CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1429 & Codon = aTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31429T1429IT2247InonsynaCcaTc93893817004-7006

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31429T1429IaCcaTc938938All0.000179
ORF1ab/nsp31429T1429IaCcaTc356356B.1.1.70.000319
ORF1ab/nsp31429T1429IaCcaTc6969B.1.258.140.067647
ORF1ab/nsp31429T1429IaCcaTc4848P.10.000756
ORF1ab/nsp31429T1429IaCcaTc3939B.1.617.20.000147
ORF1ab/nsp31429T1429IaCcaTc3636B.1.6370.002631
ORF1ab/nsp31429T1429IaCcaTc3333AY.230.002302
ORF1ab/nsp31429T1429IaCcaTc2929AY.40.000045
ORF1ab/nsp31429T1429IaCcaTc2626AY.370.008217
ORF1ab/nsp31429T1429IaCcaTc2020B.1.4270.00101
ORF1ab/nsp31429T1429IaCcaTc1616B.1.20.000141
ORF1ab/nsp31429T1429IaCcaTc1515AY.30.000149
ORF1ab/nsp31429T1429IaCcaTc1515B.1.1.2070.01773
ORF1ab/nsp31429T1429IaCcaTc1313B.1.5960.001133
ORF1ab/nsp31429T1429IaCcaTc99AY.1030.000056
ORF1ab/nsp31429T1429IaCcaTc99AY.1190.000318
ORF1ab/nsp31429T1429IaCcaTc99B.1.6210.000797
ORF1ab/nsp31429T1429IaCcaTc88A.23.10.005634
ORF1ab/nsp31429T1429IaCcaTc88AY.270.000518
ORF1ab/nsp31429T1429IaCcaTc88B.1.1600.00025
ORF1ab/nsp31429T1429IaCcaTc77AY.360.001037
ORF1ab/nsp31429T1429IaCcaTc77B.10.000064
ORF1ab/nsp31429T1429IaCcaTc77B.1.10.000127
ORF1ab/nsp31429T1429IaCcaTc77B.1.2580.000466
ORF1ab/nsp31429T1429IaCcaTc66AY.250.000036
ORF1ab/nsp31429T1429IaCcaTc66P.1.140.000287
ORF1ab/nsp31429T1429IaCcaTc55AY.39.10.000198
ORF1ab/nsp31429T1429IaCcaTc55AY.430.000022
ORF1ab/nsp31429T1429IaCcaTc55AY.46.40.000823
ORF1ab/nsp31429T1429IaCcaTc55AY.75.10.000902
ORF1ab/nsp31429T1429IaCcaTc55B.1.1.280.001556
ORF1ab/nsp31429T1429IaCcaTc44AY.390.000099
ORF1ab/nsp31429T1429IaCcaTc44AY.470.000124
ORF1ab/nsp31429T1429IaCcaTc44AY.610.000419
ORF1ab/nsp31429T1429IaCcaTc44AY.7.10.000451
ORF1ab/nsp31429T1429IaCcaTc44B.1.1.2220.000816
ORF1ab/nsp31429T1429IaCcaTc44P.1.120.001936
ORF1ab/nsp31429T1429IaCcaTc33AY.1020.00008
ORF1ab/nsp31429T1429IaCcaTc33AY.260.000085
ORF1ab/nsp31429T1429IaCcaTc33AY.290.000047
ORF1ab/nsp31429T1429IaCcaTc33AY.4.20.000065
ORF1ab/nsp31429T1429IaCcaTc33B.1.2210.000213
ORF1ab/nsp31429T1429IaCcaTc33B.1.36.10.003421
ORF1ab/nsp31429T1429IaCcaTc33P.1.150.000697
ORF1ab/nsp31429T1429IaCcaTc22AY.1050.001286
ORF1ab/nsp31429T1429IaCcaTc22AY.1130.000285
ORF1ab/nsp31429T1429IaCcaTc22AY.200.000078
ORF1ab/nsp31429T1429IaCcaTc22AY.9.20.000073
ORF1ab/nsp31429T1429IaCcaTc22AY.99.20.000184
ORF1ab/nsp31429T1429IaCcaTc22B.1.1.2940.002532
ORF1ab/nsp31429T1429IaCcaTc22B.1.1770.000026
ORF1ab/nsp31429T1429IaCcaTc22B.1.3510.000059
ORF1ab/nsp31429T1429IaCcaTc22B.1.36.310.003503
ORF1ab/nsp31429T1429IaCcaTc22B.1.4290.000047
ORF1ab/nsp31429T1429IaCcaTc22B.1.5950.000522
ORF1ab/nsp31429T1429IaCcaTc22C.370.000232
ORF1ab/nsp31429T1429IaCcaTc22R.10.00018
ORF1ab/nsp31429T1429IaCcaTc11AY.1000.000046
ORF1ab/nsp31429T1429IaCcaTc11AY.1110.000183
ORF1ab/nsp31429T1429IaCcaTc11AY.1210.000135
ORF1ab/nsp31429T1429IaCcaTc11AY.320.000532
ORF1ab/nsp31429T1429IaCcaTc11AY.4.50.000107
ORF1ab/nsp31429T1429IaCcaTc11AY.420.00004
ORF1ab/nsp31429T1429IaCcaTc11AY.440.000006
ORF1ab/nsp31429T1429IaCcaTc11AY.450.000122
ORF1ab/nsp31429T1429IaCcaTc11AY.60.000041
ORF1ab/nsp31429T1429IaCcaTc11AY.670.000464
ORF1ab/nsp31429T1429IaCcaTc11AY.70.000196
ORF1ab/nsp31429T1429IaCcaTc11AY.700.000209
ORF1ab/nsp31429T1429IaCcaTc11AY.98.10.000048
ORF1ab/nsp31429T1429IaCcaTc11B.1.1.1760.000439
ORF1ab/nsp31429T1429IaCcaTc11B.1.1.1860.003436
ORF1ab/nsp31429T1429IaCcaTc11B.1.1.2140.000055
ORF1ab/nsp31429T1429IaCcaTc11B.1.1.2650.003155
ORF1ab/nsp31429T1429IaCcaTc11B.1.1.390.00051
ORF1ab/nsp31429T1429IaCcaTc11B.1.1.5190.00004
ORF1ab/nsp31429T1429IaCcaTc11B.1.1040.00369
ORF1ab/nsp31429T1429IaCcaTc11B.1.2340.000132
ORF1ab/nsp31429T1429IaCcaTc11B.1.2400.000216
ORF1ab/nsp31429T1429IaCcaTc11B.1.2430.00007
ORF1ab/nsp31429T1429IaCcaTc11B.1.3190.003049
ORF1ab/nsp31429T1429IaCcaTc11B.1.3490.000715
ORF1ab/nsp31429T1429IaCcaTc11B.1.3690.000285
ORF1ab/nsp31429T1429IaCcaTc11B.1.5250.000113
ORF1ab/nsp31429T1429IaCcaTc11B.1.5260.000024
ORF1ab/nsp31429T1429IaCcaTc11B.1.5600.00463
ORF1ab/nsp31429T1429IaCcaTc11B.1.6090.000479
ORF1ab/nsp31429T1429IaCcaTc11B.520.010101
ORF1ab/nsp31429T1429IaCcaTc11C.80.004464
ORF1ab/nsp31429T1429IaCcaTc11D.20.000075
ORF1ab/nsp31429T1429IaCcaTc11N.50.001767
ORF1ab/nsp31429T1429IaCcaTc11P.1.10.000318
ORF1ab/nsp31429T1429IaCcaTc11P.1.160.000374