CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1422

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31422L1422LL2240LsynCtaTta195610750.5495916983-6985
ORF1ab/nsp31422L1422LL2240LsynctActT19568210.4197346983-6985
ORF1ab/nsp31422L1422LL2240LsynctActG1956480.02453996983-6985
ORF1ab/nsp31422L1422LL2240LsynctActC1956110.005623726983-6985
ORF1ab/nsp31422L1422LL2240LsynCtATtG195610.0005112476983-6985
ORF1ab/nsp31422L1422IL2240InonsynCtaAta34434416983-6985
ORF1ab/nsp31422L1422delL2240deldelCTA---23323316983-6985
ORF1ab/nsp31422L1422PL2240PnonsyncTacCa15130.8666676983-6985
ORF1ab/nsp31422L1422PL2240PnonsyncTAcCT1510.06666676983-6985
ORF1ab/nsp31422L1422PL2240PnonsyncTAcCC1510.06666676983-6985
ORF1ab/nsp31422L1422QL2240QnonsyncTacAa5516983-6985
ORF1ab/nsp31422L1422SL2240SnonsynCTAAGC430.756983-6985
ORF1ab/nsp31422L1422VL2240VnonsynCtaGta430.756983-6985
ORF1ab/nsp31422L1422SL2240SnonsynCTaTCa410.256983-6985
ORF1ab/nsp31422L1422VL2240VnonsynCtAGtT410.256983-6985
ORF1ab/nsp31422L1422XL2240XnonsynCTaTAa3316983-6985
ORF1ab/nsp31422L1422RL2240RnonsyncTacGa3316983-6985
ORF1ab/nsp31422L1422del1L2240del1delctAct-320.6666676983-6985
ORF1ab/nsp31422L1422del1L2240del1delCta-ta310.3333336983-6985
ORF1ab/nsp31422L1422del2L2240del2delCTAT--210.56983-6985
ORF1ab/nsp31422L1422del2L2240del2delcTAc--210.56983-6985
ORF1ab/nsp31422L1422TL2240TnonsynCTaACa1116983-6985
ORF1ab/nsp31422L1422KL2240KnonsynCTaAAa1116983-6985

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31422L1422LCtaTta10751956All0.000206
ORF1ab/nsp31422L1422LctActT8211956All0.000157
ORF1ab/nsp31422L1422LctActG481956All0.000009
ORF1ab/nsp31422L1422LctActC111956All0.000002
ORF1ab/nsp31422L1422LCtATtG11956All0
ORF1ab/nsp31422L1422LctActT721721B.1.1.4320.912658
ORF1ab/nsp31422L1422ICtaAta344344All0.000066
ORF1ab/nsp31422L1422LCtaTta250265B.1.1.70.000224
ORF1ab/nsp31422L1422LctActT7265B.1.1.70.000006
ORF1ab/nsp31422L1422LctActC4265B.1.1.70.000004
ORF1ab/nsp31422L1422LctActG4265B.1.1.70.000004
ORF1ab/nsp31422L1422delCTA---233233All0.000045
ORF1ab/nsp31422L1422LCtaTta168168B.1.1.1960.96
ORF1ab/nsp31422L1422ICtaAta154154AY.330.010284
ORF1ab/nsp31422L1422LCtaTta126127B.1.617.20.000474
ORF1ab/nsp31422L1422LctActG1127B.1.617.20.000004
ORF1ab/nsp31422L1422delCTA---8989B.1.1.70.00008
ORF1ab/nsp31422L1422LctActT4767B.10.00043
ORF1ab/nsp31422L1422LCtaTta1867B.10.000165
ORF1ab/nsp31422L1422LctActG167B.10.000009
ORF1ab/nsp31422L1422LctActC167B.10.000009
ORF1ab/nsp31422L1422LCtaTta6063AY.40.000093
ORF1ab/nsp31422L1422LctActG263AY.40.000003
ORF1ab/nsp31422L1422LctActC163AY.40.000002
