CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1405 & Codon = tCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31405F1405SF2223SnonsyntTttCt23190.8260876932-6934

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31405F1405StTttCt1923All0.000004
ORF1ab/nsp31405F1405StTttCt37B.1.1.70.000003
ORF1ab/nsp31405F1405StTttCt44B.1.10.000073
ORF1ab/nsp31405F1405StTttCt22B.10.000018
ORF1ab/nsp31405F1405StTttCt11AY.1140.000231
ORF1ab/nsp31405F1405StTttCt11AY.140.000088
ORF1ab/nsp31405F1405StTttCt11AY.23.10.000417
ORF1ab/nsp31405F1405StTttCt11AY.40.000002
ORF1ab/nsp31405F1405StTttCt11B.1.1.390.00051
ORF1ab/nsp31405F1405StTttCt11B.1.160.290.004219
ORF1ab/nsp31405F1405StTttCt11B.1.258.140.00098
ORF1ab/nsp31405F1405StTttCt11B.1.3510.00003
ORF1ab/nsp31405F1405StTttCt11B.1.3670.000792
ORF1ab/nsp31405F1405StTttCt11B.1.5960.000087