CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1393

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31393L1393LL2211LsynCtaTta10446103640.992156896-6898
ORF1ab/nsp31393L1393LL2211LsynctActG10446690.00660546896-6898
ORF1ab/nsp31393L1393LL2211LsynctActT1044680.0007658436896-6898
ORF1ab/nsp31393L1393LL2211LsynctActC1044640.0003829226896-6898
ORF1ab/nsp31393L1393LL2211LsynCtATtG1044610.00009573046896-6898
ORF1ab/nsp31393L1393delL2211deldelCTA---22222216896-6898
ORF1ab/nsp31393L1393IL2211InonsynCtaAta878716896-6898
ORF1ab/nsp31393L1393QL2211QnonsyncTacAa252516896-6898
ORF1ab/nsp31393L1393PL2211PnonsyncTacCa1390.6923086896-6898
ORF1ab/nsp31393L1393PL2211PnonsyncTAcCT1320.1538466896-6898
ORF1ab/nsp31393L1393PL2211PnonsyncTAcCG1310.07692316896-6898
ORF1ab/nsp31393L1393PL2211PnonsyncTAcCC1310.07692316896-6898
ORF1ab/nsp31393L1393VL2211VnonsynCtaGta101016896-6898
ORF1ab/nsp31393L1393SL2211SnonsynCTaTCa4416896-6898
ORF1ab/nsp31393L1393del2L2211del2delCTa--a420.56896-6898
ORF1ab/nsp31393L1393del2L2211del2delcTAc--420.56896-6898
ORF1ab/nsp31393L1393GL2211GnonsynCTAGGG320.6666676896-6898
ORF1ab/nsp31393L1393GL2211GnonsynCTaGGa310.3333336896-6898
ORF1ab/nsp31393L1393RL2211RnonsyncTacGa2216896-6898
ORF1ab/nsp31393L1393XL2211XnonsynCTaTAa210.56896-6898
ORF1ab/nsp31393L1393XL2211XnonsynCTATAG210.56896-6898
ORF1ab/nsp31393L1393del1L2211del1delCta-ta210.56896-6898
ORF1ab/nsp31393L1393del1L2211del1delCTA-NN210.56896-6898
ORF1ab/nsp31393L1393FL2211FnonsynCtATtT1116896-6898
ORF1ab/nsp31393L1393HL2211HnonsyncTAcAT1116896-6898

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31393L1393LCtaTta1036410446All0.001982
ORF1ab/nsp31393L1393LctActG6910446All0.000013
ORF1ab/nsp31393L1393LctActT810446All0.000002
ORF1ab/nsp31393L1393LctActC410446All0.000001
ORF1ab/nsp31393L1393LCtATtG110446All0
ORF1ab/nsp31393L1393LCtaTta19431954B.1.1.70.001739
ORF1ab/nsp31393L1393LctActG61954B.1.1.70.000005
ORF1ab/nsp31393L1393LctActT41954B.1.1.70.000004
ORF1ab/nsp31393L1393LctActC11954B.1.1.70.000001
ORF1ab/nsp31393L1393LCtaTta14511451B.1.617.20.005464
ORF1ab/nsp31393L1393LCtaTta925926AY.1000.042556
ORF1ab/nsp31393L1393LctActG1926AY.1000.000046
ORF1ab/nsp31393L1393LCtaTta604611AY.40.00094
ORF1ab/nsp31393L1393LctActG5611AY.40.000008
ORF1ab/nsp31393L1393LctActC1611AY.40.000002
ORF1ab/nsp31393L1393LctActT1611AY.40.000002
ORF1ab/nsp31393L1393LCtaTta540540B.1.4040.703125
ORF1ab/nsp31393L1393LCtaTta490490B.1.1.700.167121
ORF1ab/nsp31393L1393LCtaTta337337B.1.177.100.295874
ORF1ab/nsp31393L1393LCtaTta320321B.1.20.002818
ORF1ab/nsp31393L1393LctActC1321B.1.20.000009
ORF1ab/nsp31393L1393delCTA---222222All0.000042
ORF1ab/nsp31393L1393LCtaTta215216AY.1030.001335
ORF1ab/nsp31393L1393LctActG1216AY.1030.000006
ORF1ab/nsp31393L1393LCtaTta204207B.1.1600.006362
ORF1ab/nsp31393L1393LctActG2207B.1.1600.000062
ORF1ab/nsp31393L1393LctActC1207B.1.1600.000031
ORF1ab/nsp31393L1393LCtaTta158158AY.440.000962
ORF1ab/nsp31393L1393LCtaTta153153B.1.5770.105155
