CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1441 & Codon = atA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31441M1441IM2259InonsynatGatA711092450.003445417040-7042

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31441M1441IatGatA24571109All0.000047
ORF1ab/nsp31441M1441IatGatA3363100B.1.1.70.00003
ORF1ab/nsp31441M1441IatGatA9573B.1.617.20.000034
ORF1ab/nsp31441M1441IatGatA1481B.1.10.000018
ORF1ab/nsp31441M1441IatGatA19422AY.40.00003
ORF1ab/nsp31441M1441IatGatA2419B.10.000018
ORF1ab/nsp31441M1441IatGatA3306AY.430.000013
ORF1ab/nsp31441M1441IatGatA1272B.1.1770.000013
ORF1ab/nsp31441M1441IatGatA30188AY.440.000183
ORF1ab/nsp31441M1441IatGatA3156AY.90.000203
ORF1ab/nsp31441M1441IatGatA9128P.10.000142
ORF1ab/nsp31441M1441IatGatA1116AY.260.000028
ORF1ab/nsp31441M1441IatGatA10103AY.250.00006
ORF1ab/nsp31441M1441IatGatA5101AY.1030.000031
ORF1ab/nsp31441M1441IatGatA699B.1.20.000053
ORF1ab/nsp31441M1441IatGatA7384AY.1200.002714
ORF1ab/nsp31441M1441IatGatA182AY.390.000025
ORF1ab/nsp31441M1441IatGatA125AY.1190.000035
ORF1ab/nsp31441M1441IatGatA119B.1.2340.000132
ORF1ab/nsp31441M1441IatGatA114B.1.177.600.000218
ORF1ab/nsp31441M1441IatGatA111AY.30.00001
ORF1ab/nsp31441M1441IatGatA310AY.470.000093
ORF1ab/nsp31441M1441IatGatA1010U.30.03861
ORF1ab/nsp31441M1441IatGatA58AY.130.000805
ORF1ab/nsp31441M1441IatGatA26P.20.000373
ORF1ab/nsp31441M1441IatGatA14AY.1210.000135
ORF1ab/nsp31441M1441IatGatA14B.1.36.80.001
ORF1ab/nsp31441M1441IatGatA230.111111
ORF1ab/nsp31441M1441IatGatA33B.1.5580.013699
ORF1ab/nsp31441M1441IatGatA22B.1.177.570.000562
ORF1ab/nsp31441M1441IatGatA12C.370.000116
ORF1ab/nsp31441M1441IatGatA12D.20.000075
ORF1ab/nsp31441M1441IatGatA11AY.120.20.001285
ORF1ab/nsp31441M1441IatGatA11B.1.160.120.00641
ORF1ab/nsp31441M1441IatGatA11B.1.3200.001245
ORF1ab/nsp31441M1441IatGatA11B.6.60.000889