CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1431 & Codon = gcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31431A1431AA2249AsyngcTgcC3041480.4868427010-7012

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31431A1431AgcTgcC148304All0.000028
ORF1ab/nsp31431A1431AgcTgcC152C.370.000116
ORF1ab/nsp31431A1431AgcTgcC4447B.1.1.70.000039
ORF1ab/nsp31431A1431AgcTgcC922B.1.10.000163
ORF1ab/nsp31431A1431AgcTgcC616B.1.20.000053
ORF1ab/nsp31431A1431AgcTgcC1414P.10.000221
ORF1ab/nsp31431A1431AgcTgcC510B.10.000046
ORF1ab/nsp31431A1431AgcTgcC99B.1.1.3160.008326
ORF1ab/nsp31431A1431AgcTgcC99B.1.617.20.000034
ORF1ab/nsp31431A1431AgcTgcC88AY.40.000012
ORF1ab/nsp31431A1431AgcTgcC45AY.430.000018
ORF1ab/nsp31431A1431AgcTgcC34AY.390.000074
ORF1ab/nsp31431A1431AgcTgcC34AY.440.000018
ORF1ab/nsp31431A1431AgcTgcC34B.1.1770.00004
ORF1ab/nsp31431A1431AgcTgcC33AY.250.000018
ORF1ab/nsp31431A1431AgcTgcC120.055556
ORF1ab/nsp31431A1431AgcTgcC12AY.1030.000006
ORF1ab/nsp31431A1431AgcTgcC22AY.1210.000271
ORF1ab/nsp31431A1431AgcTgcC22AY.460.000208
ORF1ab/nsp31431A1431AgcTgcC11AY.1080.001103
ORF1ab/nsp31431A1431AgcTgcC11AY.1190.000035
ORF1ab/nsp31431A1431AgcTgcC11AY.230.00007
ORF1ab/nsp31431A1431AgcTgcC11AY.3.10.000085
ORF1ab/nsp31431A1431AgcTgcC11AY.330.000067
ORF1ab/nsp31431A1431AgcTgcC11AY.420.00004
ORF1ab/nsp31431A1431AgcTgcC11AY.670.000464
ORF1ab/nsp31431A1431AgcTgcC11AY.850.000427
ORF1ab/nsp31431A1431AgcTgcC11AY.9.10.000084
ORF1ab/nsp31431A1431AgcTgcC11B.1.1.2070.001182
ORF1ab/nsp31431A1431AgcTgcC11B.1.1.2690.001353
ORF1ab/nsp31431A1431AgcTgcC11B.1.1.4420.018519
ORF1ab/nsp31431A1431AgcTgcC11B.1.1.5190.00004
ORF1ab/nsp31431A1431AgcTgcC11B.1.1530.018868
ORF1ab/nsp31431A1431AgcTgcC11B.1.2430.00007
ORF1ab/nsp31431A1431AgcTgcC11B.1.3510.00003
ORF1ab/nsp31431A1431AgcTgcC11B.1.4040.001302
ORF1ab/nsp31431A1431AgcTgcC11B.1.4290.000024
ORF1ab/nsp31431A1431AgcTgcC11B.1.5260.000024
ORF1ab/nsp31431A1431AgcTgcC11B.1.5960.000087
ORF1ab/nsp31431A1431AgcTgcC11U.30.003861