ORF1ab/nsp31393L1393LCtaTta147147C.370.017061
ORF1ab/nsp31393L1393LCtaTta133140B.10.001218
ORF1ab/nsp31393L1393LctActG7140B.10.000064
ORF1ab/nsp31393L1393LCtaTta130133B.1.1770.001712
ORF1ab/nsp31393L1393LctActG3133B.1.1770.00004
ORF1ab/nsp31393L1393LCtaTta115116AY.430.00051
ORF1ab/nsp31393L1393LctActT1116AY.430.000004
ORF1ab/nsp31393L1393LCtaTta107108AY.30.001064
ORF1ab/nsp31393L1393LctActG1108AY.30.00001
ORF1ab/nsp31393L1393LCtaTta107107B.1.2580.007121
ORF1ab/nsp31393L1393LCtaTta104104B.1.2430.007237
ORF1ab/nsp31393L1393ICtaAta8787All0.000017
ORF1ab/nsp31393L1393LCtaTta8387AY.250.000499
ORF1ab/nsp31393L1393LctActG387AY.250.000018
ORF1ab/nsp31393L1393LctActT187AY.250.000006
ORF1ab/nsp31393L1393LCtaTta8080B.1.1.1530.087623
ORF1ab/nsp31393L1393LCtaTta7676P.10.001197
ORF1ab/nsp31393L1393LCtaTta7172AY.390.001755
ORF1ab/nsp31393L1393LctActG172AY.390.000025
ORF1ab/nsp31393L1393LCtaTta7070AY.5.40.019369
ORF1ab/nsp31393L1393LCtaTta6970B.1.1.5190.00274
ORF1ab/nsp31393L1393LctActG170B.1.1.5190.00004
ORF1ab/nsp31393L1393delCTA---6969B.1.1.70.000062
ORF1ab/nsp31393L1393LCtaTta6060AY.200.002332
ORF1ab/nsp31393L1393LCtaTta5555B.1.4270.002777
ORF1ab/nsp31393L1393LCtaTta4950B.1.3510.001457
ORF1ab/nsp31393L1393LCtATtG150B.1.3510.00003
ORF1ab/nsp31393L1393LCtaTta3248AY.4.20.000694
ORF1ab/nsp31393L1393LctActG1648AY.4.20.000347
ORF1ab/nsp31393L1393LCtaTta4545AY.99.20.004147
ORF1ab/nsp31393L1393LCtaTta4545B.1.5250.005092
ORF1ab/nsp31393L1393LCtaTta4344B.1.4290.001012
ORF1ab/nsp31393L1393LctActG144B.1.4290.000024
ORF1ab/nsp31393L1393LCtaTta3941AY.290.000615
ORF1ab/nsp31393L1393LctActG241AY.290.000032
ORF1ab/nsp31393L1393LCtaTta3839B.1.10.000689
ORF1ab/nsp31393L1393LctActG139B.1.10.000018
ORF1ab/nsp31393L1393LCtaTta3737AY.29.10.008159
ORF1ab/nsp31393L1393LCtaTta3232AY.1130.004556
ORF1ab/nsp31393L1393LCtaTta3030AY.1090.022189
ORF1ab/nsp31393L1393LCtaTta3030B.1.1.2280.091463
ORF1ab/nsp31393L1393LCtaTta2929B.1.621.10.014669
ORF1ab/nsp31393L1393LCtaTta2828B.1.214.10.56
ORF1ab/nsp31393L1393LCtaTta2728B.1.2210.001918
ORF1ab/nsp31393L1393LctActG128B.1.2210.000071
ORF1ab/nsp31393L1393LCtaTta2828B.1.6210.002479
ORF1ab/nsp31393L1393ICtaAta2727B.1.20.000238
ORF1ab/nsp31393L1393LCtaTta2727B.1.6260.154286
ORF1ab/nsp31393L1393LCtaTta2526AY.1170.002113
ORF1ab/nsp31393L1393LctActG126AY.1170.000085
ORF1ab/nsp31393L1393LCtaTta2626B.1.360.003793
ORF1ab/nsp31393L1393QcTacAa2525All0.000005
ORF1ab/nsp31393L1393LCtaTta2525AY.1020.000663
ORF1ab/nsp31393L1393LCtaTta2323AY.1190.000812
ORF1ab/nsp31393L1393LCtaTta2323AY.50.000475
ORF1ab/nsp31393L1393LCtaTta2323AY.60.000946
ORF1ab/nsp31393L1393LCtaTta2222AY.9.20.000808
ORF1ab/nsp31393L1393LCtaTta2222B.1.177.810.004165
ORF1ab/nsp31393L1393LCtaTta2121B.1.177.210.001606
ORF1ab/nsp31393L1393LCtaTta1919AY.1110.00348
ORF1ab/nsp31393L1393LCtaTta1719AY.230.001186
ORF1ab/nsp31393L1393LctActG219AY.230.000139
ORF1ab/nsp31393L1393LCtaTta1919AY.330.001269
ORF1ab/nsp31393L1393LCtaTta1919B.1.1.2220.003876
ORF1ab/nsp31393L1393LCtaTta1818AY.39.10.000713