ORF1ab/nsp31422L1422LCtaTta6060P.1.140.002868
ORF1ab/nsp31422L1422LCtaTta5050AY.420.002012
ORF1ab/nsp31422L1422ICtaAta4747AY.40.000073
ORF1ab/nsp31422L1422LCtaTta2143B.1.20.000185
ORF1ab/nsp31422L1422LctActT1643B.1.20.000141
ORF1ab/nsp31422L1422LctActG443B.1.20.000035
ORF1ab/nsp31422L1422LctActC243B.1.20.000018
ORF1ab/nsp31422L1422LCtaTta3134AY.430.000137
ORF1ab/nsp31422L1422LctActG234AY.430.000009
ORF1ab/nsp31422L1422LctActT134AY.430.000004
ORF1ab/nsp31422L1422LCtaTta2732B.1.1770.000356
ORF1ab/nsp31422L1422LctActT432B.1.1770.000053
ORF1ab/nsp31422L1422LctActG132B.1.1770.000013
ORF1ab/nsp31422L1422LCtaTta1730B.1.10.000308
ORF1ab/nsp31422L1422LctActT930B.1.10.000163
ORF1ab/nsp31422L1422LctActC230B.1.10.000036
ORF1ab/nsp31422L1422LctActG230B.1.10.000036
ORF1ab/nsp31422L1422ICtaAta2121AY.50.000434
ORF1ab/nsp31422L1422LCtaTta1821AY.50.000372
ORF1ab/nsp31422L1422LctActG221AY.50.000041
ORF1ab/nsp31422L1422LctActT121AY.50.000021
ORF1ab/nsp31422L1422delCTA---1919AY.40.00003
ORF1ab/nsp31422L1422ICtaAta1919B.1.1.70.000017
ORF1ab/nsp31422L1422delCTA---1919B.1.1770.00025
ORF1ab/nsp31422L1422LCtaTta1718B.1.4290.0004
ORF1ab/nsp31422L1422LctActT118B.1.4290.000024
ORF1ab/nsp31422L1422LCtaTta1616AY.1030.000099
ORF1ab/nsp31422L1422ICtaAta1616AY.46.50.003175
ORF1ab/nsp31422L1422PcTacCa1315All0.000002
ORF1ab/nsp31422L1422PcTAcCT115All0
ORF1ab/nsp31422L1422PcTAcCC115All0
ORF1ab/nsp31422L1422LCtaTta1414AY.250.000084
ORF1ab/nsp31422L1422LCtaTta1114B.1.5960.000959
ORF1ab/nsp31422L1422LctActT314B.1.5960.000261
ORF1ab/nsp31422L1422LCtaTta1313B.1.1.4340.004531
ORF1ab/nsp31422L1422ICtaAta1212AY.250.000072
ORF1ab/nsp31422L1422LCtaTta811AY.440.000049
ORF1ab/nsp31422L1422LctActG311AY.440.000018
ORF1ab/nsp31422L1422delCTA---1111B.10.000101
ORF1ab/nsp31422L1422ICtaAta1010AY.430.000044
ORF1ab/nsp31422L1422ICtaAta99AY.440.000055
ORF1ab/nsp31422L1422LCtaTta88AY.9.20.000294
ORF1ab/nsp31422L1422delCTA---88B.1.10.000145
ORF1ab/nsp31422L1422ICtaAta88B.1.617.20.00003
ORF1ab/nsp31422L1422ICtaAta77AY.470.000218
ORF1ab/nsp31422L1422LCtaTta77B.1.429.10.084337
ORF1ab/nsp31422L1422LctActG36AY.260.000085
ORF1ab/nsp31422L1422LCtaTta26AY.260.000057
ORF1ab/nsp31422L1422LctActT16AY.260.000028
ORF1ab/nsp31422L1422delCTA---66AY.4.50.000645
ORF1ab/nsp31422L1422LCtaTta66AY.980.000474
ORF1ab/nsp31422L1422LCtaTta66AY.99.20.000553
ORF1ab/nsp31422L1422LCtaTta350.166667
ORF1ab/nsp31422L1422LCtATtG150.055556
ORF1ab/nsp31422L1422LctActG150.055556
ORF1ab/nsp31422L1422QcTacAa55All0.000001
ORF1ab/nsp31422L1422LCtaTta55AY.1020.000133
