGatT11B.1.5710.009709
ORF1ab/nsp31441M1441IatGatT11B.1.5820.000491
ORF1ab/nsp31441M1441IatGatT11B.1.6030.010638
ORF1ab/nsp31441M1441IatGatT11B.1.6060.006024
ORF1ab/nsp31441M1441IatGatT11B.1.6190.000871
ORF1ab/nsp31441M1441IatGatT11B.1.6270.00202
ORF1ab/nsp31441M1441IatGatT11B.1.6340.003425
ORF1ab/nsp31441M1441IatGatT11B.1.810.021277
ORF1ab/nsp31441M1441IatGatT11B.1.940.027027
ORF1ab/nsp31441M1441IatGatT11B.290.003509
ORF1ab/nsp31441M1441IatGatT11B.410.008
ORF1ab/nsp31441M1441IatGatT11C.1.20.004255
ORF1ab/nsp31441M1441IatGatT11C.160.00106
ORF1ab/nsp31441M1441IatGatT11C.30.007634
ORF1ab/nsp31441M1441IatGatT11C.36.3.10.002717
ORF1ab/nsp31441M1441IatGatT11P.1.170.000162
ORF1ab/nsp31441M1441IatGatT11P.1.20.001156
ORF1ab/nsp31441M1441IatGatT11P.1.40.000977
ORF1ab/nsp31441M1441IatGatT11P.50.013699
ORF1ab/nsp31441M1441IatGatT11Q.40.000455
ORF1ab/nsp31441M1441IatGatT11S.10.00495