ORF1ab/nsp31393L1393QcTacAa1818AY.40.000028
ORF1ab/nsp31393L1393delCTA---1717AY.40.000026
ORF1ab/nsp31393L1393LCtaTta1717AY.420.000684
ORF1ab/nsp31393L1393LCtaTta1717B.1.177.580.022636
ORF1ab/nsp31393L1393LCtaTta1717B.1.5260.0004
ORF1ab/nsp31393L1393LCtaTta1616P.1.140.000765
ORF1ab/nsp31393L1393LCtaTta1515AY.770.016911
ORF1ab/nsp31393L1393delCTA---1515B.1.1770.000198
ORF1ab/nsp31393L1393LCtaTta1515Q.80.002474
ORF1ab/nsp31393L1393LCtaTta1414AY.260.000396
ORF1ab/nsp31393L1393LCtaTta1414AY.5.30.004723
ORF1ab/nsp31393L1393delCTA---1414B.10.000128
ORF1ab/nsp31393L1393PcTacCa913All0.000002
ORF1ab/nsp31393L1393PcTAcCT213All0
ORF1ab/nsp31393L1393PcTAcCG113All0
ORF1ab/nsp31393L1393PcTAcCC113All0
ORF1ab/nsp31393L1393LCtaTta1313B.1.177.170.010673
ORF1ab/nsp31393L1393LCtaTta1212B.1.5820.005888
ORF1ab/nsp31393L1393LCtaTta1111AY.710.005226
ORF1ab/nsp31393L1393LCtaTta1111B.1.1.1280.078014
ORF1ab/nsp31393L1393LCtaTta1111B.1.2340.001451
ORF1ab/nsp31393L1393VCtaGta1010All0.000002
ORF1ab/nsp31393L1393LCtaTta1010AY.1200.000372
ORF1ab/nsp31393L1393LCtaTta910AY.3.10.000767
ORF1ab/nsp31393L1393LctActG110AY.3.10.000085
ORF1ab/nsp31393L1393LCtaTta1010AY.700.002085
ORF1ab/nsp31393L1393LCtaTta1010B.1.177.510.045662
ORF1ab/nsp31393L1393delCTA---1010B.1.20.000088
ORF1ab/nsp31393L1393ICtaAta1010P.10.000158
ORF1ab/nsp31393L1393ICtaAta99AY.360.001334
ORF1ab/nsp31393L1393LCtaTta99AY.610.000943
ORF1ab/nsp31393L1393LCtaTta89B.1.1.2140.000444
ORF1ab/nsp31393L1393LctActG19B.1.1.2140.000055
ORF1ab/nsp31393L1393LCtaTta99B.1.4330.028754
ORF1ab/nsp31393L1393LCtaTta99P.1.150.002091
ORF1ab/nsp31393L1393LCtaTta99R.10.00081
ORF1ab/nsp31393L1393LCtaTta88AY.1180.000501
ORF1ab/nsp31393L1393LCtaTta88AY.450.000973
ORF1ab/nsp31393L1393LCtaTta88AY.460.000833
ORF1ab/nsp31393L1393LCtaTta88AY.790.009685
ORF1ab/nsp31393L1393LCtaTta88AY.980.000632
ORF1ab/nsp31393L1393delCTA---88B.1.10.000145
ORF1ab/nsp31393L1393LCtaTta88B.1.36.290.004139
ORF1ab/nsp31393L1393LCtaTta88B.1.5750.002427
ORF1ab/nsp31393L1393LCtaTta88P.1.100.002156
ORF1ab/nsp31393L1393LCtaTta88Q.30.00116
ORF1ab/nsp31393L1393LCtaTta77AY.1070.003262
ORF1ab/nsp31393L1393ICtaAta77B.1.1.70.000006
ORF1ab/nsp31393L1393LCtaTta57D.20.000375
ORF1ab/nsp31393L1393LctActG27D.20.00015
ORF1ab/nsp31393L1393LCtaTta66AY.46.60.000433
ORF1ab/nsp31393L1393LCtaTta66AY.90.000406
ORF1ab/nsp31393L1393LCtaTta56B.1.1.3010.005896
ORF1ab/nsp31393L1393LctActG16B.1.1.3010.001179
ORF1ab/nsp31393L1393LCtaTta66B.1.5960.000523
ORF1ab/nsp31393L1393LCtaTta56B.1.617.10.000645
ORF1ab/nsp31393L1393LctActG16B.1.617.10.000129
ORF1ab/nsp31393L1393LCtaTta66C.350.004644
ORF1ab/nsp31393L1393LCtaTta55AY.1100.000563
ORF1ab/nsp31393L1393LCtaTta55AY.120.00158
ORF1ab/nsp31393L1393LCtaTta55AY.360.000741
ORF1ab/nsp31393L1393LCtaTta55B.1.1.2410.010352
ORF1ab/nsp31393L1393LCtaTta55B.1.1.2840.000537
ORF1ab/nsp31393L1393LCtaTta55B.1.1.3110.001791
ORF1ab/nsp31393L1393PcTacCa45B.1.1.70.000004
ORF1ab/nsp31393L1393PcTAcCC15B.1.1.70.000001