ORF1ab/nsp31422L1422LCtaTta55AY.650.002665
ORF1ab/nsp31422L1422ICtaAta55B.10.000046
ORF1ab/nsp31422L1422LCtaTta45B.1.1.100.004459
ORF1ab/nsp31422L1422LctActT15B.1.1.100.001115
ORF1ab/nsp31422L1422LCtaTta55B.1.110.30.003592
ORF1ab/nsp31422L1422LCtaTta45P.10.000063
ORF1ab/nsp31422L1422LctActG15P.10.000016
ORF1ab/nsp31422L1422delCTA---440.222222
ORF1ab/nsp31422L1422VCtaGta34All0.000001
ORF1ab/nsp31422L1422SCTAAGC34All0.000001
ORF1ab/nsp31422L1422SCTaTCa14All0
ORF1ab/nsp31422L1422VCtAGtT14All0
ORF1ab/nsp31422L1422ICtaAta44AY.30.00004
ORF1ab/nsp31422L1422LCtaTta34AY.30.00003
ORF1ab/nsp31422L1422LctActG14AY.30.00001
ORF1ab/nsp31422L1422delCTA---44AY.430.000018
ORF1ab/nsp31422L1422LCtaTta44AY.470.000124
ORF1ab/nsp31422L1422LctActG44B.1.1600.000125
ORF1ab/nsp31422L1422delCTA---44B.1.177.40.000844
ORF1ab/nsp31422L1422delCTA---44B.1.617.20.000015
ORF1ab/nsp31422L1422XCTaTAa33All0.000001
ORF1ab/nsp31422L1422RcTacGa33All0.000001
ORF1ab/nsp31422L1422del1ctAct-23All0
ORF1ab/nsp31422L1422del1Cta-ta13All0
ORF1ab/nsp31422L1422LCtaTta33AY.1160.00086
ORF1ab/nsp31422L1422LCtaTta33AY.1190.000106
ORF1ab/nsp31422L1422LCtaTta23AY.230.000139
ORF1ab/nsp31422L1422LctActG13AY.230.00007
ORF1ab/nsp31422L1422LCtaTta33AY.290.000047
ORF1ab/nsp31422L1422LctActG23AY.4.20.000043
ORF1ab/nsp31422L1422LCtaTta13AY.4.20.000022
ORF1ab/nsp31422L1422PcTAcCC13B.1.10.000018
ORF1ab/nsp31422L1422PcTacCa13B.1.10.000018
ORF1ab/nsp31422L1422PcTAcCT13B.1.10.000018
ORF1ab/nsp31422L1422LCtaTta23B.1.1.5190.000079
ORF1ab/nsp31422L1422LctActT13B.1.1.5190.00004
ORF1ab/nsp31422L1422ICtaAta33B.1.20.000026
ORF1ab/nsp31422L1422delCTA---33B.1.20.000026
ORF1ab/nsp31422L1422LCtaTta33B.1.2210.000213
ORF1ab/nsp31422L1422delCTA---33B.1.2210.000213
ORF1ab/nsp31422L1422ICtaAta33B.1.3510.000089
ORF1ab/nsp31422L1422LCtaTta33B.1.3690.000856
ORF1ab/nsp31422L1422LCtaTta33B.1.5250.000339
ORF1ab/nsp31422L1422LCtaTta33B.1.5610.001191
ORF1ab/nsp31422L1422LCtaTta33P.1.70.000958
ORF1ab/nsp31422L1422XCTaTAa220.111111
ORF1ab/nsp31422L1422QcTacAa220.111111
ORF1ab/nsp31422L1422LCtaTta22A.2.5.20.003145
ORF1ab/nsp31422L1422del2CTAT--12All0
ORF1ab/nsp31422L1422del2cTAc--12All0
ORF1ab/nsp31422L1422LctActG12AY.10.000396
ORF1ab/nsp31422L1422LctActT12AY.10.000396
ORF1ab/nsp31422L1422LCtaTta22AY.100.00106
ORF1ab/nsp31422L1422ICtaAta22AY.1000.000092
ORF1ab/nsp31422L1422ICtaAta22AY.1030.000012
ORF1ab/nsp31422L1422LCtaTta22AY.200.000078
ORF1ab/nsp31422L1422LCtaTta22AY.29.10.000441
ORF1ab/nsp31422L1422ICtaAta22AY.390.000049
ORF1ab/nsp31422L1422LCtaTta22AY.5.30.000675
ORF1ab/nsp31422L1422LCtaTta22AY.5.40.000553
