CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1417 & Codon = cCa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31417L1417PL2235PnonsyncTacCa1041020.9807696968-6970

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31417L1417PcTacCa102104All0.00002
ORF1ab/nsp31417L1417PcTacCa4444B.1.10.000798
ORF1ab/nsp31417L1417PcTacCa1111N.40.046809
ORF1ab/nsp31417L1417PcTacCa77AY.40.000011
ORF1ab/nsp31417L1417PcTacCa55AY.440.00003
ORF1ab/nsp31417L1417PcTacCa44AY.1030.000025
ORF1ab/nsp31417L1417PcTacCa33AY.250.000018
ORF1ab/nsp31417L1417PcTacCa33AY.4.50.000322
ORF1ab/nsp31417L1417PcTacCa33B.1.617.20.000011
ORF1ab/nsp31417L1417PcTacCa120.055556
ORF1ab/nsp31417L1417PcTacCa22AY.1210.000271
ORF1ab/nsp31417L1417PcTacCa22AY.430.000009
ORF1ab/nsp31417L1417PcTacCa22B.1.1.70.000002
ORF1ab/nsp31417L1417PcTacCa12B.1.2210.000071
ORF1ab/nsp31417L1417PcTacCa22B.1.4350.022727
ORF1ab/nsp31417L1417PcTacCa22B.1.5260.000047
ORF1ab/nsp31417L1417PcTacCa11AY.330.000067
ORF1ab/nsp31417L1417PcTacCa11AY.470.000031
ORF1ab/nsp31417L1417PcTacCa11B.10.000009
ORF1ab/nsp31417L1417PcTacCa11B.1.1.2140.000055
ORF1ab/nsp31417L1417PcTacCa11B.1.1.580.005376
ORF1ab/nsp31417L1417PcTacCa11B.1.2580.000067
ORF1ab/nsp31417L1417PcTacCa11B.1.4970.000315
ORF1ab/nsp31417L1417PcTacCa11B.400.000364
ORF1ab/nsp31417L1417PcTacCa11C.180.002591
ORF1ab/nsp31417L1417PcTacCa11D.20.000075