ORF1ab/nsp31393L1393LCtaTta55B.1.160.140.010593
ORF1ab/nsp31393L1393LCtaTta55B.1.160.260.012107
ORF1ab/nsp31393L1393LCtaTta55B.1.3960.003529
ORF1ab/nsp31393L1393ICtaAta55P.1.140.000239
ORF1ab/nsp31393L1393delCTA---440.222222
ORF1ab/nsp31393L1393SCTaTCa44All0.000001
ORF1ab/nsp31393L1393del2CTa--a24All0
ORF1ab/nsp31393L1393del2cTAc--24All0
ORF1ab/nsp31393L1393LCtaTta44AY.270.000259
ORF1ab/nsp31393L1393LCtaTta44AY.34.10.00204
ORF1ab/nsp31393L1393LCtaTta44AY.350.000932
ORF1ab/nsp31393L1393delCTA---44AY.430.000018
ORF1ab/nsp31393L1393LctActG34AY.470.000093
ORF1ab/nsp31393L1393LCtaTta14AY.470.000031
ORF1ab/nsp31393L1393LCtaTta44AY.70.000784
ORF1ab/nsp31393L1393LCtaTta44AY.740.000463
ORF1ab/nsp31393L1393ICtaAta44AY.90.00027
ORF1ab/nsp31393L1393LCtaTta44B.1.110.30.002874
ORF1ab/nsp31393L1393LCtaTta44B.1.177.40.000844
ORF1ab/nsp31393L1393LCtaTta44B.1.2060.003263
ORF1ab/nsp31393L1393delCTA---44B.1.2210.000284
ORF1ab/nsp31393L1393LCtaTta44B.1.2390.004884
ORF1ab/nsp31393L1393LCtaTta44B.1.36.170.001976
ORF1ab/nsp31393L1393LCtaTta44B.1.5230.009804
ORF1ab/nsp31393L1393LCtaTta44B.1.5880.00364
ORF1ab/nsp31393L1393LCtaTta44B.1.5950.001044
ORF1ab/nsp31393L1393delCTA---44B.1.617.20.000015
ORF1ab/nsp31393L1393LCtaTta44B.320.108108
ORF1ab/nsp31393L1393VCtaGta44P.1.170.000647
ORF1ab/nsp31393L1393LCtaTta44Q.40.001819
ORF1ab/nsp31393L1393PcTacCa130.055556
ORF1ab/nsp31393L1393PcTAcCT130.055556
ORF1ab/nsp31393L1393PcTAcCG130.055556
ORF1ab/nsp31393L1393GCTAGGG23All0
ORF1ab/nsp31393L1393GCTaGGa13All0
ORF1ab/nsp31393L1393LCtaTta33AY.10.001187
ORF1ab/nsp31393L1393LCtaTta33AY.240.001293
ORF1ab/nsp31393L1393LCtaTta33AY.320.001597
ORF1ab/nsp31393L1393LCtaTta33AY.340.000291
ORF1ab/nsp31393L1393delCTA---33AY.4.50.000322
ORF1ab/nsp31393L1393LCtaTta33AY.730.001996
ORF1ab/nsp31393L1393LCtaTta33AY.750.000168
ORF1ab/nsp31393L1393LCtaTta33AY.860.00249
ORF1ab/nsp31393L1393LCtaTta33AY.9.10.000251
ORF1ab/nsp31393L1393LCtaTta33AY.98.10.000145
ORF1ab/nsp31393L1393LCtaTta33B.1.1.1590.014019
ORF1ab/nsp31393L1393LCtaTta33B.1.1.1610.010601
ORF1ab/nsp31393L1393LCtaTta33B.1.1.2740.015152
ORF1ab/nsp31393L1393LCtaTta33B.1.1.280.000934
ORF1ab/nsp31393L1393LCtaTta33B.1.1.2970.006711
ORF1ab/nsp31393L1393LCtaTta33B.1.1.3060.001315
ORF1ab/nsp31393L1393LCtaTta33B.1.1.3170.001235
ORF1ab/nsp31393L1393LCtaTta33B.1.1.3970.006757
ORF1ab/nsp31393L1393LCtaTta33B.1.1.4340.001046
ORF1ab/nsp31393L1393LCtaTta33B.1.1.5260.010638
ORF1ab/nsp31393L1393LCtaTta33B.1.160.160.002788
ORF1ab/nsp31393L1393LCtaTta33B.1.160.80.003866
ORF1ab/nsp31393L1393VCtaGta33B.1.1770.00004
ORF1ab/nsp31393L1393LCtaTta33B.1.177.860.00055
ORF1ab/nsp31393L1393LCtaTta33B.1.258.170.000312
ORF1ab/nsp31393L1393LCtaTta33B.1.3290.001823
ORF1ab/nsp31393L1393LCtaTta33B.1.351.20.000908
ORF1ab/nsp31393L1393LCtaTta33B.1.4680.017143
ORF1ab/nsp31393L1393LCtaTta33B.1.5170.001281
ORF1ab/nsp31393L1393delCTA---33B.1.5250.000339
ORF1ab/nsp31393L1393LCtaTta33B.1.5560.022556
ORF1ab/nsp31393L1393delCTA---33B.1.5960.000261