ORF1ab/nsp31422L1422PcTacCa22AY.590.001059
ORF1ab/nsp31422L1422ICtaAta22AY.670.000929
ORF1ab/nsp31422L1422LCtaTta22AY.98.10.000097
ORF1ab/nsp31422L1422LCtaTta22AY.99.10.003106
ORF1ab/nsp31422L1422ICtaAta22B.1.10.000036
ORF1ab/nsp31422L1422del1ctAct-22B.1.1.70.000002
ORF1ab/nsp31422L1422LctActG12B.1.177.210.000076
ORF1ab/nsp31422L1422LCtaTta12B.1.177.210.000076
ORF1ab/nsp31422L1422ICtaAta22B.1.177.440.001038
ORF1ab/nsp31422L1422delCTA---22B.1.177.570.000562
ORF1ab/nsp31422L1422LctActT12B.1.2340.000132
ORF1ab/nsp31422L1422LCtaTta12B.1.2340.000132
ORF1ab/nsp31422L1422LCtaTta22B.1.2400.000431
ORF1ab/nsp31422L1422LCtaTta22B.1.2580.000133
ORF1ab/nsp31422L1422LCtaTta12B.1.3510.00003
ORF1ab/nsp31422L1422LctActG12B.1.3510.00003
ORF1ab/nsp31422L1422delCTA---22B.1.5170.000854
ORF1ab/nsp31422L1422SCTAAGC22B.1.617.20.000008
ORF1ab/nsp31422L1422LctActG12B.1.780.008547
ORF1ab/nsp31422L1422LctActT12B.1.780.008547
ORF1ab/nsp31422L1422delCTA---22P.10.000032
ORF1ab/nsp31422L1422LctActT22P.50.027397
ORF1ab/nsp31422L1422delCTA---22U.30.007722
ORF1ab/nsp31422L1422delCTA---11A0.000387
ORF1ab/nsp31422L1422RcTacGa11A.2.40.003367
ORF1ab/nsp31422L1422PcTacCa11A.2.40.003367
ORF1ab/nsp31422L1422delCTA---11A.2.40.003367
ORF1ab/nsp31422L1422LCtaTta11A.23.10.000704
ORF1ab/nsp31422L1422delCTA---11A.280.002646
ORF1ab/nsp31422L1422ICtaAta11A.30.002096
ORF1ab/nsp31422L1422LCtaTta11A.30.002096
ORF1ab/nsp31422L1422delCTA---11AD.20.000219
ORF1ab/nsp31422L1422KCTaAAa11All0
ORF1ab/nsp31422L1422TCTaACa11All0
ORF1ab/nsp31422L1422VCtaGta11AY.1020.000027
ORF1ab/nsp31422L1422PcTacCa11AY.1030.000006
ORF1ab/nsp31422L1422delCTA---11AY.1030.000006
ORF1ab/nsp31422L1422LCtaTta11AY.1060.000335
ORF1ab/nsp31422L1422LctActG11AY.1100.000113
ORF1ab/nsp31422L1422ICtaAta11AY.1100.000113
ORF1ab/nsp31422L1422delCTA---11AY.1200.000037
ORF1ab/nsp31422L1422ICtaAta11AY.1210.000135
ORF1ab/nsp31422L1422LctActC11AY.160.00038
ORF1ab/nsp31422L1422PcTacCa11AY.230.00007
ORF1ab/nsp31422L1422delCTA---11AY.240.000431
ORF1ab/nsp31422L1422RcTacGa11AY.250.000006
ORF1ab/nsp31422L1422delCTA---11AY.250.000006
ORF1ab/nsp31422L1422ICtaAta11AY.3.10.000085
ORF1ab/nsp31422L1422LctActG11AY.3.10.000085
ORF1ab/nsp31422L1422LCtaTta11AY.300.000396
ORF1ab/nsp31422L1422ICtaAta11AY.350.000233
ORF1ab/nsp31422L1422LctActG11AY.360.000148
ORF1ab/nsp31422L1422delCTA---11AY.360.000148
ORF1ab/nsp31422L1422LCtaTta11AY.4.50.000107
ORF1ab/nsp31422L1422del2cTAc--11AY.420.00004
ORF1ab/nsp31422L1422LCtaTta11AY.460.000104
ORF1ab/nsp31422L1422LCtaTta11AY.480.000465
ORF1ab/nsp31422L1422delCTA---11AY.50.000021