ORF1ab/nsp31393L1393LCtaTta33B.1.6090.001438
ORF1ab/nsp31393L1393LCtaTta33B.1.6370.000219
ORF1ab/nsp31393L1393LCtaTta23P.20.000373
ORF1ab/nsp31393L1393LctActG13P.20.000187
ORF1ab/nsp31393L1393LCtaTta33Q.20.00184
ORF1ab/nsp31393L1393GCTAGGG220.111111
ORF1ab/nsp31393L1393SCTaTCa220.111111
ORF1ab/nsp31393L1393LctActT120.055556
ORF1ab/nsp31393L1393LctActG120.055556
ORF1ab/nsp31393L1393delCTA---22A.2.40.006734
ORF1ab/nsp31393L1393LCtaTta22A.2.50.000998
ORF1ab/nsp31393L1393LCtaTta22A.23.10.001408
ORF1ab/nsp31393L1393RcTacGa22All0
ORF1ab/nsp31393L1393del1CTA-NN12All0
ORF1ab/nsp31393L1393XCTATAG12All0
ORF1ab/nsp31393L1393XCTaTAa12All0
ORF1ab/nsp31393L1393del1Cta-ta12All0
ORF1ab/nsp31393L1393LCtaTta22AM.40.007143
ORF1ab/nsp31393L1393LCtaTta22AP.10.003003
ORF1ab/nsp31393L1393LCtaTta22AY.1060.00067
ORF1ab/nsp31393L1393LCtaTta22AY.130.000322
ORF1ab/nsp31393L1393LCtaTta22AY.300.000791
ORF1ab/nsp31393L1393LCtaTta22AY.410.000588
ORF1ab/nsp31393L1393ICtaAta22AY.440.000012
ORF1ab/nsp31393L1393LCtaTta22AY.620.000871
ORF1ab/nsp31393L1393LCtaTta22AY.7.10.000225
ORF1ab/nsp31393L1393LCtaTta22AY.75.10.000361
ORF1ab/nsp31393L1393LCtaTta22AY.840.000875
ORF1ab/nsp31393L1393LCtaTta22AY.850.000854
ORF1ab/nsp31393L1393LCtaTta22AY.990.002099
ORF1ab/nsp31393L1393ICtaAta22B.10.000018
ORF1ab/nsp31393L1393LCtaTta22B.1.1.10.000653
ORF1ab/nsp31393L1393LCtaTta22B.1.1.2160.001781
ORF1ab/nsp31393L1393LCtaTta22B.1.1.4660.017391
ORF1ab/nsp31393L1393LCtaTta22B.1.1.4870.011173
ORF1ab/nsp31393L1393LCtaTta22B.1.1.510.003436
ORF1ab/nsp31393L1393QcTacAa22B.1.1.70.000002
ORF1ab/nsp31393L1393ICtaAta22B.1.1770.000026
ORF1ab/nsp31393L1393delCTA---22B.1.177.180.00232
ORF1ab/nsp31393L1393LCtaTta22B.1.177.50.002484
ORF1ab/nsp31393L1393LCtaTta22B.1.177.600.000437
ORF1ab/nsp31393L1393LCtaTta22B.1.2410.001623
ORF1ab/nsp31393L1393delCTA---22B.1.2580.000133
ORF1ab/nsp31393L1393LCtaTta22B.1.3110.000549
ORF1ab/nsp31393L1393delCTA---22B.1.3110.000549
ORF1ab/nsp31393L1393LCtaTta22B.1.3380.017241
ORF1ab/nsp31393L1393LctActG12B.1.3490.000715
ORF1ab/nsp31393L1393LCtaTta12B.1.3490.000715
ORF1ab/nsp31393L1393LCtaTta22B.1.36.220.002415
ORF1ab/nsp31393L1393LCtaTta22B.1.36.80.002
ORF1ab/nsp31393L1393LCtaTta22B.1.3890.002004
ORF1ab/nsp31393L1393LCtaTta22B.1.438.10.000215
ORF1ab/nsp31393L1393delCTA---22B.1.5170.000854
ORF1ab/nsp31393L1393LctActG12B.1.5610.000397
ORF1ab/nsp31393L1393LCtaTta12B.1.5610.000397
ORF1ab/nsp31393L1393LCtaTta22B.1.5680.002222
ORF1ab/nsp31393L1393LCtaTta22B.1.6120.005305
ORF1ab/nsp31393L1393ICtaAta22B.1.617.20.000008
ORF1ab/nsp31393L1393LCtaTta22B.1.6190.001742
ORF1ab/nsp31393L1393LCtaTta22B.610.011494
ORF1ab/nsp31393L1393LCtaTta22C.110.021277
ORF1ab/nsp31393L1393LCtaTta22C.37.10.005236
ORF1ab/nsp31393L1393LCtaTta22N.50.003534
ORF1ab/nsp31393L1393delCTA---22P.10.000032
ORF1ab/nsp31393L1393LCtaTta22P.1.40.001953
ORF1ab/nsp31393L1393LCtaTta11A.10.000282
ORF1ab/nsp31393L1393LCtaTta11A.2.40.003367
ORF1ab/nsp31393L1393delCTA---11A.280.002646
ORF1ab/nsp31393L1393LCtaTta11AL.10.012987
ORF1ab/nsp31393L1393FCtATtT11All0
ORF1ab/nsp31393L1393HcTAcAT11All0
ORF1ab/nsp31393L1393delCTA---11AV.10.005051
ORF1ab/nsp31393L1393delCTA---11AY.1000.000046
ORF1ab/nsp31393L1393LCtaTta11AY.1010.00049
ORF1ab/nsp31393L1393ICtaAta11AY.1020.000027
ORF1ab/nsp31393L1393ICtaAta11AY.1030.000006
ORF1ab/nsp31393L1393LCtaTta11AY.1050.000643
ORF1ab/nsp31393L1393LCtaTta11AY.1140.000231
ORF1ab/nsp31393L1393LCtaTta11AY.1160.000287
ORF1ab/nsp31393L1393QcTacAa11AY.1180.000063
ORF1ab/nsp31393L1393delCTA---11AY.1200.000037
ORF1ab/nsp31393L1393LCtaTta11AY.1210.000135
ORF1ab/nsp31393L1393LCtaTta11AY.16.10.00047
ORF1ab/nsp31393L1393delCTA---11AY.240.000431
ORF1ab/nsp31393L1393PcTacCa11AY.30.00001
ORF1ab/nsp31393L1393SCTaTCa11AY.30.00001
ORF1ab/nsp31393L1393ICtaAta11AY.320.000532
ORF1ab/nsp31393L1393QcTacAa11AY.34.10.00051
ORF1ab/nsp31393L1393delCTA---11AY.360.000148
ORF1ab/nsp31393L1393LCtaTta11AY.370.000316
ORF1ab/nsp31393L1393delCTA---11AY.390.000025
ORF1ab/nsp31393L1393ICtaAta11AY.4.20.000022
ORF1ab/nsp31393L1393LCtaTta11AY.4.50.000107
ORF1ab/nsp31393L1393VCtaGta11AY.4.50.000107
ORF1ab/nsp31393L1393QcTacAa11AY.460.000104
ORF1ab/nsp31393L1393LCtaTta11AY.46.10.001027
ORF1ab/nsp31393L1393LCtaTta11AY.46.40.000165
ORF1ab/nsp31393L1393delCTA---11AY.470.000031
ORF1ab/nsp31393L1393delCTA---11AY.50.000021
ORF1ab/nsp31393L1393ICtaAta11AY.50.000021
ORF1ab/nsp31393L1393LCtaTta11AY.530.000288
ORF1ab/nsp31393L1393ICtaAta11AY.550.000917
ORF1ab/nsp31393L1393LCtaTta11AY.550.000917
ORF1ab/nsp31393L1393LCtaTta11AY.590.00053
ORF1ab/nsp31393L1393LCtaTta11AY.640.000595
ORF1ab/nsp31393L1393LCtaTta11AY.650.000533
ORF1ab/nsp31393L1393LCtaTta11AY.660.00107
ORF1ab/nsp31393L1393LCtaTta11AY.670.000464
ORF1ab/nsp31393L1393LCtaTta11AY.680.000274
ORF1ab/nsp31393L1393delCTA---11AY.680.000274
ORF1ab/nsp31393L1393delCTA---11AY.730.000665
ORF1ab/nsp31393L1393delCTA---11AY.75.10.00018
ORF1ab/nsp31393L1393LCtaTta11AY.880.000884
ORF1ab/nsp31393L1393delCTA---11AY.9.20.000037
ORF1ab/nsp31393L1393LCtaTta11AY.970.001701
ORF1ab/nsp31393L1393ICtaAta11B0.000128
ORF1ab/nsp31393L1393HcTAcAT11B.10.000009
ORF1ab/nsp31393L1393QcTacAa11B.10.000009
ORF1ab/nsp31393L1393GCTaGGa11B.10.000009
ORF1ab/nsp31393L1393LCtaTta11B.1.1.100.001115
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1010.01
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1290.009174
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1410.002012
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1700.001247
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1870.00885
ORF1ab/nsp31393L1393delCTA---11B.1.1.1920.002309
ORF1ab/nsp31393L1393LCtaTta11B.1.1.1920.002309
ORF1ab/nsp31393L1393delCTA---11B.1.1.2180.007692
ORF1ab/nsp31393L1393LCtaTta11B.1.1.2580.003257
ORF1ab/nsp31393L1393LCtaTta11B.1.1.2770.000759
ORF1ab/nsp31393L1393ICtaAta11B.1.1.280.000311
ORF1ab/nsp31393L1393QcTacAa11B.1.1.3050.003861
ORF1ab/nsp31393L1393delCTA---11B.1.1.3110.000358
ORF1ab/nsp31393L1393delCTA---11B.1.1.3120.001912