ORF1ab/nsp31422L1422LCtaTta11AY.560.001605
ORF1ab/nsp31422L1422LCtaTta11AY.590.00053
ORF1ab/nsp31422L1422delCTA---11AY.600.000938
ORF1ab/nsp31422L1422LCtaTta11AY.610.000105
ORF1ab/nsp31422L1422delCTA---11AY.610.000105
ORF1ab/nsp31422L1422delCTA---11AY.720.001361
ORF1ab/nsp31422L1422delCTA---11AY.730.000665
ORF1ab/nsp31422L1422ICtaAta11AY.750.000056
ORF1ab/nsp31422L1422SCTAAGC11AY.75.10.00018
ORF1ab/nsp31422L1422LCtaTta11AY.770.001127
ORF1ab/nsp31422L1422VCtAGtT11AY.790.001211
ORF1ab/nsp31422L1422LCtaTta11AY.850.000427
ORF1ab/nsp31422L1422delCTA---11AY.9.20.000037
ORF1ab/nsp31422L1422ICtaAta11AY.920.000287
ORF1ab/nsp31422L1422delCTA---11AY.99.10.001553
ORF1ab/nsp31422L1422PcTacCa11B0.000128
ORF1ab/nsp31422L1422QcTacAa11B0.000128
ORF1ab/nsp31422L1422PcTacCa11B.10.000009
ORF1ab/nsp31422L1422QcTacAa11B.10.000009
ORF1ab/nsp31422L1422RcTacGa11B.1.10.000018
ORF1ab/nsp31422L1422LCtaTta11B.1.1.10.000327
ORF1ab/nsp31422L1422LCtaTta11B.1.1.1640.005155
ORF1ab/nsp31422L1422LCtaTta11B.1.1.2220.000204
ORF1ab/nsp31422L1422delCTA---11B.1.1.2360.006897
ORF1ab/nsp31422L1422LctActG11B.1.1.2700.010309
ORF1ab/nsp31422L1422LCtaTta11B.1.1.2790.001121
ORF1ab/nsp31422L1422LCtaTta11B.1.1.2840.000107
ORF1ab/nsp31422L1422LctActG11B.1.1.3010.001179
ORF1ab/nsp31422L1422TCTaACa11B.1.1.3060.000438
ORF1ab/nsp31422L1422delCTA---11B.1.1.3150.008475
ORF1ab/nsp31422L1422LCtaTta11B.1.1.3170.000412
ORF1ab/nsp31422L1422LCtaTta11B.1.1.3180.000302
ORF1ab/nsp31422L1422LCtaTta11B.1.1.330.000421
ORF1ab/nsp31422L1422LCtaTta11B.1.1.3520.03125
ORF1ab/nsp31422L1422delCTA---11B.1.1.370.000193
ORF1ab/nsp31422L1422LCtaTta11B.1.1.390.00051
ORF1ab/nsp31422L1422ICtaAta11B.1.1.3970.002252
ORF1ab/nsp31422L1422delCTA---11B.1.1.4090.002833
ORF1ab/nsp31422L1422delCTA---11B.1.1.510.001718
ORF1ab/nsp31422L1422LCtaTta11B.1.1.630.000386
ORF1ab/nsp31422L1422XCTaTAa11B.1.1.70.000001
ORF1ab/nsp31422L1422PcTacCa11B.1.1.70.000001
ORF1ab/nsp31422L1422delCTA---11B.1.1.700.000341
ORF1ab/nsp31422L1422LctActT11B.1.1.890.006061
ORF1ab/nsp31422L1422LctActT11B.1.1390.000733
ORF1ab/nsp31422L1422delCTA---11B.1.160.230.004831
ORF1ab/nsp31422L1422delCTA---11B.1.160.70.002079
ORF1ab/nsp31422L1422del1Cta-ta11B.1.1770.000013
ORF1ab/nsp31422L1422LCtaTta11B.1.177.120.000152
ORF1ab/nsp31422L1422delCTA---11B.1.177.150.000631
ORF1ab/nsp31422L1422LCtaTta11B.1.177.150.000631
ORF1ab/nsp31422L1422delCTA---11B.1.177.160.000664
ORF1ab/nsp31422L1422delCTA---11B.1.177.190.001431
ORF1ab/nsp31422L1422delCTA---11B.1.177.210.000076
ORF1ab/nsp31422L1422ICtaAta11B.1.177.30.007634