ORF1ab/nsp31393L1393delCTA---11B.1.1.3150.008475
ORF1ab/nsp31393L1393LCtaTta11B.1.1.3180.000302
ORF1ab/nsp31393L1393PcTacCa11B.1.1.3260.001761
ORF1ab/nsp31393L1393LCtaTta11B.1.1.330.000421
ORF1ab/nsp31393L1393delCTA---11B.1.1.3480.000796
ORF1ab/nsp31393L1393LCtaTta11B.1.1.3520.03125
ORF1ab/nsp31393L1393LCtaTta11B.1.1.3690.000446
ORF1ab/nsp31393L1393del1Cta-ta11B.1.1.3690.000446
ORF1ab/nsp31393L1393LctActG11B.1.1.3720.000689
ORF1ab/nsp31393L1393LCtaTta11B.1.1.3810.04
ORF1ab/nsp31393L1393PcTacCa11B.1.1.3850.004464
ORF1ab/nsp31393L1393delCTA---11B.1.1.4090.002833
ORF1ab/nsp31393L1393LCtaTta11B.1.1.4090.002833
ORF1ab/nsp31393L1393FCtATtT11B.1.1.70.000001
ORF1ab/nsp31393L1393SCTaTCa11B.1.1.70.000001
ORF1ab/nsp31393L1393del1CTA-NN11B.1.1.70.000001
ORF1ab/nsp31393L1393del2CTa--a11B.1.1.70.000001
ORF1ab/nsp31393L1393delCTA---11B.1.1.700.000341
ORF1ab/nsp31393L1393LCtaTta11B.1.1260.001276
ORF1ab/nsp31393L1393LCtaTta11B.1.1460.004237
ORF1ab/nsp31393L1393delCTA---11B.1.1600.000031
ORF1ab/nsp31393L1393ICtaAta11B.1.160.110.005714
ORF1ab/nsp31393L1393LCtaTta11B.1.160.220.006757
ORF1ab/nsp31393L1393LCtaTta11B.1.160.320.004292
ORF1ab/nsp31393L1393delCTA---11B.1.160.70.002079
ORF1ab/nsp31393L1393LCtaTta11B.1.1620.005025
ORF1ab/nsp31393L1393del2cTAc--11B.1.1770.000013
ORF1ab/nsp31393L1393PcTacCa11B.1.1770.000013
ORF1ab/nsp31393L1393delCTA---11B.1.177.150.000631
ORF1ab/nsp31393L1393LCtaTta11B.1.177.180.00116
ORF1ab/nsp31393L1393ICtaAta11B.1.177.320.00135
ORF1ab/nsp31393L1393delCTA---11B.1.177.40.000211
ORF1ab/nsp31393L1393del2cTAc--11B.1.177.40.000211
ORF1ab/nsp31393L1393LCtaTta11B.1.177.430.001477
ORF1ab/nsp31393L1393LCtaTta11B.1.177.440.000519
ORF1ab/nsp31393L1393LCtaTta11B.1.177.480.003125
ORF1ab/nsp31393L1393LCtaTta11B.1.177.520.001757
ORF1ab/nsp31393L1393delCTA---11B.1.177.540.000606
ORF1ab/nsp31393L1393delCTA---11B.1.177.560.000668
ORF1ab/nsp31393L1393delCTA---11B.1.177.570.000281
ORF1ab/nsp31393L1393LCtaTta11B.1.177.570.000281
ORF1ab/nsp31393L1393delCTA---11B.1.177.60.000977
ORF1ab/nsp31393L1393delCTA---11B.1.177.620.001192
ORF1ab/nsp31393L1393delCTA---11B.1.177.680.015152
ORF1ab/nsp31393L1393LCtaTta11B.1.177.690.001484
ORF1ab/nsp31393L1393delCTA---11B.1.177.70.000165
ORF1ab/nsp31393L1393LCtaTta11B.1.177.750.001041
ORF1ab/nsp31393L1393delCTA---11B.1.177.810.000189
ORF1ab/nsp31393L1393LCtaTta11B.1.177.820.000477
ORF1ab/nsp31393L1393delCTA---11B.1.177.870.000728
ORF1ab/nsp31393L1393delCTA---11B.1.177.90.001332
ORF1ab/nsp31393L1393LCtaTta11B.1.177.90.001332
ORF1ab/nsp31393L1393LCtaTta11B.1.214.30.007143
ORF1ab/nsp31393L1393LCtaTta11B.1.221.10.002907
ORF1ab/nsp31393L1393ICtaAta11B.1.2230.002778
ORF1ab/nsp31393L1393LCtaTta11B.1.2230.002778
ORF1ab/nsp31393L1393LCtaTta11B.1.2310.032258
ORF1ab/nsp31393L1393LCtaTta11B.1.2400.000216
ORF1ab/nsp31393L1393del2CTa--a11B.1.2580.000067
ORF1ab/nsp31393L1393ICtaAta11B.1.2580.000067
ORF1ab/nsp31393L1393delCTA---11B.1.258.100.011364
ORF1ab/nsp31393L1393LCtaTta11B.1.258.190.007092
ORF1ab/nsp31393L1393LCtaTta11B.1.2650.001271
ORF1ab/nsp31393L1393LCtaTta11B.1.3250.006897
ORF1ab/nsp31393L1393LCtaTta11B.1.3360.002439
ORF1ab/nsp31393L1393delCTA---11B.1.3510.00003
ORF1ab/nsp31393L1393delCTA---11B.1.36.170.000494
ORF1ab/nsp31393L1393delCTA---11B.1.36.220.001208
ORF1ab/nsp31393L1393ICtaAta11B.1.36.280.005747
ORF1ab/nsp31393L1393LCtaTta11B.1.36.360.000602
ORF1ab/nsp31393L1393LCtaTta11B.1.36.380.001642
ORF1ab/nsp31393L1393LCtaTta11B.1.3610.001289
ORF1ab/nsp31393L1393LCtaTta11B.1.3670.000792
ORF1ab/nsp31393L1393LCtaTta11B.1.3690.000285
ORF1ab/nsp31393L1393LCtaTta11B.1.3710.001122
ORF1ab/nsp31393L1393LCtaTta11B.1.3780.006849
ORF1ab/nsp31393L1393LCtaTta11B.1.390.003906
ORF1ab/nsp31393L1393LCtaTta11B.1.3910.001127
ORF1ab/nsp31393L1393LCtaTta11B.1.3970.004854
ORF1ab/nsp31393L1393PcTAcCT11B.1.4150.014286
ORF1ab/nsp31393L1393LCtaTta11B.1.415.10.007576
ORF1ab/nsp31393L1393LCtaTta11B.1.4160.001269
ORF1ab/nsp31393L1393delCTA---11B.1.416.10.001563
ORF1ab/nsp31393L1393LCtaTta11B.1.4390.005917
ORF1ab/nsp31393L1393LCtaTta11B.1.4530.003236
ORF1ab/nsp31393L1393LCtaTta11B.1.4600.017857
ORF1ab/nsp31393L1393LCtaTta11B.1.4990.00105
ORF1ab/nsp31393L1393LCtaTta11B.1.5270.003704
ORF1ab/nsp31393L1393LCtaTta11B.1.5300.007143
ORF1ab/nsp31393L1393LCtaTta11B.1.5650.00081
ORF1ab/nsp31393L1393LCtaTta11B.1.5670.003333
ORF1ab/nsp31393L1393delCTA---11B.1.5750.000303
ORF1ab/nsp31393L1393RcTacGa11B.1.575.10.002439
ORF1ab/nsp31393L1393LCtaTta11B.1.5760.000907
ORF1ab/nsp31393L1393LCtaTta11B.1.5800.004065
ORF1ab/nsp31393L1393LCtaTta11B.1.6060.006024
ORF1ab/nsp31393L1393delCTA---11B.1.617.10.000129
ORF1ab/nsp31393L1393XCTATAG11B.1.617.20.000004
ORF1ab/nsp31393L1393RcTacGa11B.1.617.20.000004
ORF1ab/nsp31393L1393ICtaAta11B.1.619.10.000641
ORF1ab/nsp31393L1393delCTA---11B.1.6210.000089
ORF1ab/nsp31393L1393delCTA---11B.1.621.10.000506
ORF1ab/nsp31393L1393LCtaTta11B.1.6230.000536
ORF1ab/nsp31393L1393delCTA---11B.1.6300.005236
ORF1ab/nsp31393L1393delCTA---11B.1.6370.000073
ORF1ab/nsp31393L1393LCtaTta11B.1.80.001972
ORF1ab/nsp31393L1393LCtaTta11B.1.810.021277
ORF1ab/nsp31393L1393LCtaTta11B.1.9.50.005682
ORF1ab/nsp31393L1393LCtaTta11B.230.002924
ORF1ab/nsp31393L1393delCTA---11B.340.013699
ORF1ab/nsp31393L1393delCTA---11B.4.40.018868
ORF1ab/nsp31393L1393delCTA---11B.400.000364
ORF1ab/nsp31393L1393LCtaTta11B.60.00091
ORF1ab/nsp31393L1393ICtaAta11B.60.00091
ORF1ab/nsp31393L1393LCtaTta11C.260.007353
ORF1ab/nsp31393L1393LCtaTta11C.360.000911
ORF1ab/nsp31393L1393LCtaTta11C.36.30.000567
ORF1ab/nsp31393L1393XCTaTAa11L.30.003546
ORF1ab/nsp31393L1393VCtaGta11P.10.000016
ORF1ab/nsp31393L1393LCtaTta11P.1.120.000484
ORF1ab/nsp31393L1393ICtaAta11P.1.150.000232
ORF1ab/nsp31393L1393delCTA---11P.1.150.000232
ORF1ab/nsp31393L1393LCtaTta11P.1.170.000162
ORF1ab/nsp31393L1393LCtaTta11P.1.70.000319
ORF1ab/nsp31393L1393ICtaAta11P.1.70.000319
ORF1ab/nsp31393L1393VCtaGta11P.1.70.000319
ORF1ab/nsp31393L1393delCTA---11P.20.000187
ORF1ab/nsp31393L1393delCTA---11U.30.003861