ORF1ab/nsp31422L1422delCTA---11B.1.177.480.003125
ORF1ab/nsp31422L1422delCTA---11B.1.177.540.000606
ORF1ab/nsp31422L1422LCtaTta11B.1.177.560.000668
ORF1ab/nsp31422L1422delCTA---11B.1.177.560.000668
ORF1ab/nsp31422L1422delCTA---11B.1.177.60.000977
ORF1ab/nsp31422L1422delCTA---11B.1.177.620.001192
ORF1ab/nsp31422L1422ICtaAta11B.1.177.650.000665
ORF1ab/nsp31422L1422delCTA---11B.1.177.680.015152
ORF1ab/nsp31422L1422delCTA---11B.1.177.760.002494
ORF1ab/nsp31422L1422LCtaTta11B.1.177.810.000189
ORF1ab/nsp31422L1422delCTA---11B.1.177.870.000728
ORF1ab/nsp31422L1422delCTA---11B.1.177.90.001332
ORF1ab/nsp31422L1422SCTaTCa11B.1.20.000009
ORF1ab/nsp31422L1422PcTacCa11B.1.20.000009
ORF1ab/nsp31422L1422ICtaAta11B.1.2210.000071
ORF1ab/nsp31422L1422PcTacCa11B.1.2320.000537
ORF1ab/nsp31422L1422delCTA---11B.1.2580.000067
ORF1ab/nsp31422L1422delCTA---11B.1.258.100.011364
ORF1ab/nsp31422L1422LCtaTta11B.1.3240.001605
ORF1ab/nsp31422L1422delCTA---11B.1.3510.00003
ORF1ab/nsp31422L1422VCtaGta11B.1.3510.00003
ORF1ab/nsp31422L1422ICtaAta11B.1.351.20.000303
ORF1ab/nsp31422L1422delCTA---11B.1.36.220.001208
ORF1ab/nsp31422L1422delCTA---11B.1.36.380.001642
ORF1ab/nsp31422L1422LctActG11B.1.3610.001289
ORF1ab/nsp31422L1422LctActG11B.1.3770.004566
ORF1ab/nsp31422L1422delCTA---11B.1.3890.001002
ORF1ab/nsp31422L1422LCtaTta11B.1.3960.000706
ORF1ab/nsp31422L1422LCtaTta11B.1.4150.014286
ORF1ab/nsp31422L1422LctActG11B.1.4160.001269
ORF1ab/nsp31422L1422delCTA---11B.1.416.10.001563
ORF1ab/nsp31422L1422QcTacAa11B.1.5100.026316
ORF1ab/nsp31422L1422KCTaAAa11B.1.5240.001406
ORF1ab/nsp31422L1422delCTA---11B.1.5250.000113
ORF1ab/nsp31422L1422LCtaTta11B.1.5260.000024
ORF1ab/nsp31422L1422LCtaTta11B.1.5750.000303
ORF1ab/nsp31422L1422delCTA---11B.1.5750.000303
ORF1ab/nsp31422L1422delCTA---11B.1.5960.000087
ORF1ab/nsp31422L1422LctActT11B.1.6090.000479
ORF1ab/nsp31422L1422VCtaGta11B.1.617.10.000129
ORF1ab/nsp31422L1422PcTacCa11B.1.617.10.000129
ORF1ab/nsp31422L1422del2CTAT--11B.1.617.20.000004
ORF1ab/nsp31422L1422delCTA---11B.1.6210.000089
ORF1ab/nsp31422L1422delCTA---11B.1.621.10.000506
ORF1ab/nsp31422L1422delCTA---11B.1.6300.005236
ORF1ab/nsp31422L1422PcTacCa11B.600.015873
ORF1ab/nsp31422L1422LCtaTta11C.350.000774
ORF1ab/nsp31422L1422LctActG11C.370.000116
ORF1ab/nsp31422L1422LCtaTta11N.30.005814
ORF1ab/nsp31422L1422ICtaAta11P.10.000016
ORF1ab/nsp31422L1422ICtaAta11P.1.10.10.00813
ORF1ab/nsp31422L1422LCtaTta11P.1.150.000232
ORF1ab/nsp31422L1422delCTA---11P.1.150.000232
ORF1ab/nsp31422L1422LCtaTta11P.1.20.001156

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.